RNA–Protein interactions for RNA: ENST00000533915.5

CMTM1-218, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 899 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-218ENST00000533915 APLP1P51693 650 aa16.77■□□□□ 0.28
CMTM1-218ENST00000533915 VPS53Q5VIR6 699 aa16.77■□□□□ 0.28
CMTM1-218ENST00000533915 EPB41L4AQ9HCS5 686 aaPredicted RBP16.77■□□□□ 0.28
CMTM1-218ENST00000533915 ANGEL1Q9UNK9 670 aaKnown RBP16.77■□□□□ 0.28
CMTM1-218ENST00000533915 FGAP02671 866 aa16.76■□□□□ 0.27
CMTM1-218ENST00000533915 MAP3K10Q02779 954 aa16.76■□□□□ 0.27
CMTM1-218ENST00000533915 PDE4BQ07343 736 aa16.76■□□□□ 0.27
CMTM1-218ENST00000533915 IMMTQ16891 758 aaKnown RBP16.76■□□□□ 0.27
CMTM1-218ENST00000533915 MIGA2Q7L4E1 593 aa16.76■□□□□ 0.27
CMTM1-218ENST00000533915 METTL16Q86W50 562 aaKnown RBP16.76■□□□□ 0.27
CMTM1-218ENST00000533915 PAPPA2Q9BXP8 1791 aa16.76■□□□□ 0.27
CMTM1-218ENST00000533915 ZNF213O14771 459 aa16.75■□□□□ 0.27
CMTM1-218ENST00000533915 PLCD1P51178 756 aa16.75■□□□□ 0.27
CMTM1-218ENST00000533915 PPARAQ07869 468 aa16.75■□□□□ 0.27
CMTM1-218ENST00000533915 PRKG1Q13976 671 aa16.75■□□□□ 0.27
CMTM1-218ENST00000533915 SLC4A8Q2Y0W8 1093 aa16.75■□□□□ 0.27
CMTM1-218ENST00000533915 DLK2Q6UY11 383 aa16.75■□□□□ 0.27
CMTM1-218ENST00000533915 CDAN1Q8IWY9 1227 aa16.75■□□□□ 0.27
CMTM1-218ENST00000533915 RNF41Q9H4P4 317 aaPredicted RBP16.75■□□□□ 0.27
CMTM1-218ENST00000533915 ABT1Q9ULW3 272 aaKnown RBP16.75■□□□□ 0.27
CMTM1-218ENST00000533915 CSADQ9Y600 493 aa16.75■□□□□ 0.27
CMTM1-218ENST00000533915 DDX60LQ5H9U9 1706 aaKnown RBP16.74■□□□□ 0.27
CMTM1-218ENST00000533915 EPB41L2O43491 1005 aaKnown RBP16.74■□□□□ 0.27
CMTM1-218ENST00000533915 USP2O75604 605 aaPredicted RBP16.74■□□□□ 0.27
CMTM1-218ENST00000533915 PCP11498 1178 aaKnown RBP16.74■□□□□ 0.27
CMTM1-218ENST00000533915 NT5C2P49902 561 aa16.74■□□□□ 0.27
CMTM1-218ENST00000533915 C1QTNF8P60827 252 aa16.74■□□□□ 0.27
CMTM1-218ENST00000533915 MAP3K9P80192 1104 aa16.74■□□□□ 0.27
CMTM1-218ENST00000533915 MAP3K11Q16584 847 aa16.74■□□□□ 0.27
CMTM1-218ENST00000533915 RNF20Q5VTR2 975 aa16.74■□□□□ 0.27
CMTM1-218ENST00000533915 CST9Q5W186 159 aa16.74■□□□□ 0.27
CMTM1-218ENST00000533915 ANKRD13AQ8IZ07 590 aa16.74■□□□□ 0.27
CMTM1-218ENST00000533915 MAP4K1Q92918 833 aa16.74■□□□□ 0.27
CMTM1-218ENST00000533915 KLRG1Q96E93 195 aa16.74■□□□□ 0.27
CMTM1-218ENST00000533915 WRNIP1Q96S55 665 aa16.74■□□□□ 0.27
CMTM1-218ENST00000533915 MKNK2Q9HBH9 465 aa16.74■□□□□ 0.27
CMTM1-218ENST00000533915 CREBZFQ9NS37 354 aa16.74■□□□□ 0.27
CMTM1-218ENST00000533915 GINM1Q9NU53 330 aa16.74■□□□□ 0.27
CMTM1-218ENST00000533915 ANAPC4Q9UJX5 808 aa16.74■□□□□ 0.27
CMTM1-218ENST00000533915 FOXP2O15409 715 aa16.73■□□□□ 0.27
CMTM1-218ENST00000533915 CTNND1O60716 968 aaKnown RBP16.73■□□□□ 0.27
CMTM1-218ENST00000533915 CYP2D6P10635 497 aa16.73■□□□□ 0.27
CMTM1-218ENST00000533915 HUNKP57058 714 aa16.73■□□□□ 0.27
CMTM1-218ENST00000533915 FMR1Q06787 632 aaKnown RBP eCLIP16.73■□□□□ 0.27
CMTM1-218ENST00000533915 C16orf86Q6ZW13 317 aa16.73■□□□□ 0.27
CMTM1-218ENST00000533915 IL25Q9H293 177 aa16.73■□□□□ 0.27
CMTM1-218ENST00000533915 SSC5DA1L4H1 1573 aa16.72■□□□□ 0.27
CMTM1-218ENST00000533915 LAMB1P07942 1786 aa16.72■□□□□ 0.27
CMTM1-218ENST00000533915 CYP2D7A0A087X1C5 515 aa16.72■□□□□ 0.27
CMTM1-218ENST00000533915 GABPAQ06546 454 aa16.72■□□□□ 0.27
CMTM1-218ENST00000533915 CERKLQ49MI3 558 aaPredicted RBP16.72■□□□□ 0.27
CMTM1-218ENST00000533915 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.72■□□□□ 0.27
CMTM1-218ENST00000533915 HHIPL1Q96JK4 782 aa16.72■□□□□ 0.27
CMTM1-218ENST00000533915 CCDC17Q96LX7 622 aa16.72■□□□□ 0.27
CMTM1-218ENST00000533915 LSG1Q9H089 658 aaKnown RBP16.72■□□□□ 0.27
CMTM1-218ENST00000533915 CABP5Q9NP86 173 aa16.72■□□□□ 0.27
CMTM1-218ENST00000533915 PICK1Q9NRD5 415 aa16.72■□□□□ 0.27
CMTM1-218ENST00000533915 ZNF112Q9UJU3 913 aa16.72■□□□□ 0.27
CMTM1-218ENST00000533915 TLL2Q9Y6L7 1015 aa16.72■□□□□ 0.27
CMTM1-218ENST00000533915 ROBO3Q96MS0 1386 aa16.72■□□□□ 0.27
CMTM1-218ENST00000533915 MYH8P13535 1937 aa16.71■□□□□ 0.27
CMTM1-218ENST00000533915 UBE2Q2LH0YL09 131 aa16.71■□□□□ 0.27
CMTM1-218ENST00000533915 MCCP23508 829 aa16.71■□□□□ 0.27
CMTM1-218ENST00000533915 CDK8P49336 464 aa16.71■□□□□ 0.27
CMTM1-218ENST00000533915 PTH1RQ03431 593 aa16.71■□□□□ 0.27
CMTM1-218ENST00000533915 LDLRAD1Q5T700 205 aa16.71■□□□□ 0.27
CMTM1-218ENST00000533915 TATDN1Q6P1N9 297 aa16.71■□□□□ 0.27
CMTM1-218ENST00000533915 MFSD6Q6ZSS7 791 aa16.71■□□□□ 0.27
CMTM1-218ENST00000533915 SAPCD2Q86UD0 394 aa16.71■□□□□ 0.27
CMTM1-218ENST00000533915 ZNF444Q8N0Y2 327 aaPredicted RBP16.71■□□□□ 0.27
CMTM1-218ENST00000533915 SLC10A4Q96EP9 437 aa16.71■□□□□ 0.27
CMTM1-218ENST00000533915 RBM8AQ9Y5S9 174 aaKnown RBP16.71■□□□□ 0.27
CMTM1-218ENST00000533915 FAM196BA6NMK8 535 aa16.7■□□□□ 0.26
CMTM1-218ENST00000533915 PHF20L1A8MW92 1017 aa16.7■□□□□ 0.26
CMTM1-218ENST00000533915 ASNSP08243 561 aa16.7■□□□□ 0.26
CMTM1-218ENST00000533915 ZKSCAN1P17029 563 aaPredicted RBP16.7■□□□□ 0.26
CMTM1-218ENST00000533915 TRDNQ13061 729 aa16.7■□□□□ 0.26
CMTM1-218ENST00000533915 NOL9Q5SY16 702 aaKnown RBP16.7■□□□□ 0.26
CMTM1-218ENST00000533915 DYNLL2Q96FJ2 89 aa16.7■□□□□ 0.26
CMTM1-218ENST00000533915 CNNM2Q9H8M5 875 aa16.7■□□□□ 0.26
CMTM1-218ENST00000533915 HSPA6P17066 643 aa16.69■□□□□ 0.26
CMTM1-218ENST00000533915 SHMT1P34896 483 aa16.69■□□□□ 0.26
CMTM1-218ENST00000533915 CAP2P40123 477 aa16.69■□□□□ 0.26
CMTM1-218ENST00000533915 HAND2P61296 217 aa16.69■□□□□ 0.26
CMTM1-218ENST00000533915 CTDSPL2Q05D32 466 aa16.69■□□□□ 0.26
CMTM1-218ENST00000533915 ABCB5Q2M3G0 1257 aa16.69■□□□□ 0.26
CMTM1-218ENST00000533915 PPP4R3BQ5MIZ7 849 aa16.69■□□□□ 0.26
CMTM1-218ENST00000533915 AKNAD1Q5T1N1 836 aa16.69■□□□□ 0.26
CMTM1-218ENST00000533915 MOB2Q70IA6 237 aa16.69■□□□□ 0.26
CMTM1-218ENST00000533915 SCYL3Q8IZE3 742 aa16.69■□□□□ 0.26
CMTM1-218ENST00000533915 CCDC102AQ96A19 550 aa16.69■□□□□ 0.26
CMTM1-218ENST00000533915 TBC1D2Q9BYX2 928 aa16.69■□□□□ 0.26
CMTM1-218ENST00000533915 TOMM22Q9NS69 142 aa16.69■□□□□ 0.26
CMTM1-218ENST00000533915 SIPA1L1O43166 1804 aa16.68■□□□□ 0.26
CMTM1-218ENST00000533915 MPHOSPH10O00566 681 aaKnown RBP16.68■□□□□ 0.26
CMTM1-218ENST00000533915 ORC4O43929 436 aa16.68■□□□□ 0.26
CMTM1-218ENST00000533915 INPP5BP32019 993 aa16.68■□□□□ 0.26
CMTM1-218ENST00000533915 ZNF157P51786 506 aaPredicted RBP16.68■□□□□ 0.26
CMTM1-218ENST00000533915 VGLL4Q14135 290 aa16.68■□□□□ 0.26
CMTM1-218ENST00000533915 RGMBQ6NW40 437 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms