RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 PAK6Q9NQU5 681 aaPredicted RBP12.43□□□□□ -0.42
CLSTN3-203ENST00000534830 USP40Q9NVE5 1235 aa12.43□□□□□ -0.42
CLSTN3-203ENST00000534830 ATRNL1Q5VV63 1379 aa12.43□□□□□ -0.42
CLSTN3-203ENST00000534830 MYO5AQ9Y4I1 1855 aaKnown RBP12.42□□□□□ -0.42
CLSTN3-203ENST00000534830 RPTORQ8N122 1335 aa12.42□□□□□ -0.42
CLSTN3-203ENST00000534830 TNPO2O14787 897 aaKnown RBP12.42□□□□□ -0.42
CLSTN3-203ENST00000534830 TCP10Q12799 353 aa12.42□□□□□ -0.42
CLSTN3-203ENST00000534830 G3BP1Q13283 466 aaKnown RBP eCLIP12.42□□□□□ -0.42
CLSTN3-203ENST00000534830 GPR108Q9NPR9 543 aa12.42□□□□□ -0.42
CLSTN3-203ENST00000534830 PRDM6Q9NQX0 595 aa12.42□□□□□ -0.42
CLSTN3-203ENST00000534830 HMG20BQ9P0W2 317 aa12.42□□□□□ -0.42
CLSTN3-203ENST00000534830 KCNH4Q9UQ05 1017 aa12.42□□□□□ -0.42
CLSTN3-203ENST00000534830 GPR75-ASB3A0A0A6YYF3 556 aa12.41□□□□□ -0.42
CLSTN3-203ENST00000534830 ENTPD3O75355 529 aa12.41□□□□□ -0.42
CLSTN3-203ENST00000534830 IRF5Q13568 498 aa12.41□□□□□ -0.42
CLSTN3-203ENST00000534830 MOGSQ13724 837 aa12.41□□□□□ -0.42
CLSTN3-203ENST00000534830 NOL9Q5SY16 702 aaKnown RBP12.41□□□□□ -0.42
CLSTN3-203ENST00000534830 SPTY2D1Q68D10 685 aaPredicted RBP12.41□□□□□ -0.42
CLSTN3-203ENST00000534830 SH3BP5LQ7L8J4 393 aa12.41□□□□□ -0.42
CLSTN3-203ENST00000534830 DOCK3Q8IZD9 2030 aa12.41□□□□□ -0.42
CLSTN3-203ENST00000534830 FAM161BQ96MY7 647 aa12.41□□□□□ -0.42
CLSTN3-203ENST00000534830 NEUROD6Q96NK8 337 aa12.41□□□□□ -0.42
CLSTN3-203ENST00000534830 NBPF3Q9H094 633 aa12.41□□□□□ -0.42
CLSTN3-203ENST00000534830 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.41□□□□□ -0.426e-7■■■■□ 21.6
CLSTN3-203ENST00000534830 ABCF2Q9UG63 623 aa12.41□□□□□ -0.42
CLSTN3-203ENST00000534830 NOP58Q9Y2X3 529 aaKnown RBP12.41□□□□□ -0.42
CLSTN3-203ENST00000534830 PHIPQ8WWQ0 1821 aa12.41□□□□□ -0.42
CLSTN3-203ENST00000534830 MROH7-TTC4A0A0A0MT08 1334 aa12.4□□□□□ -0.42
CLSTN3-203ENST00000534830 PHF20L1A8MW92 1017 aa12.4□□□□□ -0.42
CLSTN3-203ENST00000534830 MCAMP43121 646 aa12.4□□□□□ -0.42
CLSTN3-203ENST00000534830 RHBDL3P58872 404 aa12.4□□□□□ -0.42
CLSTN3-203ENST00000534830 MECOMQ03112 1051 aa12.4□□□□□ -0.42
CLSTN3-203ENST00000534830 GPAT2Q6NUI2 795 aa12.4□□□□□ -0.42
CLSTN3-203ENST00000534830 PI16Q6UXB8 463 aa12.4□□□□□ -0.42
CLSTN3-203ENST00000534830 ERICH6Q7L0X2 663 aa12.4□□□□□ -0.42
CLSTN3-203ENST00000534830 SLF2Q8IX21 1173 aa12.4□□□□□ -0.42
CLSTN3-203ENST00000534830 ANKLE1Q8NAG6 615 aa12.4□□□□□ -0.42
CLSTN3-203ENST00000534830 SPATA5Q8NB90 893 aa12.4□□□□□ -0.42
CLSTN3-203ENST00000534830 NSUN4Q96CB9 384 aaKnown RBP12.4□□□□□ -0.42
CLSTN3-203ENST00000534830 DDX4Q9NQI0 724 aaKnown RBP12.4□□□□□ -0.42
CLSTN3-203ENST00000534830 PTPRFP10586 1907 aa12.4□□□□□ -0.42
CLSTN3-203ENST00000534830 CDK5RAP2Q96SN8 1893 aa12.4□□□□□ -0.42
CLSTN3-203ENST00000534830 NPM3O75607 178 aaKnown RBP12.39□□□□□ -0.43
CLSTN3-203ENST00000534830 BTDP43251 543 aa12.39□□□□□ -0.43
CLSTN3-203ENST00000534830 RGS3P49796 1198 aa12.39□□□□□ -0.43
CLSTN3-203ENST00000534830 TNNI3KQ59H18 835 aa12.39□□□□□ -0.43
CLSTN3-203ENST00000534830 GADL1Q6ZQY3 521 aa12.39□□□□□ -0.43
CLSTN3-203ENST00000534830 DZIP1Q86YF9 867 aaKnown RBP12.39□□□□□ -0.43
CLSTN3-203ENST00000534830 COA7Q96BR5 231 aa12.39□□□□□ -0.43
CLSTN3-203ENST00000534830 GUCD1Q96NT3 240 aa12.39□□□□□ -0.43
CLSTN3-203ENST00000534830 FPGT-TNNI3KV9GXZ4 949 aa12.39□□□□□ -0.43
CLSTN3-203ENST00000534830 DDTLA6NHG4 134 aaPredicted RBP12.38□□□□□ -0.43
CLSTN3-203ENST00000534830 CXCL11O14625 94 aa12.38□□□□□ -0.43
CLSTN3-203ENST00000534830 MAP4K4O95819 1239 aaPredicted RBP12.38□□□□□ -0.43
CLSTN3-203ENST00000534830 UQCRFS1P1P0C7P4 283 aa12.38□□□□□ -0.43
CLSTN3-203ENST00000534830 TBC1D9Q6ZT07 1266 aa12.38□□□□□ -0.43
CLSTN3-203ENST00000534830 FASTKD5Q7L8L6 764 aaKnown RBP12.38□□□□□ -0.43
CLSTN3-203ENST00000534830 ITPRIPQ8IWB1 547 aa12.38□□□□□ -0.43
CLSTN3-203ENST00000534830 FTSJ3Q8IY81 847 aaKnown RBP12.38□□□□□ -0.43
CLSTN3-203ENST00000534830 SMCR8Q8TEV9 937 aaPredicted RBP12.38□□□□□ -0.43
CLSTN3-203ENST00000534830 ZNF512BQ96KM6 892 aaPredicted RBP12.38□□□□□ -0.43
CLSTN3-203ENST00000534830 C11orf49Q9H6J7 331 aa12.38□□□□□ -0.43
CLSTN3-203ENST00000534830 C1orf115Q9H7X2 142 aa12.38□□□□□ -0.43
CLSTN3-203ENST00000534830 FOCADQ5VW36 1801 aa12.38□□□□□ -0.43
CLSTN3-203ENST00000534830 EYSQ5T1H1 3165 aa12.38□□□□□ -0.43
CLSTN3-203ENST00000534830 DOCK1Q14185 1865 aa12.38□□□□□ -0.43
CLSTN3-203ENST00000534830 DDX60LQ5H9U9 1706 aaKnown RBP12.37□□□□□ -0.43
CLSTN3-203ENST00000534830 POTEB2H3BUK9 544 aa12.37□□□□□ -0.43
CLSTN3-203ENST00000534830 TBC1D12O60347 775 aa12.37□□□□□ -0.43
CLSTN3-203ENST00000534830 MDM2Q00987 491 aaPredicted RBP12.37□□□□□ -0.43
CLSTN3-203ENST00000534830 GORABQ5T7V8 394 aa12.37□□□□□ -0.43
CLSTN3-203ENST00000534830 CEP85Q6P2H3 762 aa12.37□□□□□ -0.43
CLSTN3-203ENST00000534830 DBNDD2Q9BQY9 259 aa12.37□□□□□ -0.43
CLSTN3-203ENST00000534830 ZHX2Q9Y6X8 837 aa12.37□□□□□ -0.43
CLSTN3-203ENST00000534830 MAST2Q6P0Q8 1798 aa12.36□□□□□ -0.43
CLSTN3-203ENST00000534830 COL2A1P02458 1487 aaPredicted RBP12.36□□□□□ -0.43
CLSTN3-203ENST00000534830 IGSF3O75054 1194 aa12.36□□□□□ -0.43
CLSTN3-203ENST00000534830 SURF6O75683 361 aaKnown RBP12.36□□□□□ -0.43
CLSTN3-203ENST00000534830 LDHCP07864 332 aa12.36□□□□□ -0.43
CLSTN3-203ENST00000534830 SLURP2P0DP57 97 aa12.36□□□□□ -0.43
CLSTN3-203ENST00000534830 GSTO1P78417 241 aa12.36□□□□□ -0.43
CLSTN3-203ENST00000534830 FAM109BQ6ICB4 259 aaPredicted RBP12.36□□□□□ -0.43
CLSTN3-203ENST00000534830 ANKRD13CQ8N6S4 541 aa12.36□□□□□ -0.43
CLSTN3-203ENST00000534830 HMX1Q9NP08 348 aaPredicted RBP12.36□□□□□ -0.43
CLSTN3-203ENST00000534830 SIPA1L1O43166 1804 aa12.36□□□□□ -0.43
CLSTN3-203ENST00000534830 ATAD5Q96QE3 1844 aa12.36□□□□□ -0.43
CLSTN3-203ENST00000534830 LAMA2P24043 3122 aaKnown RBP12.36□□□□□ -0.43
CLSTN3-203ENST00000534830 A0A0G2JLL6 359 aaPredicted RBP12.35□□□□□ -0.43
CLSTN3-203ENST00000534830 HMGCRP04035 888 aa12.35□□□□□ -0.43
CLSTN3-203ENST00000534830 CYP2E1P05181 493 aaPredicted RBP12.35□□□□□ -0.43
CLSTN3-203ENST00000534830 PTPRAP18433 802 aa12.35□□□□□ -0.43
CLSTN3-203ENST00000534830 PRRT2Q7Z6L0 340 aaPredicted RBP12.35□□□□□ -0.43
CLSTN3-203ENST00000534830 SCYL3Q8IZE3 742 aa12.35□□□□□ -0.43
CLSTN3-203ENST00000534830 PANK1Q8TE04 598 aa12.35□□□□□ -0.43
CLSTN3-203ENST00000534830 EAF2Q96CJ1 260 aaPredicted RBP12.35□□□□□ -0.43
CLSTN3-203ENST00000534830 PICK1Q9NRD5 415 aa12.35□□□□□ -0.43
CLSTN3-203ENST00000534830 DBNLQ9UJU6 430 aaKnown RBP12.35□□□□□ -0.43
CLSTN3-203ENST00000534830 AFG3L2Q9Y4W6 797 aa12.35□□□□□ -0.43
CLSTN3-203ENST00000534830 PRUNE2Q8WUY3 3088 aa12.35□□□□□ -0.43
CLSTN3-203ENST00000534830 SPTBN5Q9NRC6 3674 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms