RNA–Protein interactions for RNA: ENST00000535527.5

CHFR-210, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 746 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-210ENST00000535527 SDSP20132 328 aa15.83■□□□□ 0.12
CHFR-210ENST00000535527 SHROOM1Q2M3G4 852 aaPredicted RBP15.83■□□□□ 0.12
CHFR-210ENST00000535527 HABP4Q5JVS0 413 aaKnown RBP15.83■□□□□ 0.12
CHFR-210ENST00000535527 SLF2Q8IX21 1173 aa15.83■□□□□ 0.12
CHFR-210ENST00000535527 APPBP2Q92624 585 aa15.83■□□□□ 0.12
CHFR-210ENST00000535527 ZBTB47Q9UFB7 747 aaPredicted RBP15.83■□□□□ 0.12
CHFR-210ENST00000535527 UBE2Q2LH0YL09 131 aa15.82■□□□□ 0.12
CHFR-210ENST00000535527 IGSF3O75054 1194 aa15.82■□□□□ 0.12
CHFR-210ENST00000535527 USP2O75604 605 aaPredicted RBP15.82■□□□□ 0.12
CHFR-210ENST00000535527 TBC1D8O95759 1140 aa15.82■□□□□ 0.12
CHFR-210ENST00000535527 CYP2D6P10635 497 aa15.82■□□□□ 0.12
CHFR-210ENST00000535527 NMIQ13287 307 aaPredicted RBP15.82■□□□□ 0.12
CHFR-210ENST00000535527 TNFAIP1Q13829 316 aa15.82■□□□□ 0.12
CHFR-210ENST00000535527 ZNF589Q86UQ0 364 aaPredicted RBP15.82■□□□□ 0.12
CHFR-210ENST00000535527 EVI5LQ96CN4 794 aa15.82■□□□□ 0.12
CHFR-210ENST00000535527 CLMNQ96JQ2 1002 aa15.82■□□□□ 0.12
CHFR-210ENST00000535527 CFHR5Q9BXR6 569 aa15.82■□□□□ 0.12
CHFR-210ENST00000535527 TMOD2Q9NZR1 351 aa15.82■□□□□ 0.12
CHFR-210ENST00000535527 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.82■□□□□ 0.12
CHFR-210ENST00000535527 SAP30BPQ9UHR5 308 aaKnown RBP15.82■□□□□ 0.12
CHFR-210ENST00000535527 CYP2D7A0A087X1C5 515 aa15.81■□□□□ 0.12
CHFR-210ENST00000535527 NPM3O75607 178 aaKnown RBP15.81■□□□□ 0.12
CHFR-210ENST00000535527 JAG1P78504 1218 aa15.81■□□□□ 0.12
CHFR-210ENST00000535527 ERICH6BQ5W0A0 696 aa15.81■□□□□ 0.12
CHFR-210ENST00000535527 MIGA2Q7L4E1 593 aa15.81■□□□□ 0.12
CHFR-210ENST00000535527 STRBPQ96SI9 672 aaKnown RBP15.81■□□□□ 0.12
CHFR-210ENST00000535527 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.81■□□□□ 0.12
CHFR-210ENST00000535527 PALD1Q9ULE6 856 aa15.81■□□□□ 0.12
CHFR-210ENST00000535527 TRIM6-TRIM34B2RNG4 842 aa15.8■□□□□ 0.12
CHFR-210ENST00000535527 GPAA1O43292 621 aa15.8■□□□□ 0.12
CHFR-210ENST00000535527 GJA5P36382 358 aa15.8■□□□□ 0.12
CHFR-210ENST00000535527 MAP3K11Q16584 847 aa15.8■□□□□ 0.12
CHFR-210ENST00000535527 LDLRAD1Q5T700 205 aa15.8■□□□□ 0.12
CHFR-210ENST00000535527 VPS53Q5VIR6 699 aa15.8■□□□□ 0.12
CHFR-210ENST00000535527 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.8■□□□□ 0.12
CHFR-210ENST00000535527 CNKSR2Q8WXI2 1034 aa15.8■□□□□ 0.12
CHFR-210ENST00000535527 RILPL2Q969X0 211 aa15.8■□□□□ 0.12
CHFR-210ENST00000535527 DCP1AQ9NPI6 582 aaPredicted RBP15.8■□□□□ 0.12
CHFR-210ENST00000535527 ANGEL1Q9UNK9 670 aaKnown RBP15.8■□□□□ 0.12
CHFR-210ENST00000535527 MKI67P46013 3256 aaKnown RBP15.79■□□□□ 0.12
CHFR-210ENST00000535527 GSG1L2A8MUP6 293 aa15.79■□□□□ 0.12
CHFR-210ENST00000535527 FKTNO75072 461 aa15.79■□□□□ 0.12
CHFR-210ENST00000535527 BAG3O95817 575 aa15.79■□□□□ 0.12
CHFR-210ENST00000535527 INPP5BP32019 993 aa15.79■□□□□ 0.12
CHFR-210ENST00000535527 TNNI2P48788 182 aa15.79■□□□□ 0.12
CHFR-210ENST00000535527 SREBF2Q12772 1141 aa15.79■□□□□ 0.12
CHFR-210ENST00000535527 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.79■□□□□ 0.12
CHFR-210ENST00000535527 LOC285556D6RIA3 1793 aa15.78■□□□□ 0.12
CHFR-210ENST00000535527 PHF20L1A8MW92 1017 aa15.78■□□□□ 0.12
CHFR-210ENST00000535527 PLCD1P51178 756 aa15.78■□□□□ 0.12
CHFR-210ENST00000535527 MAP3K10Q02779 954 aa15.78■□□□□ 0.12
CHFR-210ENST00000535527 TMED8Q6PL24 325 aaPredicted RBP15.78■□□□□ 0.12
CHFR-210ENST00000535527 TACC3Q9Y6A5 838 aa15.78■□□□□ 0.12
CHFR-210ENST00000535527 SNCAIPQ9Y6H5 919 aa15.78■□□□□ 0.12
CHFR-210ENST00000535527 ZFYP08048 801 aaPredicted RBP15.77■□□□□ 0.12
CHFR-210ENST00000535527 PLCG2P16885 1265 aa15.77■□□□□ 0.12
CHFR-210ENST00000535527 ZSCAN25Q6NSZ9 544 aa15.77■□□□□ 0.12
CHFR-210ENST00000535527 CCDC84Q86UT8 332 aaPredicted RBP15.77■□□□□ 0.12
CHFR-210ENST00000535527 SLC44A5Q8NCS7 719 aa15.77■□□□□ 0.12
CHFR-210ENST00000535527 NOL10Q9BSC4 688 aaKnown RBP15.77■□□□□ 0.12
CHFR-210ENST00000535527 ZNF112Q9UJU3 913 aa15.77■□□□□ 0.12
CHFR-210ENST00000535527 ALDH1A1P00352 501 aa15.76■□□□□ 0.11
CHFR-210ENST00000535527 USP5P45974 858 aa15.76■□□□□ 0.11
CHFR-210ENST00000535527 VGLL4Q14135 290 aa15.76■□□□□ 0.11
CHFR-210ENST00000535527 METTL16Q86W50 562 aaKnown RBP15.76■□□□□ 0.11
CHFR-210ENST00000535527 NKX2-3Q8TAU0 364 aa15.76■□□□□ 0.11
CHFR-210ENST00000535527 ZKSCAN4Q969J2 545 aaPredicted RBP15.76■□□□□ 0.11
CHFR-210ENST00000535527 CRNKL1Q9BZJ0 848 aaKnown RBP15.76■□□□□ 0.11
CHFR-210ENST00000535527 SLC4A4Q9Y6R1 1079 aa15.76■□□□□ 0.11
CHFR-210ENST00000535527 NF2P35240 595 aa15.75■□□□□ 0.11
CHFR-210ENST00000535527 GABPAQ06546 454 aa15.75■□□□□ 0.11
CHFR-210ENST00000535527 TTLL12Q14166 644 aaPredicted RBP15.75■□□□□ 0.11
CHFR-210ENST00000535527 SUPT20HL1Q3ZLR7 823 aa15.75■□□□□ 0.11
CHFR-210ENST00000535527 ZSCAN29Q8IWY8 852 aaPredicted RBP15.75■□□□□ 0.11
CHFR-210ENST00000535527 DYNLL2Q96FJ2 89 aa15.75■□□□□ 0.11
CHFR-210ENST00000535527 PARP14Q460N5 1801 aa15.74■□□□□ 0.11
CHFR-210ENST00000535527 CHMLP26374 656 aa15.74■□□□□ 0.11
CHFR-210ENST00000535527 INHBEP58166 350 aa15.74■□□□□ 0.11
CHFR-210ENST00000535527 CTR9Q6PD62 1173 aa15.74■□□□□ 0.11
CHFR-210ENST00000535527 WRNIP1Q96S55 665 aa15.74■□□□□ 0.11
CHFR-210ENST00000535527 MCM9Q9NXL9 1143 aa15.74■□□□□ 0.11
CHFR-210ENST00000535527 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.74■□□□□ 0.11
CHFR-210ENST00000535527 MYH4Q9Y623 1939 aa15.74■□□□□ 0.11
CHFR-210ENST00000535527 ROBO3Q96MS0 1386 aa15.74■□□□□ 0.11
CHFR-210ENST00000535527 CCDC171Q6TFL3 1326 aa15.73■□□□□ 0.11
CHFR-210ENST00000535527 SHMT1P34896 483 aa15.73■□□□□ 0.11
CHFR-210ENST00000535527 MKRN3Q13064 507 aaKnown RBP15.73■□□□□ 0.11
CHFR-210ENST00000535527 CWC27Q6UX04 472 aaKnown RBP15.73■□□□□ 0.11
CHFR-210ENST00000535527 ZNF341Q9BYN7 854 aa15.73■□□□□ 0.11
CHFR-210ENST00000535527 NBPF3Q9H094 633 aa15.73■□□□□ 0.11
CHFR-210ENST00000535527 ELP3Q9H9T3 547 aa15.73■□□□□ 0.11
CHFR-210ENST00000535527 HELLSQ9NRZ9 838 aa15.73■□□□□ 0.11
CHFR-210ENST00000535527 HTTP42858 3142 aa15.73■□□□□ 0.11
CHFR-210ENST00000535527 ZSWIM8A7E2V4 1837 aa15.73■□□□□ 0.11
CHFR-210ENST00000535527 USP17L12C9JPN9 530 aa15.72■□□□□ 0.11
CHFR-210ENST00000535527 USP17L21D6R901 530 aa15.72■□□□□ 0.11
CHFR-210ENST00000535527 BMP2KLQ5H9B9 411 aa15.72■□□□□ 0.11
CHFR-210ENST00000535527 C12orf60Q5U649 245 aa15.72■□□□□ 0.11
CHFR-210ENST00000535527 ARMC9Q7Z3E5 817 aa15.72■□□□□ 0.11
CHFR-210ENST00000535527 CERS3Q8IU89 383 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms