RNA–Protein interactions for RNA: ENST00000534149.5

CTSB-230, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-230ENST00000534149 XAGE2Q96GT9 111 aa18.51■□□□□ 0.55
CTSB-230ENST00000534149 TBC1D12O60347 775 aa18.5■□□□□ 0.55
CTSB-230ENST00000534149 HMGCS2P54868 508 aa18.5■□□□□ 0.55
CTSB-230ENST00000534149 NECAB2Q7Z6G3 386 aa18.5■□□□□ 0.55
CTSB-230ENST00000534149 CDCA7LQ96GN5 454 aa18.5■□□□□ 0.55
CTSB-230ENST00000534149 MEIS3Q99687 375 aa18.5■□□□□ 0.55
CTSB-230ENST00000534149 OSBPL5Q9H0X9 879 aaPredicted RBP18.5■□□□□ 0.55
CTSB-230ENST00000534149 NOB1Q9ULX3 412 aaKnown RBP18.5■□□□□ 0.55
CTSB-230ENST00000534149 ZNF316A6NFI3 1004 aaPredicted RBP18.49■□□□□ 0.55
CTSB-230ENST00000534149 HMGCRP04035 888 aa18.49■□□□□ 0.55
CTSB-230ENST00000534149 TFCP2Q12800 502 aa18.49■□□□□ 0.55
CTSB-230ENST00000534149 TRIM32Q13049 653 aa18.49■□□□□ 0.55
CTSB-230ENST00000534149 PI16Q6UXB8 463 aa18.49■□□□□ 0.55
CTSB-230ENST00000534149 C7orf61Q8IZ16 206 aa18.49■□□□□ 0.55
CTSB-230ENST00000534149 ZNF280CQ8ND82 737 aa18.49■□□□□ 0.55
CTSB-230ENST00000534149 NPM3O75607 178 aaKnown RBP18.48■□□□□ 0.55
CTSB-230ENST00000534149 GCLCP48506 637 aaPredicted RBP18.48■□□□□ 0.55
CTSB-230ENST00000534149 RRP1BQ14684 758 aaKnown RBP18.48■□□□□ 0.55
CTSB-230ENST00000534149 MVPQ14764 893 aaKnown RBP18.48■□□□□ 0.55
CTSB-230ENST00000534149 ASCC2Q9H1I8 757 aaPredicted RBP18.48■□□□□ 0.55
CTSB-230ENST00000534149 ZMYND8Q9ULU4 1186 aaPredicted RBP18.48■□□□□ 0.55
CTSB-230ENST00000534149 HDAC5Q9UQL6 1122 aa18.48■□□□□ 0.55
CTSB-230ENST00000534149 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.48■□□□□ 0.55
CTSB-230ENST00000534149 PLXNB2O15031 1838 aa18.48■□□□□ 0.55
CTSB-230ENST00000534149 DDX60LQ5H9U9 1706 aaKnown RBP18.48■□□□□ 0.55
CTSB-230ENST00000534149 COL2A1P02458 1487 aaPredicted RBP18.47■□□□□ 0.55
CTSB-230ENST00000534149 DLL1O00548 723 aa18.47■□□□□ 0.55
CTSB-230ENST00000534149 PABPC4Q13310 644 aaKnown RBP eCLIP18.47■□□□□ 0.55
CTSB-230ENST00000534149 TBC1D9Q6ZT07 1266 aa18.47■□□□□ 0.55
CTSB-230ENST00000534149 NSUN4Q96CB9 384 aaKnown RBP18.47■□□□□ 0.55
CTSB-230ENST00000534149 API5Q9BZZ5 524 aaKnown RBP18.47■□□□□ 0.55
CTSB-230ENST00000534149 HMG20BQ9P0W2 317 aa18.47■□□□□ 0.55
CTSB-230ENST00000534149 GJD2Q9UKL4 321 aa18.47■□□□□ 0.55
CTSB-230ENST00000534149 AKAP2Q9Y2D5 859 aa18.47■□□□□ 0.55
CTSB-230ENST00000534149 SRGAP3O43295 1099 aa18.46■□□□□ 0.55
CTSB-230ENST00000534149 CAP2P40123 477 aa18.46■□□□□ 0.55
CTSB-230ENST00000534149 ANKLE1Q8NAG6 615 aa18.46■□□□□ 0.55
CTSB-230ENST00000534149 NEUROD6Q96NK8 337 aa18.46■□□□□ 0.55
CTSB-230ENST00000534149 GDF15Q99988 308 aa18.46■□□□□ 0.55
CTSB-230ENST00000534149 TBC1D2Q9BYX2 928 aa18.46■□□□□ 0.55
CTSB-230ENST00000534149 HMX1Q9NP08 348 aaPredicted RBP18.46■□□□□ 0.55
CTSB-230ENST00000534149 RPTORQ8N122 1335 aa18.46■□□□□ 0.55
CTSB-230ENST00000534149 A0A0C4DFX4 3053 aa18.46■□□□□ 0.54
CTSB-230ENST00000534149 SIPA1L1O43166 1804 aa18.45■□□□□ 0.54
CTSB-230ENST00000534149 USP17L5A8MUK1 530 aa18.45■□□□□ 0.54
CTSB-230ENST00000534149 LDHCP07864 332 aa18.45■□□□□ 0.54
CTSB-230ENST00000534149 MNX1P50219 401 aaPredicted RBP18.45■□□□□ 0.54
CTSB-230ENST00000534149 GSTO1P78417 241 aa18.45■□□□□ 0.54
CTSB-230ENST00000534149 SPATA5Q8NB90 893 aa18.45■□□□□ 0.54
CTSB-230ENST00000534149 RAI14Q9P0K7 980 aa18.45■□□□□ 0.54
CTSB-230ENST00000534149 SYN1P17600 705 aa18.44■□□□□ 0.54
CTSB-230ENST00000534149 SH3D19Q5HYK7 790 aa18.44■□□□□ 0.54
CTSB-230ENST00000534149 TEX11Q8IYF3 940 aa18.44■□□□□ 0.54
CTSB-230ENST00000534149 TRIB2Q92519 343 aa18.44■□□□□ 0.54
CTSB-230ENST00000534149 NBPF3Q9H094 633 aa18.44■□□□□ 0.54
CTSB-230ENST00000534149 PEX10O60683 326 aa18.43■□□□□ 0.54
CTSB-230ENST00000534149 MAP4K4O95819 1239 aaPredicted RBP18.43■□□□□ 0.54
CTSB-230ENST00000534149 CYP2B6P20813 491 aa18.43■□□□□ 0.54
CTSB-230ENST00000534149 BMP8BP34820 402 aa18.43■□□□□ 0.54
CTSB-230ENST00000534149 IRX3P78415 501 aaPredicted RBP18.43■□□□□ 0.54
CTSB-230ENST00000534149 MTMR2Q13614 643 aa18.43■□□□□ 0.54
CTSB-230ENST00000534149 GORABQ5T7V8 394 aa18.43■□□□□ 0.54
CTSB-230ENST00000534149 SH3RF3Q8TEJ3 882 aaPredicted RBP18.43■□□□□ 0.54
CTSB-230ENST00000534149 C11orf49Q9H6J7 331 aa18.43■□□□□ 0.54
CTSB-230ENST00000534149 AS3MTQ9HBK9 375 aa18.43■□□□□ 0.54
CTSB-230ENST00000534149 MORF4L1Q9UBU8 362 aa18.43■□□□□ 0.54
CTSB-230ENST00000534149 HERC5Q9UII4 1024 aaKnown RBP18.43■□□□□ 0.54
CTSB-230ENST00000534149 ARID4AP29374 1257 aaPredicted RBP18.42■□□□□ 0.54
CTSB-230ENST00000534149 TRMT2AQ8IZ69 625 aaKnown RBP18.42■□□□□ 0.54
CTSB-230ENST00000534149 CUL9Q8IWT3 2517 aa18.41■□□□□ 0.54
CTSB-230ENST00000534149 GNAI3P08754 354 aa18.41■□□□□ 0.54
CTSB-230ENST00000534149 CT47B1P0C2W7 299 aaPredicted RBP18.41■□□□□ 0.54
CTSB-230ENST00000534149 PRKAR2AP13861 404 aaKnown RBP18.41■□□□□ 0.54
CTSB-230ENST00000534149 MCAMP43121 646 aa18.41■□□□□ 0.54
CTSB-230ENST00000534149 MAGEA10P43363 369 aaPredicted RBP18.41■□□□□ 0.54
CTSB-230ENST00000534149 MTX1Q13505 466 aa18.41■□□□□ 0.54
CTSB-230ENST00000534149 LRP2BPQ9P2M1 347 aa18.41■□□□□ 0.54
CTSB-230ENST00000534149 OGDHLQ9ULD0 1010 aa18.41■□□□□ 0.54
CTSB-230ENST00000534149 CDK5RAP2Q96SN8 1893 aa18.41■□□□□ 0.54
CTSB-230ENST00000534149 MAST2Q6P0Q8 1798 aa18.4■□□□□ 0.54
CTSB-230ENST00000534149 BACE1P56817 501 aa18.4■□□□□ 0.54
CTSB-230ENST00000534149 JAG1P78504 1218 aa18.4■□□□□ 0.54
CTSB-230ENST00000534149 SHROOM1Q2M3G4 852 aaPredicted RBP18.4■□□□□ 0.54
CTSB-230ENST00000534149 MAP3K21Q5TCX8 1036 aa18.4■□□□□ 0.54
CTSB-230ENST00000534149 Q7L0L9 218 aa18.4■□□□□ 0.54
CTSB-230ENST00000534149 P2RX7Q99572 595 aaKnown RBP18.4■□□□□ 0.54
CTSB-230ENST00000534149 NUDT12Q9BQG2 462 aa18.4■□□□□ 0.54
CTSB-230ENST00000534149 WDR18Q9BV38 432 aa18.4■□□□□ 0.54
CTSB-230ENST00000534149 TXNRD2Q9NNW7 524 aa18.4■□□□□ 0.54
CTSB-230ENST00000534149 TMOD4Q9NZQ9 345 aa18.4■□□□□ 0.54
CTSB-230ENST00000534149 PI4KBQ9UBF8 816 aa18.4■□□□□ 0.54
CTSB-230ENST00000534149 PFASO15067 1338 aa18.4■□□□□ 0.54
CTSB-230ENST00000534149 HERVK_113P62684 666 aa18.39■□□□□ 0.53
CTSB-230ENST00000534149 DEFB123Q8N688 67 aa18.39■□□□□ 0.53
CTSB-230ENST00000534149 NOL10Q9BSC4 688 aaKnown RBP18.39■□□□□ 0.53
CTSB-230ENST00000534149 DNAJC18Q9H819 358 aa18.39■□□□□ 0.53
CTSB-230ENST00000534149 AATFQ9NY61 560 aaKnown RBP eCLIP18.39■□□□□ 0.53
CTSB-230ENST00000534149 FOCADQ5VW36 1801 aa18.39■□□□□ 0.53
CTSB-230ENST00000534149 GDF11O95390 407 aa18.38■□□□□ 0.53
CTSB-230ENST00000534149 ASNSP08243 561 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms