RNA–Protein interactions for RNA: ENST00000533953.5

CMTM1-219, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 934 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-219ENST00000533953 IRF6O14896 467 aa16.14■□□□□ 0.17
CMTM1-219ENST00000533953 HSPA8P11142 646 aaKnown RBP16.14■□□□□ 0.17
CMTM1-219ENST00000533953 RILPL2Q969X0 211 aa16.14■□□□□ 0.17
CMTM1-219ENST00000533953 STRBPQ96SI9 672 aaKnown RBP16.14■□□□□ 0.17
CMTM1-219ENST00000533953 PTPN18Q99952 460 aa16.14■□□□□ 0.17
CMTM1-219ENST00000533953 DHX36Q9H2U1 1008 aaKnown RBP16.14■□□□□ 0.17
CMTM1-219ENST00000533953 DCP1AQ9NPI6 582 aaPredicted RBP16.14■□□□□ 0.17
CMTM1-219ENST00000533953 MCM9Q9NXL9 1143 aa16.14■□□□□ 0.17
CMTM1-219ENST00000533953 SLC4A4Q9Y6R1 1079 aa16.14■□□□□ 0.17
CMTM1-219ENST00000533953 TRIM6-TRIM34B2RNG4 842 aa16.13■□□□□ 0.17
CMTM1-219ENST00000533953 TBC1D12O60347 775 aa16.13■□□□□ 0.17
CMTM1-219ENST00000533953 TBC1D8O95759 1140 aa16.13■□□□□ 0.17
CMTM1-219ENST00000533953 POLR3DP05423 398 aaPredicted RBP16.13■□□□□ 0.17
CMTM1-219ENST00000533953 TM4SF4P48230 202 aa16.13■□□□□ 0.17
CMTM1-219ENST00000533953 TMED8Q6PL24 325 aaPredicted RBP16.13■□□□□ 0.17
CMTM1-219ENST00000533953 CCDC129Q6ZRS4 1044 aa16.13■□□□□ 0.17
CMTM1-219ENST00000533953 ERO1BQ86YB8 467 aa16.13■□□□□ 0.17
CMTM1-219ENST00000533953 FOXP4Q8IVH2 680 aaPredicted RBP16.13■□□□□ 0.17
CMTM1-219ENST00000533953 CRACR2BQ8N4Y2 399 aaPredicted RBP16.13■□□□□ 0.17
CMTM1-219ENST00000533953 APPBP2Q92624 585 aa16.13■□□□□ 0.17
CMTM1-219ENST00000533953 MS4A4AQ96JQ5 239 aa16.13■□□□□ 0.17
CMTM1-219ENST00000533953 R3HDMLQ9H3Y0 253 aa16.13■□□□□ 0.17
CMTM1-219ENST00000533953 PCNTO95613 3336 aa16.13■□□□□ 0.17
CMTM1-219ENST00000533953 AK9Q5TCS8 1911 aa16.13■□□□□ 0.17
CMTM1-219ENST00000533953 IGF2BP3O00425 579 aaKnown RBP eCLIP16.12■□□□□ 0.17
CMTM1-219ENST00000533953 GDF11O95390 407 aa16.12■□□□□ 0.17
CMTM1-219ENST00000533953 ZBTB48P10074 688 aaPredicted RBP16.12■□□□□ 0.17
CMTM1-219ENST00000533953 PTPRAP18433 802 aa16.12■□□□□ 0.17
CMTM1-219ENST00000533953 NOL9Q5SY16 702 aaKnown RBP16.12■□□□□ 0.17
CMTM1-219ENST00000533953 CERS3Q8IU89 383 aa16.12■□□□□ 0.17
CMTM1-219ENST00000533953 SCYL3Q8IZE3 742 aa16.12■□□□□ 0.17
CMTM1-219ENST00000533953 BRI3BPQ8WY22 251 aa16.12■□□□□ 0.17
CMTM1-219ENST00000533953 EVI5LQ96CN4 794 aa16.12■□□□□ 0.17
CMTM1-219ENST00000533953 DYNLL2Q96FJ2 89 aa16.12■□□□□ 0.17
CMTM1-219ENST00000533953 ZHX2Q9Y6X8 837 aa16.12■□□□□ 0.17
CMTM1-219ENST00000533953 MANSC4A6NHS7 340 aaPredicted RBP16.11■□□□□ 0.17
CMTM1-219ENST00000533953 USP17L12C9JPN9 530 aa16.11■□□□□ 0.17
CMTM1-219ENST00000533953 USP17L21D6R901 530 aa16.11■□□□□ 0.17
CMTM1-219ENST00000533953 GPAA1O43292 621 aa16.11■□□□□ 0.17
CMTM1-219ENST00000533953 CTNND1O60716 968 aaKnown RBP16.11■□□□□ 0.17
CMTM1-219ENST00000533953 HLA-DOAP06340 250 aa16.11■□□□□ 0.17
CMTM1-219ENST00000533953 ZFYP08048 801 aaPredicted RBP16.11■□□□□ 0.17
CMTM1-219ENST00000533953 CTCFP49711 727 aaPredicted RBP16.11■□□□□ 0.17
CMTM1-219ENST00000533953 ZMYM1Q5SVZ6 1142 aa16.11■□□□□ 0.17
CMTM1-219ENST00000533953 COL13A1Q5TAT6 717 aaPredicted RBP16.11■□□□□ 0.17
CMTM1-219ENST00000533953 METTL16Q86W50 562 aaKnown RBP16.11■□□□□ 0.17
CMTM1-219ENST00000533953 STK11IPQ8N1F8 1099 aa16.11■□□□□ 0.17
CMTM1-219ENST00000533953 SLC44A5Q8NCS7 719 aa16.11■□□□□ 0.17
CMTM1-219ENST00000533953 FAM227BQ96M60 508 aa16.11■□□□□ 0.17
CMTM1-219ENST00000533953 OSBPL3Q9H4L5 887 aa16.11■□□□□ 0.17
CMTM1-219ENST00000533953 PICK1Q9NRD5 415 aa16.11■□□□□ 0.17
CMTM1-219ENST00000533953 THSD7BQ9C0I4 1608 aa16.11■□□□□ 0.17
CMTM1-219ENST00000533953 COL2A1P02458 1487 aaPredicted RBP16.1■□□□□ 0.17
CMTM1-219ENST00000533953 OTOFQ9HC10 1997 aa16.1■□□□□ 0.17
CMTM1-219ENST00000533953 CCL15-CCL14A0A0B4J2E2 113 aa16.1■□□□□ 0.17
CMTM1-219ENST00000533953 GSG1L2A8MUP6 293 aa16.1■□□□□ 0.17
CMTM1-219ENST00000533953 CAP2P40123 477 aa16.1■□□□□ 0.17
CMTM1-219ENST00000533953 PPIL2Q13356 520 aa16.1■□□□□ 0.17
CMTM1-219ENST00000533953 CCL15Q16663 113 aa16.1■□□□□ 0.17
CMTM1-219ENST00000533953 TTC6Q86TZ1 520 aa16.1■□□□□ 0.17
CMTM1-219ENST00000533953 IFNL1Q8IU54 200 aa16.1■□□□□ 0.17
CMTM1-219ENST00000533953 TRIM34Q9BYJ4 488 aa16.1■□□□□ 0.17
CMTM1-219ENST00000533953 HERC5Q9UII4 1024 aaKnown RBP16.1■□□□□ 0.17
CMTM1-219ENST00000533953 CENPBP07199 599 aaPredicted RBP16.09■□□□□ 0.17
CMTM1-219ENST00000533953 PPATQ06203 517 aa16.09■□□□□ 0.17
CMTM1-219ENST00000533953 SREBF2Q12772 1141 aa16.09■□□□□ 0.17
CMTM1-219ENST00000533953 CTR9Q6PD62 1173 aa16.09■□□□□ 0.17
CMTM1-219ENST00000533953 FAM43AQ8N2R8 423 aa16.09■□□□□ 0.17
CMTM1-219ENST00000533953 EPB41L4AQ9HCS5 686 aaPredicted RBP16.09■□□□□ 0.17
CMTM1-219ENST00000533953 ATP8A2Q9NTI2 1148 aa16.09■□□□□ 0.17
CMTM1-219ENST00000533953 SERPINB13Q9UIV8 391 aa16.09■□□□□ 0.17
CMTM1-219ENST00000533953 A0A0D9SFI3 127 aa16.08■□□□□ 0.16
CMTM1-219ENST00000533953 TESPA1A2RU30 521 aaPredicted RBP16.08■□□□□ 0.16
CMTM1-219ENST00000533953 TRIM75PA6NK02 468 aa16.08■□□□□ 0.16
CMTM1-219ENST00000533953 APPP05067 770 aa16.08■□□□□ 0.16
CMTM1-219ENST00000533953 GSPT1P15170 499 aaKnown RBP16.08■□□□□ 0.16
CMTM1-219ENST00000533953 SHMT1P34896 483 aa16.08■□□□□ 0.16
CMTM1-219ENST00000533953 GTF2A2P52657 109 aa16.08■□□□□ 0.16
CMTM1-219ENST00000533953 NMIQ13287 307 aaPredicted RBP16.08■□□□□ 0.16
CMTM1-219ENST00000533953 SNAPC2Q13487 334 aa16.08■□□□□ 0.16
CMTM1-219ENST00000533953 DGKZQ13574 1117 aa16.08■□□□□ 0.16
CMTM1-219ENST00000533953 AFG3L2Q9Y4W6 797 aa16.08■□□□□ 0.16
CMTM1-219ENST00000533953 BTBD19C9JJ37 291 aa16.07■□□□□ 0.16
CMTM1-219ENST00000533953 GH2P01242 217 aa16.07■□□□□ 0.16
CMTM1-219ENST00000533953 NEFLP07196 543 aa16.07■□□□□ 0.16
CMTM1-219ENST00000533953 INHBEP58166 350 aa16.07■□□□□ 0.16
CMTM1-219ENST00000533953 GABPAQ06546 454 aa16.07■□□□□ 0.16
CMTM1-219ENST00000533953 SPP2Q13103 211 aa16.07■□□□□ 0.16
CMTM1-219ENST00000533953 MOGSQ13724 837 aa16.07■□□□□ 0.16
CMTM1-219ENST00000533953 LRRFIP1Q32MZ4 808 aaKnown RBP16.07■□□□□ 0.16
CMTM1-219ENST00000533953 C12orf60Q5U649 245 aa16.07■□□□□ 0.16
CMTM1-219ENST00000533953 VPS53Q5VIR6 699 aa16.07■□□□□ 0.16
CMTM1-219ENST00000533953 TATDN1Q6P1N9 297 aa16.07■□□□□ 0.16
CMTM1-219ENST00000533953 REM2Q8IYK8 340 aaPredicted RBP16.07■□□□□ 0.16
CMTM1-219ENST00000533953 EHD4Q9H223 541 aa16.07■□□□□ 0.16
CMTM1-219ENST00000533953 KCNH4Q9UQ05 1017 aa16.07■□□□□ 0.16
CMTM1-219ENST00000533953 CDK5RAP2Q96SN8 1893 aa16.06■□□□□ 0.16
CMTM1-219ENST00000533953 SIPA1L1O43166 1804 aa16.06■□□□□ 0.16
CMTM1-219ENST00000533953 MINDY4BA8MYZ0 360 aa16.06■□□□□ 0.16
CMTM1-219ENST00000533953 PATL2C9JE40 543 aaKnown RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms