RNA–Protein interactions for RNA: ENST00000533827.5

VPS51-213, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 3

Gene VPS51, Length 1,078 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-213ENST00000533827 PLCG2P16885 1265 aa21.32■■□□□ 1
VPS51-213ENST00000533827 PSMC4P43686 418 aa21.32■■□□□ 1
VPS51-213ENST00000533827 GADL1Q6ZQY3 521 aa21.32■■□□□ 1
VPS51-213ENST00000533827 CCDC84Q86UT8 332 aaPredicted RBP21.32■■□□□ 1
VPS51-213ENST00000533827 ERC1Q8IUD2 1116 aa21.32■■□□□ 1
VPS51-213ENST00000533827 TRIM47Q96LD4 638 aa21.32■■□□□ 1
VPS51-213ENST00000533827 SLC45A1Q9Y2W3 748 aa21.32■■□□□ 1
VPS51-213ENST00000533827 FOCADQ5VW36 1801 aa21.32■■□□□ 1
VPS51-213ENST00000533827 TRIM75PA6NK02 468 aa21.31■■□□□ 1
VPS51-213ENST00000533827 CAP2P40123 477 aa21.31■■□□□ 1
VPS51-213ENST00000533827 RRP1BQ14684 758 aaKnown RBP21.31■■□□□ 1
VPS51-213ENST00000533827 TGFBRAP1Q8WUH2 860 aa21.31■■□□□ 1
VPS51-213ENST00000533827 DHX36Q9H2U1 1008 aaKnown RBP21.31■■□□□ 1
VPS51-213ENST00000533827 PI4KBQ9UBF8 816 aa21.31■■□□□ 1
VPS51-213ENST00000533827 HERC5Q9UII4 1024 aaKnown RBP21.31■■□□□ 1
VPS51-213ENST00000533827 ATAD5Q96QE3 1844 aa21.31■■□□□ 1
VPS51-213ENST00000533827 MKI67P46013 3256 aaKnown RBP21.3■■□□□ 1
VPS51-213ENST00000533827 ECM2O94769 699 aaPredicted RBP21.3■■□□□ 1
VPS51-213ENST00000533827 TMEM106CQ9BVX2 250 aa21.3■■□□□ 1
VPS51-213ENST00000533827 SRRDQ9UH36 339 aa21.3■■□□□ 1
VPS51-213ENST00000533827 FLT1P17948 1338 aa21.29■■□□□ 1
VPS51-213ENST00000533827 PDE4DIPQ5VU43 2346 aa21.29■■□□□ 1
VPS51-213ENST00000533827 EN2P19622 333 aaPredicted RBP21.29■■□□□ 1
VPS51-213ENST00000533827 OSBPP22059 807 aa21.29■■□□□ 1
VPS51-213ENST00000533827 PRPF38BQ5VTL8 546 aaKnown RBP21.29■■□□□ 1
VPS51-213ENST00000533827 MAPKAPK5Q8IW41 473 aa21.29■■□□□ 1
VPS51-213ENST00000533827 SH3TC2Q8TF17 1288 aa21.29■■□□□ 1
VPS51-213ENST00000533827 TBC1D2Q9BYX2 928 aa21.29■■□□□ 1
VPS51-213ENST00000533827 FMNL1O95466 1100 aaPredicted RBP21.28■■□□□ 1
VPS51-213ENST00000533827 CYP7A1P22680 504 aa21.28■■□□□ 1
VPS51-213ENST00000533827 HOXD10P28358 340 aa21.28■■□□□ 1
VPS51-213ENST00000533827 HSP90AB4PQ58FF6 505 aa21.28■■□□□ 1
VPS51-213ENST00000533827 AACSQ86V21 672 aa21.28■■□□□ 1
VPS51-213ENST00000533827 METTL16Q86W50 562 aaKnown RBP21.28■■□□□ 1
VPS51-213ENST00000533827 RPAP2Q8IXW5 612 aaPredicted RBP21.28■■□□□ 1
VPS51-213ENST00000533827 RHPN1Q8TCX5 695 aa21.28■■□□□ 1
VPS51-213ENST00000533827 ZBTB40Q9NUA8 1239 aa21.28■■□□□ 1
VPS51-213ENST00000533827 DDX19BQ9UMR2 479 aa21.28■■□□□ 1
VPS51-213ENST00000533827 AGTPBP1Q9UPW5 1226 aa21.28■■□□□ 1
VPS51-213ENST00000533827 COG6Q9Y2V7 657 aa21.28■■□□□ 1
VPS51-213ENST00000533827 NDUFB9Q9Y6M9 179 aa21.28■■□□□ 1
VPS51-213ENST00000533827 MGAMO43451 1857 aa21.27■■□□□ 1
VPS51-213ENST00000533827 IDH1O75874 414 aaKnown RBP21.27■■□□□ 1
VPS51-213ENST00000533827 DYNLL1P63167 89 aaKnown RBP21.27■■□□□ 1
VPS51-213ENST00000533827 SPP2Q13103 211 aa21.27■■□□□ 1
VPS51-213ENST00000533827 PROCA1Q8NCQ7 364 aaPredicted RBP21.27■■□□□ 1
VPS51-213ENST00000533827 ZNF280CQ8ND82 737 aa21.27■■□□□ 1
VPS51-213ENST00000533827 ANTXR1Q9H6X2 564 aa21.27■■□□□ 1
VPS51-213ENST00000533827 DNAJC18Q9H819 358 aa21.27■■□□□ 1
VPS51-213ENST00000533827 IL1RAPL2Q9NP60 686 aa21.27■■□□□ 1
VPS51-213ENST00000533827 LOC285556D6RIA3 1793 aa21.27■■□□□ 1
VPS51-213ENST00000533827 USP17L5A8MUK1 530 aa21.26■□□□□ 0.99
VPS51-213ENST00000533827 TREML2Q5T2D2 321 aa21.26■□□□□ 0.99
VPS51-213ENST00000533827 FOXP4Q8IVH2 680 aaPredicted RBP21.26■□□□□ 0.99
VPS51-213ENST00000533827 SIRT2Q8IXJ6 389 aa21.26■□□□□ 0.99
VPS51-213ENST00000533827 PALD1Q9ULE6 856 aa21.26■□□□□ 0.99
VPS51-213ENST00000533827 MYPNQ86TC9 1320 aa21.26■□□□□ 0.99
VPS51-213ENST00000533827 FCGRTP55899 365 aa21.25■□□□□ 0.99
VPS51-213ENST00000533827 TMED8Q6PL24 325 aaPredicted RBP21.25■□□□□ 0.99
VPS51-213ENST00000533827 MAGEB6Q8N7X4 407 aa21.25■□□□□ 0.99
VPS51-213ENST00000533827 RCAN3Q9UKA8 241 aa21.25■□□□□ 0.99
VPS51-213ENST00000533827 JAG1P78504 1218 aa21.24■□□□□ 0.99
VPS51-213ENST00000533827 SLC4A8Q2Y0W8 1093 aa21.24■□□□□ 0.99
VPS51-213ENST00000533827 SH3D19Q5HYK7 790 aa21.24■□□□□ 0.99
VPS51-213ENST00000533827 CERS3Q8IU89 383 aa21.24■□□□□ 0.99
VPS51-213ENST00000533827 SMCR8Q8TEV9 937 aaPredicted RBP21.24■□□□□ 0.99
VPS51-213ENST00000533827 KIF1BPQ96EK5 621 aa21.24■□□□□ 0.99
VPS51-213ENST00000533827 AS3MTQ9HBK9 375 aa21.24■□□□□ 0.99
VPS51-213ENST00000533827 HMMRO75330 724 aa21.23■□□□□ 0.99
VPS51-213ENST00000533827 MYCP01106 439 aaPredicted RBP21.23■□□□□ 0.99
VPS51-213ENST00000533827 GRK4P32298 578 aa21.23■□□□□ 0.99
VPS51-213ENST00000533827 HMGCS2P54868 508 aa21.23■□□□□ 0.99
VPS51-213ENST00000533827 PRKCZQ05513 592 aa21.23■□□□□ 0.99
VPS51-213ENST00000533827 MAP3K12Q12852 859 aa21.23■□□□□ 0.99
VPS51-213ENST00000533827 MIGA1Q8NAN2 632 aa21.23■□□□□ 0.99
VPS51-213ENST00000533827 RAET1EQ8TD07 263 aa21.23■□□□□ 0.99
VPS51-213ENST00000533827 WDR18Q9BV38 432 aa21.23■□□□□ 0.99
VPS51-213ENST00000533827 SAP30BPQ9UHR5 308 aaKnown RBP21.23■□□□□ 0.99
VPS51-213ENST00000533827 PNMA3Q9UL41 463 aa21.23■□□□□ 0.99
VPS51-213ENST00000533827 KIAA0100Q14667 2235 aaKnown RBP21.23■□□□□ 0.99
VPS51-213ENST00000533827 SLC34A2O95436 690 aa21.22■□□□□ 0.99
VPS51-213ENST00000533827 ASNSP08243 561 aa21.22■□□□□ 0.99
VPS51-213ENST00000533827 CLASRPQ8N2M8 674 aaKnown RBP21.22■□□□□ 0.99
VPS51-213ENST00000533827 CRACR2BQ8N4Y2 399 aaPredicted RBP21.22■□□□□ 0.99
VPS51-213ENST00000533827 GABRQQ9UN88 632 aa21.22■□□□□ 0.99
VPS51-213ENST00000533827 HLA-DOAP06340 250 aa21.21■□□□□ 0.99
VPS51-213ENST00000533827 MTFR1Q15390 333 aa21.21■□□□□ 0.99
VPS51-213ENST00000533827 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.21■□□□□ 0.99
VPS51-213ENST00000533827 CHMP4BQ9H444 224 aaKnown RBP21.21■□□□□ 0.99
VPS51-213ENST00000533827 GINM1Q9NU53 330 aa21.21■□□□□ 0.99
VPS51-213ENST00000533827 MYH1P12882 1939 aa21.21■□□□□ 0.99
VPS51-213ENST00000533827 APBB1O00213 710 aa21.2■□□□□ 0.98
VPS51-213ENST00000533827 RAB11FIP3O75154 756 aa21.2■□□□□ 0.98
VPS51-213ENST00000533827 USP5P45974 858 aa21.2■□□□□ 0.98
VPS51-213ENST00000533827 BACE1P56817 501 aa21.2■□□□□ 0.98
VPS51-213ENST00000533827 PABPC4Q13310 644 aaKnown RBP eCLIP21.2■□□□□ 0.981e-6■■■■■ 28.7
VPS51-213ENST00000533827 TTF1Q15361 905 aaPredicted RBP21.2■□□□□ 0.98
VPS51-213ENST00000533827 SHROOM1Q2M3G4 852 aaPredicted RBP21.2■□□□□ 0.98
VPS51-213ENST00000533827 ANKRD13CQ8N6S4 541 aa21.2■□□□□ 0.98
VPS51-213ENST00000533827 RIOK1Q9BRS2 568 aaKnown RBP21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms