RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 GCLCP48506 637 aaPredicted RBP12.65□□□□□ -0.38
CSDE1-217ENST00000534699 DDX4Q9NQI0 724 aaKnown RBP12.65□□□□□ -0.38
CSDE1-217ENST00000534699 FZD1Q9UP38 647 aa12.65□□□□□ -0.38
CSDE1-217ENST00000534699 DDTLA6NHG4 134 aaPredicted RBP12.65□□□□□ -0.39
CSDE1-217ENST00000534699 USP17L5A8MUK1 530 aa12.65□□□□□ -0.39
CSDE1-217ENST00000534699 ASNSP08243 561 aa12.65□□□□□ -0.39
CSDE1-217ENST00000534699 CAP2P40123 477 aa12.65□□□□□ -0.39
CSDE1-217ENST00000534699 MIGA2Q7L4E1 593 aa12.65□□□□□ -0.39
CSDE1-217ENST00000534699 TTC6Q86TZ1 520 aa12.65□□□□□ -0.39
CSDE1-217ENST00000534699 PANK1Q8TE04 598 aa12.65□□□□□ -0.39
CSDE1-217ENST00000534699 AGTPBP1Q9UPW5 1226 aa12.65□□□□□ -0.39
CSDE1-217ENST00000534699 NAV1Q8NEY1 1877 aa12.64□□□□□ -0.39
CSDE1-217ENST00000534699 ZAP70P43403 619 aa12.64□□□□□ -0.39
CSDE1-217ENST00000534699 LACTBP83111 547 aaPredicted RBP12.64□□□□□ -0.39
CSDE1-217ENST00000534699 ZSCAN25Q6NSZ9 544 aa12.64□□□□□ -0.39
CSDE1-217ENST00000534699 AACSQ86V21 672 aa12.64□□□□□ -0.39
CSDE1-217ENST00000534699 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.64□□□□□ -0.39
CSDE1-217ENST00000534699 PDHXO00330 501 aa12.64□□□□□ -0.39
CSDE1-217ENST00000534699 IFIT2P09913 472 aaKnown RBP12.64□□□□□ -0.39
CSDE1-217ENST00000534699 ATP5JP18859 108 aa12.64□□□□□ -0.39
CSDE1-217ENST00000534699 GPAT2Q6NUI2 795 aa12.64□□□□□ -0.39
CSDE1-217ENST00000534699 CD99L2Q8TCZ2 262 aa12.64□□□□□ -0.39
CSDE1-217ENST00000534699 R3HDMLQ9H3Y0 253 aa12.64□□□□□ -0.39
CSDE1-217ENST00000534699 BCRP11274 1271 aa12.63□□□□□ -0.39
CSDE1-217ENST00000534699 ZFPM1Q8IX07 1006 aa12.63□□□□□ -0.39
CSDE1-217ENST00000534699 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.63□□□□□ -0.399e-6■□□□□ 8.3
CSDE1-217ENST00000534699 CEP350Q5VT06 3117 aa12.63□□□□□ -0.39
CSDE1-217ENST00000534699 OSBPP22059 807 aa12.63□□□□□ -0.39
CSDE1-217ENST00000534699 CYP7A1P22680 504 aa12.63□□□□□ -0.39
CSDE1-217ENST00000534699 LRRFIP1Q32MZ4 808 aaKnown RBP12.63□□□□□ -0.39
CSDE1-217ENST00000534699 ZNF280CQ8ND82 737 aa12.63□□□□□ -0.39
CSDE1-217ENST00000534699 TRIM34Q9BYJ4 488 aa12.63□□□□□ -0.39
CSDE1-217ENST00000534699 FLT1P17948 1338 aa12.62□□□□□ -0.39
CSDE1-217ENST00000534699 FCGRTP55899 365 aa12.62□□□□□ -0.39
CSDE1-217ENST00000534699 SH3RF3Q8TEJ3 882 aaPredicted RBP12.62□□□□□ -0.39
CSDE1-217ENST00000534699 CNKSR2Q8WXI2 1034 aa12.62□□□□□ -0.39
CSDE1-217ENST00000534699 C1orf115Q9H7X2 142 aa12.62□□□□□ -0.39
CSDE1-217ENST00000534699 PIH1D3Q9NQM4 214 aaKnown RBP12.62□□□□□ -0.39
CSDE1-217ENST00000534699 ZHX2Q9Y6X8 837 aa12.62□□□□□ -0.39
CSDE1-217ENST00000534699 PICALMQ13492 652 aa12.62□□□□□ -0.39
CSDE1-217ENST00000534699 IRF5Q13568 498 aa12.62□□□□□ -0.39
CSDE1-217ENST00000534699 TBC1D9Q6ZT07 1266 aa12.62□□□□□ -0.39
CSDE1-217ENST00000534699 NKX2-3Q8TAU0 364 aa12.62□□□□□ -0.39
CSDE1-217ENST00000534699 HOXA7P31268 230 aaPredicted RBP12.61□□□□□ -0.39
CSDE1-217ENST00000534699 GPATCH3Q96I76 525 aa12.61□□□□□ -0.39
CSDE1-217ENST00000534699 CRNKL1Q9BZJ0 848 aaKnown RBP12.61□□□□□ -0.39
CSDE1-217ENST00000534699 CCDC8Q9H0W5 538 aaPredicted RBP12.61□□□□□ -0.39
CSDE1-217ENST00000534699 TATDN1Q6P1N9 297 aa12.61□□□□□ -0.39
CSDE1-217ENST00000534699 C12orf42Q96LP6 360 aa12.61□□□□□ -0.39
CSDE1-217ENST00000534699 LRRCC1Q9C099 1032 aa12.61□□□□□ -0.39
CSDE1-217ENST00000534699 SRRDQ9UH36 339 aa12.61□□□□□ -0.39
CSDE1-217ENST00000534699 COG6Q9Y2V7 657 aa12.61□□□□□ -0.39
CSDE1-217ENST00000534699 PI16Q6UXB8 463 aa12.6□□□□□ -0.39
CSDE1-217ENST00000534699 TRMT44Q8IYL2 757 aaKnown RBP12.6□□□□□ -0.39
CSDE1-217ENST00000534699 TRIM47Q96LD4 638 aa12.6□□□□□ -0.39
CSDE1-217ENST00000534699 HAUS7Q99871 368 aa12.6□□□□□ -0.39
CSDE1-217ENST00000534699 TMEM106CQ9BVX2 250 aa12.6□□□□□ -0.39
CSDE1-217ENST00000534699 AATFQ9NY61 560 aaKnown RBP eCLIP12.6□□□□□ -0.39
CSDE1-217ENST00000534699 SWAP70Q9UH65 585 aa12.6□□□□□ -0.39
CSDE1-217ENST00000534699 EXOC6BQ9Y2D4 811 aa12.6□□□□□ -0.39
CSDE1-217ENST00000534699 USP14P54578 494 aa12.6□□□□□ -0.39
CSDE1-217ENST00000534699 UBE3CQ15386 1083 aa12.6□□□□□ -0.39
CSDE1-217ENST00000534699 FAM110CQ1W6H9 321 aa12.6□□□□□ -0.39
CSDE1-217ENST00000534699 CRACR2BQ8N4Y2 399 aaPredicted RBP12.6□□□□□ -0.39
CSDE1-217ENST00000534699 SLAIN1Q8ND83 568 aa12.6□□□□□ -0.39
CSDE1-217ENST00000534699 PXYLP1Q8TE99 480 aa12.6□□□□□ -0.39
CSDE1-217ENST00000534699 ZNF333Q96JL9 665 aa12.6□□□□□ -0.39
CSDE1-217ENST00000534699 ATP8A2Q9NTI2 1148 aa12.6□□□□□ -0.39
CSDE1-217ENST00000534699 MORF4L1Q9UBU8 362 aa12.6□□□□□ -0.39
CSDE1-217ENST00000534699 MAGEB6P1A0A0J9YX57 407 aa12.59□□□□□ -0.39
CSDE1-217ENST00000534699 USP5P45974 858 aa12.59□□□□□ -0.39
CSDE1-217ENST00000534699 USP17L2Q6R6M4 530 aa12.59□□□□□ -0.39
CSDE1-217ENST00000534699 SIRT2Q8IXJ6 389 aa12.59□□□□□ -0.39
CSDE1-217ENST00000534699 TGFBRAP1Q8WUH2 860 aa12.59□□□□□ -0.39
CSDE1-217ENST00000534699 DCTPP1Q9H773 170 aa12.59□□□□□ -0.39
CSDE1-217ENST00000534699 TMOD4Q9NZQ9 345 aa12.59□□□□□ -0.39
CSDE1-217ENST00000534699 IDH1O75874 414 aaKnown RBP12.59□□□□□ -0.39
CSDE1-217ENST00000534699 MAGEB6Q8N7X4 407 aa12.59□□□□□ -0.39
CSDE1-217ENST00000534699 SNRKQ9NRH2 765 aa12.59□□□□□ -0.39
CSDE1-217ENST00000534699 MYH8P13535 1937 aa12.58□□□□□ -0.4
CSDE1-217ENST00000534699 GIMAP6Q6P9H5 292 aa12.58□□□□□ -0.4
CSDE1-217ENST00000534699 RIOK1Q9BRS2 568 aaKnown RBP12.58□□□□□ -0.4
CSDE1-217ENST00000534699 ZFYP08048 801 aaPredicted RBP12.58□□□□□ -0.4
CSDE1-217ENST00000534699 BACE1P56817 501 aa12.58□□□□□ -0.4
CSDE1-217ENST00000534699 UBXN2AP68543 259 aa12.58□□□□□ -0.4
CSDE1-217ENST00000534699 AMOTL1Q8IY63 956 aa12.58□□□□□ -0.4
CSDE1-217ENST00000534699 GCC1Q96CN9 775 aa12.58□□□□□ -0.4
CSDE1-217ENST00000534699 TLR7Q9NYK1 1049 aaKnown RBP12.58□□□□□ -0.4
CSDE1-217ENST00000534699 SERPINB13Q9UIV8 391 aa12.58□□□□□ -0.4
CSDE1-217ENST00000534699 TTC41PQ6P2S7 1318 aa12.58□□□□□ -0.4
CSDE1-217ENST00000534699 PDE6AP16499 860 aa12.57□□□□□ -0.4
CSDE1-217ENST00000534699 SLC9C1Q4G0N8 1177 aa12.57□□□□□ -0.4
CSDE1-217ENST00000534699 GADL1Q6ZQY3 521 aa12.57□□□□□ -0.4
CSDE1-217ENST00000534699 DDRGK1Q96HY6 314 aa12.57□□□□□ -0.4
CSDE1-217ENST00000534699 CCDC17Q96LX7 622 aa12.57□□□□□ -0.4
CSDE1-217ENST00000534699 CABP5Q9NP86 173 aa12.57□□□□□ -0.4
CSDE1-217ENST00000534699 PAG1Q9NWQ8 432 aa12.57□□□□□ -0.4
CSDE1-217ENST00000534699 USP17L10C9JJH3 530 aa12.57□□□□□ -0.4
CSDE1-217ENST00000534699 LBX2Q6XYB7 198 aa12.57□□□□□ -0.4
CSDE1-217ENST00000534699 TCRBV5S4A2TA0A5A2 114 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms