RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 SLURP2P0DP57 97 aa15.16■□□□□ 0.02
CAPRIN1-213ENST00000533562 TBC1D2Q9BYX2 928 aa15.16■□□□□ 0.02
CAPRIN1-213ENST00000533562 CHMP4BQ9H444 224 aaKnown RBP15.16■□□□□ 0.02
CAPRIN1-213ENST00000533562 EXOC6BQ9Y2D4 811 aa15.16■□□□□ 0.02
CAPRIN1-213ENST00000533562 CYP2C8P10632 490 aa15.15■□□□□ 0.02
CAPRIN1-213ENST00000533562 CAP2P40123 477 aa15.15■□□□□ 0.02
CAPRIN1-213ENST00000533562 SLC4A8Q2Y0W8 1093 aa15.15■□□□□ 0.02
CAPRIN1-213ENST00000533562 TMED8Q6PL24 325 aaPredicted RBP15.15■□□□□ 0.02
CAPRIN1-213ENST00000533562 CERS3Q8IU89 383 aa15.15■□□□□ 0.02
CAPRIN1-213ENST00000533562 FOXP4Q8IVH2 680 aaPredicted RBP15.15■□□□□ 0.02
CAPRIN1-213ENST00000533562 RPAP2Q8IXW5 612 aaPredicted RBP15.15■□□□□ 0.02
CAPRIN1-213ENST00000533562 TGFBRAP1Q8WUH2 860 aa15.15■□□□□ 0.02
CAPRIN1-213ENST00000533562 PIH1D3Q9NQM4 214 aaKnown RBP15.15■□□□□ 0.02
CAPRIN1-213ENST00000533562 TLR7Q9NYK1 1049 aaKnown RBP15.15■□□□□ 0.02
CAPRIN1-213ENST00000533562 DDX19BQ9UMR2 479 aa15.15■□□□□ 0.02
CAPRIN1-213ENST00000533562 ADGRA2Q96PE1 1338 aa15.15■□□□□ 0.02
CAPRIN1-213ENST00000533562 FAM196BA6NMK8 535 aa15.14■□□□□ 0.01
CAPRIN1-213ENST00000533562 HMMRO75330 724 aa15.14■□□□□ 0.01
CAPRIN1-213ENST00000533562 IDH1O75874 414 aaKnown RBP15.14■□□□□ 0.01
CAPRIN1-213ENST00000533562 ECM2O94769 699 aaPredicted RBP15.14■□□□□ 0.01
CAPRIN1-213ENST00000533562 BCRP11274 1271 aa15.14■□□□□ 0.01
CAPRIN1-213ENST00000533562 CYP7A1P22680 504 aa15.14■□□□□ 0.01
CAPRIN1-213ENST00000533562 FCGRTP55899 365 aa15.14■□□□□ 0.01
CAPRIN1-213ENST00000533562 SPP2Q13103 211 aa15.14■□□□□ 0.01
CAPRIN1-213ENST00000533562 PRPF38BQ5VTL8 546 aaKnown RBP15.14■□□□□ 0.01
CAPRIN1-213ENST00000533562 AACSQ86V21 672 aa15.14■□□□□ 0.01
CAPRIN1-213ENST00000533562 ZNF280CQ8ND82 737 aa15.14■□□□□ 0.01
CAPRIN1-213ENST00000533562 SMCR8Q8TEV9 937 aaPredicted RBP15.14■□□□□ 0.01
CAPRIN1-213ENST00000533562 TRIM47Q96LD4 638 aa15.14■□□□□ 0.01
CAPRIN1-213ENST00000533562 TRIM34Q9BYJ4 488 aa15.14■□□□□ 0.01
CAPRIN1-213ENST00000533562 SRRDQ9UH36 339 aa15.14■□□□□ 0.01
CAPRIN1-213ENST00000533562 USP17L5A8MUK1 530 aa15.13■□□□□ 0.01
CAPRIN1-213ENST00000533562 EN2P19622 333 aaPredicted RBP15.13■□□□□ 0.01
CAPRIN1-213ENST00000533562 OSBPP22059 807 aa15.13■□□□□ 0.01
CAPRIN1-213ENST00000533562 MAP3K12Q12852 859 aa15.13■□□□□ 0.01
CAPRIN1-213ENST00000533562 ADGRA1Q86SQ6 560 aa15.13■□□□□ 0.01
CAPRIN1-213ENST00000533562 MAPKAPK5Q8IW41 473 aa15.13■□□□□ 0.01
CAPRIN1-213ENST00000533562 CLASRPQ8N2M8 674 aaKnown RBP15.13■□□□□ 0.01
CAPRIN1-213ENST00000533562 CRACR2BQ8N4Y2 399 aaPredicted RBP15.13■□□□□ 0.01
CAPRIN1-213ENST00000533562 PROCA1Q8NCQ7 364 aaPredicted RBP15.13■□□□□ 0.01
CAPRIN1-213ENST00000533562 RAET1EQ8TD07 263 aa15.13■□□□□ 0.01
CAPRIN1-213ENST00000533562 SH3TC2Q8TF17 1288 aa15.13■□□□□ 0.01
CAPRIN1-213ENST00000533562 AS3MTQ9HBK9 375 aa15.13■□□□□ 0.01
CAPRIN1-213ENST00000533562 PNMA3Q9UL41 463 aa15.13■□□□□ 0.01
CAPRIN1-213ENST00000533562 AGTPBP1Q9UPW5 1226 aa15.13■□□□□ 0.01
CAPRIN1-213ENST00000533562 HLA-DOAP06340 250 aa15.12■□□□□ 0.01
CAPRIN1-213ENST00000533562 CTGFP29279 349 aa15.12■□□□□ 0.01
CAPRIN1-213ENST00000533562 PABPC4Q13310 644 aaKnown RBP eCLIP15.12■□□□□ 0.01
CAPRIN1-213ENST00000533562 CCDC84Q86UT8 332 aaPredicted RBP15.12■□□□□ 0.01
CAPRIN1-213ENST00000533562 RHPN1Q8TCX5 695 aa15.12■□□□□ 0.01
CAPRIN1-213ENST00000533562 GINM1Q9NU53 330 aa15.12■□□□□ 0.01
CAPRIN1-213ENST00000533562 ZBTB40Q9NUA8 1239 aa15.12■□□□□ 0.01
CAPRIN1-213ENST00000533562 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.12■□□□□ 0.01
CAPRIN1-213ENST00000533562 RCAN3Q9UKA8 241 aa15.12■□□□□ 0.01
CAPRIN1-213ENST00000533562 PALD1Q9ULE6 856 aa15.12■□□□□ 0.01
CAPRIN1-213ENST00000533562 COG6Q9Y2V7 657 aa15.12■□□□□ 0.01
CAPRIN1-213ENST00000533562 FLT1P17948 1338 aa15.12■□□□□ 0.01
CAPRIN1-213ENST00000533562 MYCP01106 439 aaPredicted RBP15.11■□□□□ 0.01
CAPRIN1-213ENST00000533562 ASNSP08243 561 aa15.11■□□□□ 0.01
CAPRIN1-213ENST00000533562 TTF1Q15361 905 aaPredicted RBP15.11■□□□□ 0.01
CAPRIN1-213ENST00000533562 METTL16Q86W50 562 aaKnown RBP15.11■□□□□ 0.01
CAPRIN1-213ENST00000533562 MAGEB6Q8N7X4 407 aa15.11■□□□□ 0.01
CAPRIN1-213ENST00000533562 KIF1BPQ96EK5 621 aa15.11■□□□□ 0.01
CAPRIN1-213ENST00000533562 IL1RAPL2Q9NP60 686 aa15.11■□□□□ 0.01
CAPRIN1-213ENST00000533562 MYPNQ86TC9 1320 aa15.11■□□□□ 0.01
CAPRIN1-213ENST00000533562 DOCK1Q14185 1865 aa15.1■□□□□ 0.01
CAPRIN1-213ENST00000533562 APBB1O00213 710 aa15.1■□□□□ 0.01
CAPRIN1-213ENST00000533562 RAB11FIP3O75154 756 aa15.1■□□□□ 0.01
CAPRIN1-213ENST00000533562 IFIT2P09913 472 aaKnown RBP15.1■□□□□ 0.01
CAPRIN1-213ENST00000533562 GRK4P32298 578 aa15.1■□□□□ 0.01
CAPRIN1-213ENST00000533562 USP5P45974 858 aa15.1■□□□□ 0.01
CAPRIN1-213ENST00000533562 HMGCS2P54868 508 aa15.1■□□□□ 0.01
CAPRIN1-213ENST00000533562 DYNLL1P63167 89 aaKnown RBP15.1■□□□□ 0.01
CAPRIN1-213ENST00000533562 RRP1BQ14684 758 aaKnown RBP15.1■□□□□ 0.01
CAPRIN1-213ENST00000533562 MIGA1Q8NAN2 632 aa15.1■□□□□ 0.01
CAPRIN1-213ENST00000533562 WDR18Q9BV38 432 aa15.1■□□□□ 0.01
CAPRIN1-213ENST00000533562 BIN2Q9UBW5 565 aaPredicted RBP15.1■□□□□ 0.01
CAPRIN1-213ENST00000533562 GCLCP48506 637 aaPredicted RBP15.09■□□□□ 0.01
CAPRIN1-213ENST00000533562 SH3D19Q5HYK7 790 aa15.09■□□□□ 0.01
CAPRIN1-213ENST00000533562 TREML2Q5T2D2 321 aa15.09■□□□□ 0.01
CAPRIN1-213ENST00000533562 ANTXR1Q9H6X2 564 aa15.09■□□□□ 0.01
CAPRIN1-213ENST00000533562 TMOD4Q9NZQ9 345 aa15.09■□□□□ 0.01
CAPRIN1-213ENST00000533562 SAP30BPQ9UHR5 308 aaKnown RBP15.09■□□□□ 0.01
CAPRIN1-213ENST00000533562 NDUFB9Q9Y6M9 179 aa15.09■□□□□ 0.01
CAPRIN1-213ENST00000533562 C19orf81C9J6K1 198 aa15.08■□□□□ 0
CAPRIN1-213ENST00000533562 TNPO2O14787 897 aaKnown RBP15.08■□□□□ 0
CAPRIN1-213ENST00000533562 BACE1P56817 501 aa15.08■□□□□ 0
CAPRIN1-213ENST00000533562 UBXN2AP68543 259 aa15.08■□□□□ 0
CAPRIN1-213ENST00000533562 PRKCZQ05513 592 aa15.08■□□□□ 0
CAPRIN1-213ENST00000533562 TTC6Q86TZ1 520 aa15.08■□□□□ 0
CAPRIN1-213ENST00000533562 POTEDQ86YR6 584 aa15.08■□□□□ 0
CAPRIN1-213ENST00000533562 SIRT2Q8IXJ6 389 aa15.08■□□□□ 0
CAPRIN1-213ENST00000533562 ANKRD13CQ8N6S4 541 aa15.08■□□□□ 0
CAPRIN1-213ENST00000533562 SLAIN1Q8ND83 568 aa15.08■□□□□ 0
CAPRIN1-213ENST00000533562 COA7Q96BR5 231 aa15.08■□□□□ 0
CAPRIN1-213ENST00000533562 PHIPQ8WWQ0 1821 aa15.08■□□□□ 0
CAPRIN1-213ENST00000533562 CEP290O15078 2479 aa15.07■□□□□ 0
CAPRIN1-213ENST00000533562 USP17L10C9JJH3 530 aa15.07■□□□□ 0
CAPRIN1-213ENST00000533562 PDE3AQ14432 1141 aa15.07■□□□□ 0
CAPRIN1-213ENST00000533562 FAM110CQ1W6H9 321 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms