RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 SPINK5Q9NQ38 1064 aaPredicted RBP9.78□□□□□ -0.84
NXF1-215ENST00000533440 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.78□□□□□ -0.84
NXF1-215ENST00000533440 PRUNE2Q8WUY3 3088 aa9.78□□□□□ -0.84
NXF1-215ENST00000533440 GAKO14976 1311 aa9.78□□□□□ -0.84
NXF1-215ENST00000533440 PLXNB2O15031 1838 aa9.77□□□□□ -0.84
NXF1-215ENST00000533440 CCDC84Q86UT8 332 aaPredicted RBP9.77□□□□□ -0.85
NXF1-215ENST00000533440 TRIB2Q92519 343 aa9.77□□□□□ -0.85
NXF1-215ENST00000533440 DNAH12Q6ZR08 3092 aa9.77□□□□□ -0.85
NXF1-215ENST00000533440 LOC285556D6RIA3 1793 aa9.76□□□□□ -0.85
NXF1-215ENST00000533440 EYA2O00167 538 aa9.76□□□□□ -0.85
NXF1-215ENST00000533440 TBC1D12O60347 775 aa9.76□□□□□ -0.85
NXF1-215ENST00000533440 RFX5P48382 616 aaPredicted RBP9.76□□□□□ -0.85
NXF1-215ENST00000533440 PABPC4Q13310 644 aaKnown RBP eCLIP9.76□□□□□ -0.85
NXF1-215ENST00000533440 CCDC184Q52MB2 194 aa9.76□□□□□ -0.85
NXF1-215ENST00000533440 ZSCAN29Q8IWY8 852 aaPredicted RBP9.76□□□□□ -0.85
NXF1-215ENST00000533440 FAM163AQ96GL9 167 aaPredicted RBP9.76□□□□□ -0.85
NXF1-215ENST00000533440 DDX4Q9NQI0 724 aaKnown RBP9.76□□□□□ -0.85
NXF1-215ENST00000533440 MORF4L1Q9UBU8 362 aa9.76□□□□□ -0.85
NXF1-215ENST00000533440 SEMA3EO15041 775 aa9.75□□□□□ -0.85
NXF1-215ENST00000533440 XRCC5P13010 732 aaKnown RBP9.75□□□□□ -0.85
NXF1-215ENST00000533440 PRKAR2AP13861 404 aaKnown RBP9.75□□□□□ -0.85
NXF1-215ENST00000533440 MDM2Q00987 491 aaPredicted RBP9.75□□□□□ -0.85
NXF1-215ENST00000533440 SPP2Q13103 211 aa9.75□□□□□ -0.85
NXF1-215ENST00000533440 LRRC26Q2I0M4 334 aa9.75□□□□□ -0.85
NXF1-215ENST00000533440 SH3D19Q5HYK7 790 aa9.75□□□□□ -0.85
NXF1-215ENST00000533440 LHX8Q68G74 356 aa9.75□□□□□ -0.85
NXF1-215ENST00000533440 ATG9AQ7Z3C6 839 aa9.75□□□□□ -0.85
NXF1-215ENST00000533440 ZNF280CQ8ND82 737 aa9.75□□□□□ -0.85
NXF1-215ENST00000533440 TBC1D2Q9BYX2 928 aa9.75□□□□□ -0.85
NXF1-215ENST00000533440 OSBPL5Q9H0X9 879 aaPredicted RBP9.75□□□□□ -0.85
NXF1-215ENST00000533440 ASCC2Q9H1I8 757 aaPredicted RBP9.75□□□□□ -0.85
NXF1-215ENST00000533440 PRDM6Q9NQX0 595 aa9.75□□□□□ -0.85
NXF1-215ENST00000533440 GNL3LQ9NVN8 582 aaKnown RBP9.75□□□□□ -0.85
NXF1-215ENST00000533440 DENND2AQ9ULE3 1009 aa9.75□□□□□ -0.85
NXF1-215ENST00000533440 MYH2Q9UKX2 1941 aa9.75□□□□□ -0.85
NXF1-215ENST00000533440 CYP2B6P20813 491 aa9.74□□□□□ -0.85
NXF1-215ENST00000533440 HMGCS2P54868 508 aa9.74□□□□□ -0.85
NXF1-215ENST00000533440 CACNB2Q08289 660 aaPredicted RBP9.74□□□□□ -0.85
NXF1-215ENST00000533440 TRMT44Q8IYL2 757 aaKnown RBP9.74□□□□□ -0.85
NXF1-215ENST00000533440 ZGPATQ8N5A5 531 aaKnown RBP9.74□□□□□ -0.85
NXF1-215ENST00000533440 USP6NLQ92738 828 aa9.74□□□□□ -0.85
NXF1-215ENST00000533440 NUDT12Q9BQG2 462 aa9.74□□□□□ -0.85
NXF1-215ENST00000533440 USP44Q9H0E7 712 aa9.74□□□□□ -0.85
NXF1-215ENST00000533440 TTC28Q96AY4 2481 aa9.73□□□□□ -0.85
NXF1-215ENST00000533440 BTDP43251 543 aa9.73□□□□□ -0.85
NXF1-215ENST00000533440 PHKA1P46020 1223 aa9.73□□□□□ -0.85
NXF1-215ENST00000533440 RHBDL3P58872 404 aa9.73□□□□□ -0.85
NXF1-215ENST00000533440 PICALMQ13492 652 aa9.73□□□□□ -0.85
NXF1-215ENST00000533440 ATP2B3Q16720 1220 aa9.73□□□□□ -0.85
NXF1-215ENST00000533440 SOCS4Q8WXH5 440 aa9.73□□□□□ -0.85
NXF1-215ENST00000533440 FAM161BQ96MY7 647 aa9.73□□□□□ -0.85
NXF1-215ENST00000533440 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.73□□□□□ -0.85
NXF1-215ENST00000533440 FBXO3Q9UK99 471 aa9.73□□□□□ -0.85
NXF1-215ENST00000533440 GPR75-ASB3A0A0A6YYF3 556 aa9.72□□□□□ -0.85
NXF1-215ENST00000533440 FAM196BA6NMK8 535 aa9.72□□□□□ -0.85
NXF1-215ENST00000533440 USP17L5A8MUK1 530 aa9.72□□□□□ -0.85
NXF1-215ENST00000533440 CIAO1O76071 339 aa9.72□□□□□ -0.85
NXF1-215ENST00000533440 ZKSCAN1P17029 563 aaPredicted RBP9.72□□□□□ -0.85
NXF1-215ENST00000533440 CCND3P30281 292 aaPredicted RBP9.72□□□□□ -0.85
NXF1-215ENST00000533440 HOXA7P31268 230 aaPredicted RBP9.72□□□□□ -0.85
NXF1-215ENST00000533440 CAP2P40123 477 aa9.72□□□□□ -0.85
NXF1-215ENST00000533440 RRP1BQ14684 758 aaKnown RBP9.72□□□□□ -0.85
NXF1-215ENST00000533440 ZNF697Q5TEC3 545 aa9.72□□□□□ -0.85
NXF1-215ENST00000533440 DZIP1Q86YF9 867 aaKnown RBP9.72□□□□□ -0.85
NXF1-215ENST00000533440 SLF2Q8IX21 1173 aa9.72□□□□□ -0.85
NXF1-215ENST00000533440 CDX2Q99626 313 aaPredicted RBP9.72□□□□□ -0.85
NXF1-215ENST00000533440 TXNRD2Q9NNW7 524 aa9.72□□□□□ -0.85
NXF1-215ENST00000533440 CEP126Q9P2H0 1117 aa9.72□□□□□ -0.85
NXF1-215ENST00000533440 SALL2Q9Y467 1007 aaPredicted RBP9.72□□□□□ -0.85
NXF1-215ENST00000533440 MROH7-TTC4A0A0A0MT08 1334 aa9.72□□□□□ -0.85
NXF1-215ENST00000533440 PDS5AQ29RF7 1337 aaKnown RBP9.72□□□□□ -0.85
NXF1-215ENST00000533440 MAST2Q6P0Q8 1798 aa9.71□□□□□ -0.85
NXF1-215ENST00000533440 ATAD5Q96QE3 1844 aa9.71□□□□□ -0.85
NXF1-215ENST00000533440 PEX10O60683 326 aa9.71□□□□□ -0.86
NXF1-215ENST00000533440 MAP4K4O95819 1239 aaPredicted RBP9.71□□□□□ -0.86
NXF1-215ENST00000533440 MAPK4P31152 587 aa9.71□□□□□ -0.86
NXF1-215ENST00000533440 BACE1P56817 501 aa9.71□□□□□ -0.86
NXF1-215ENST00000533440 HERVK_113P62684 666 aa9.71□□□□□ -0.86
NXF1-215ENST00000533440 CCL14Q16627 93 aa9.71□□□□□ -0.86
NXF1-215ENST00000533440 MORN1Q5T089 497 aa9.71□□□□□ -0.86
NXF1-215ENST00000533440 CCDC102BQ68D86 513 aa9.71□□□□□ -0.86
NXF1-215ENST00000533440 MRPL50Q8N5N7 158 aaKnown RBP9.71□□□□□ -0.86
NXF1-215ENST00000533440 GPRC5AQ8NFJ5 357 aa9.71□□□□□ -0.86
NXF1-215ENST00000533440 MAFAQ8NHW3 353 aaPredicted RBP9.71□□□□□ -0.86
NXF1-215ENST00000533440 ZNF384Q8TF68 577 aa9.71□□□□□ -0.86
NXF1-215ENST00000533440 P2RX7Q99572 595 aaKnown RBP9.71□□□□□ -0.86
NXF1-215ENST00000533440 LBHD1Q9BQE6 289 aaPredicted RBP9.71□□□□□ -0.86
NXF1-215ENST00000533440 WDR18Q9BV38 432 aa9.71□□□□□ -0.86
NXF1-215ENST00000533440 SEMA6BQ9H3T3 888 aa9.71□□□□□ -0.86
NXF1-215ENST00000533440 AS3MTQ9HBK9 375 aa9.71□□□□□ -0.86
NXF1-215ENST00000533440 RBPJLQ9UBG7 517 aa9.71□□□□□ -0.86
NXF1-215ENST00000533440 ADORA1P30542 326 aa9.7□□□□□ -0.86
NXF1-215ENST00000533440 RGS2P41220 211 aa9.7□□□□□ -0.86
NXF1-215ENST00000533440 IRX3P78415 501 aaPredicted RBP9.7□□□□□ -0.86
NXF1-215ENST00000533440 RASGRF1Q13972 1273 aa9.7□□□□□ -0.86
NXF1-215ENST00000533440 PDE3AQ14432 1141 aa9.7□□□□□ -0.86
NXF1-215ENST00000533440 Q3C1V9 767 aa9.7□□□□□ -0.86
NXF1-215ENST00000533440 SPTY2D1Q68D10 685 aaPredicted RBP9.7□□□□□ -0.86
NXF1-215ENST00000533440 GPR142Q7Z601 462 aa9.7□□□□□ -0.86
NXF1-215ENST00000533440 PORCNQ9H237 461 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms