RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 PASKQ96RG2 1323 aa20.79■□□□□ 0.92
NXF1-216ENST00000533499 SMIM22K7EJ46 135 aa20.79■□□□□ 0.92
NXF1-216ENST00000533499 C12orf60Q5U649 245 aa20.79■□□□□ 0.92
NXF1-216ENST00000533499 ARMC9Q7Z3E5 817 aa20.79■□□□□ 0.92
NXF1-216ENST00000533499 FOXP4Q8IVH2 680 aaPredicted RBP20.79■□□□□ 0.92
NXF1-216ENST00000533499 ZNF341Q9BYN7 854 aa20.79■□□□□ 0.92
NXF1-216ENST00000533499 CTNNA3Q9UI47 895 aa20.79■□□□□ 0.92
NXF1-216ENST00000533499 SERPINB13Q9UIV8 391 aa20.79■□□□□ 0.92
NXF1-216ENST00000533499 COL2A1P02458 1487 aaPredicted RBP20.79■□□□□ 0.92
NXF1-216ENST00000533499 SSC5DA1L4H1 1573 aa20.78■□□□□ 0.92
NXF1-216ENST00000533499 UBE2Q2LH0YL09 131 aa20.78■□□□□ 0.92
NXF1-216ENST00000533499 SLC3A2P08195 630 aaKnown RBP20.78■□□□□ 0.92
NXF1-216ENST00000533499 CTDSPL2Q05D32 466 aa20.78■□□□□ 0.92
NXF1-216ENST00000533499 PPARAQ07869 468 aa20.78■□□□□ 0.92
NXF1-216ENST00000533499 ALX1Q15699 326 aa20.78■□□□□ 0.92
NXF1-216ENST00000533499 TOMM22Q9NS69 142 aa20.78■□□□□ 0.92
NXF1-216ENST00000533499 ABT1Q9ULW3 272 aaKnown RBP20.78■□□□□ 0.92
NXF1-216ENST00000533499 U3KPZ7 1027 aaPredicted RBP20.78■□□□□ 0.92
NXF1-216ENST00000533499 REC8O95072 547 aa20.77■□□□□ 0.92
NXF1-216ENST00000533499 IREB2P48200 963 aaKnown RBP20.77■□□□□ 0.92
NXF1-216ENST00000533499 SBK1Q52WX2 424 aa20.77■□□□□ 0.92
NXF1-216ENST00000533499 CST9Q5W186 159 aa20.77■□□□□ 0.92
NXF1-216ENST00000533499 SLC44A5Q8NCS7 719 aa20.77■□□□□ 0.92
NXF1-216ENST00000533499 WRNIP1Q96S55 665 aa20.77■□□□□ 0.92
NXF1-216ENST00000533499 LSG1Q9H089 658 aaKnown RBP20.77■□□□□ 0.92
NXF1-216ENST00000533499 DDX60LQ5H9U9 1706 aaKnown RBP20.77■□□□□ 0.92
NXF1-216ENST00000533499 ZNF213O14771 459 aa20.76■□□□□ 0.91
NXF1-216ENST00000533499 USP2O75604 605 aaPredicted RBP20.76■□□□□ 0.91
NXF1-216ENST00000533499 IMMTQ16891 758 aaKnown RBP20.76■□□□□ 0.91
NXF1-216ENST00000533499 MKNK2Q9HBH9 465 aa20.76■□□□□ 0.91
NXF1-216ENST00000533499 HERC5Q9UII4 1024 aaKnown RBP20.76■□□□□ 0.91
NXF1-216ENST00000533499 RBM8AQ9Y5S9 174 aaKnown RBP20.76■□□□□ 0.91
NXF1-216ENST00000533499 LAMB1P07942 1786 aa20.75■□□□□ 0.91
NXF1-216ENST00000533499 TMEM88BA6NKF7 163 aa20.75■□□□□ 0.91
NXF1-216ENST00000533499 PAXIP1Q6ZW49 1069 aaPredicted RBP20.75■□□□□ 0.91
NXF1-216ENST00000533499 EHD4Q9H223 541 aa20.75■□□□□ 0.91
NXF1-216ENST00000533499 SIPA1L1O43166 1804 aa20.75■□□□□ 0.91
NXF1-216ENST00000533499 MPHOSPH10O00566 681 aaKnown RBP20.74■□□□□ 0.91
NXF1-216ENST00000533499 PRDM1O75626 825 aa20.74■□□□□ 0.91
NXF1-216ENST00000533499 CDK8P49336 464 aa20.74■□□□□ 0.91
NXF1-216ENST00000533499 HUNKP57058 714 aa20.74■□□□□ 0.91
NXF1-216ENST00000533499 RRP12Q5JTH9 1297 aaKnown RBP20.74■□□□□ 0.91
NXF1-216ENST00000533499 MAP4K1Q92918 833 aa20.74■□□□□ 0.91
NXF1-216ENST00000533499 TBC1D12O60347 775 aa20.73■□□□□ 0.91
NXF1-216ENST00000533499 GDF11O95390 407 aa20.73■□□□□ 0.91
NXF1-216ENST00000533499 INPP5BP32019 993 aa20.73■□□□□ 0.91
NXF1-216ENST00000533499 APLP1P51693 650 aa20.73■□□□□ 0.91
NXF1-216ENST00000533499 FKBP1BP68106 108 aa20.73■□□□□ 0.91
NXF1-216ENST00000533499 MAP3K9P80192 1104 aa20.73■□□□□ 0.91
NXF1-216ENST00000533499 PDE4BQ07343 736 aa20.73■□□□□ 0.91
NXF1-216ENST00000533499 ZKSCAN4Q969J2 545 aaPredicted RBP20.73■□□□□ 0.91
NXF1-216ENST00000533499 DNAJC18Q9H819 358 aa20.73■□□□□ 0.91
NXF1-216ENST00000533499 INCENPQ9NQS7 918 aa20.73■□□□□ 0.91
NXF1-216ENST00000533499 SWAP70Q9UH65 585 aa20.73■□□□□ 0.91
NXF1-216ENST00000533499 CSADQ9Y600 493 aa20.73■□□□□ 0.91
NXF1-216ENST00000533499 ZMYM6O95789 1325 aa20.73■□□□□ 0.91
NXF1-216ENST00000533499 MYH8P13535 1937 aa20.72■□□□□ 0.91
NXF1-216ENST00000533499 PAPPA2Q9BXP8 1791 aa20.72■□□□□ 0.91
NXF1-216ENST00000533499 C1QTNF8P60827 252 aa20.72■□□□□ 0.91
NXF1-216ENST00000533499 GRM1Q13255 1194 aa20.72■□□□□ 0.91
NXF1-216ENST00000533499 CERKLQ49MI3 558 aaPredicted RBP20.72■□□□□ 0.91
NXF1-216ENST00000533499 C16orf86Q6ZW13 317 aa20.72■□□□□ 0.91
NXF1-216ENST00000533499 KLRG1Q96E93 195 aa20.72■□□□□ 0.91
NXF1-216ENST00000533499 ZNF287Q9HBT7 754 aa20.72■□□□□ 0.91
NXF1-216ENST00000533499 SHMT1P34896 483 aa20.71■□□□□ 0.91
NXF1-216ENST00000533499 C8orf34Q49A92 452 aa20.71■□□□□ 0.91
NXF1-216ENST00000533499 MFSD6Q6ZSS7 791 aa20.71■□□□□ 0.91
NXF1-216ENST00000533499 TBC1D10CQ8IV04 446 aa20.71■□□□□ 0.91
NXF1-216ENST00000533499 ANKRD13AQ8IZ07 590 aa20.71■□□□□ 0.91
NXF1-216ENST00000533499 ZNF444Q8N0Y2 327 aaPredicted RBP20.71■□□□□ 0.91
NXF1-216ENST00000533499 CLMNQ96JQ2 1002 aa20.71■□□□□ 0.91
NXF1-216ENST00000533499 ELP3Q9H9T3 547 aa20.71■□□□□ 0.91
NXF1-216ENST00000533499 PICK1Q9NRD5 415 aa20.71■□□□□ 0.91
NXF1-216ENST00000533499 RANBP6O60518 1105 aaKnown RBP20.7■□□□□ 0.9
NXF1-216ENST00000533499 EIF5BO60841 1220 aaKnown RBP20.7■□□□□ 0.9
NXF1-216ENST00000533499 GABPAQ06546 454 aa20.7■□□□□ 0.9
NXF1-216ENST00000533499 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.7■□□□□ 0.95e-8■□□□□ 10.3
NXF1-216ENST00000533499 CABP5Q9NP86 173 aa20.7■□□□□ 0.9
NXF1-216ENST00000533499 PHF20L1A8MW92 1017 aa20.69■□□□□ 0.9
NXF1-216ENST00000533499 SLC27A2O14975 620 aa20.69■□□□□ 0.9
NXF1-216ENST00000533499 CYP21A2P08686 494 aa20.69■□□□□ 0.9
NXF1-216ENST00000533499 HTRA3P83110 453 aa20.69■□□□□ 0.9
NXF1-216ENST00000533499 MAP3K10Q02779 954 aa20.69■□□□□ 0.9
NXF1-216ENST00000533499 VGLL4Q14135 290 aa20.69■□□□□ 0.9
NXF1-216ENST00000533499 RRP1BQ14684 758 aaKnown RBP20.69■□□□□ 0.9
NXF1-216ENST00000533499 ABCB5Q2M3G0 1257 aa20.69■□□□□ 0.9
NXF1-216ENST00000533499 AKNAD1Q5T1N1 836 aa20.69■□□□□ 0.9
NXF1-216ENST00000533499 RNF20Q5VTR2 975 aa20.69■□□□□ 0.9
NXF1-216ENST00000533499 CREB3L3Q68CJ9 461 aa20.69■□□□□ 0.9
NXF1-216ENST00000533499 METTL16Q86W50 562 aaKnown RBP20.69■□□□□ 0.9
NXF1-216ENST00000533499 SLC10A4Q96EP9 437 aa20.69■□□□□ 0.9
NXF1-216ENST00000533499 RNF41Q9H4P4 317 aaPredicted RBP20.69■□□□□ 0.9
NXF1-216ENST00000533499 ANAPC4Q9UJX5 808 aa20.69■□□□□ 0.9
NXF1-216ENST00000533499 ROBO3Q96MS0 1386 aa20.69■□□□□ 0.9
NXF1-216ENST00000533499 CTNND1O60716 968 aaKnown RBP20.68■□□□□ 0.9
NXF1-216ENST00000533499 SEC24BO95487 1268 aa20.68■□□□□ 0.9
NXF1-216ENST00000533499 GH2P01242 217 aa20.68■□□□□ 0.9
NXF1-216ENST00000533499 MCCP23508 829 aa20.68■□□□□ 0.9
NXF1-216ENST00000533499 CAP2P40123 477 aa20.68■□□□□ 0.9
NXF1-216ENST00000533499 ZNF157P51786 506 aaPredicted RBP20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms