RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 NOGQ13253 232 aa14.4□□□□□ -0.1
SSBP3-214ENST00000533209 NMIQ13287 307 aaPredicted RBP14.4□□□□□ -0.1
SSBP3-214ENST00000533209 FOXP4Q8IVH2 680 aaPredicted RBP14.4□□□□□ -0.1
SSBP3-214ENST00000533209 FAM227BQ96M60 508 aa14.4□□□□□ -0.1
SSBP3-214ENST00000533209 DNAJC18Q9H819 358 aa14.4□□□□□ -0.1
SSBP3-214ENST00000533209 ELP3Q9H9T3 547 aa14.4□□□□□ -0.1
SSBP3-214ENST00000533209 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.4□□□□□ -0.1
SSBP3-214ENST00000533209 HELLSQ9NRZ9 838 aa14.4□□□□□ -0.1
SSBP3-214ENST00000533209 MCM9Q9NXL9 1143 aa14.4□□□□□ -0.1
SSBP3-214ENST00000533209 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.4□□□□□ -0.1
SSBP3-214ENST00000533209 CSADQ9Y600 493 aa14.4□□□□□ -0.1
SSBP3-214ENST00000533209 DDX60LQ5H9U9 1706 aaKnown RBP14.39□□□□□ -0.11
SSBP3-214ENST00000533209 GJA5P36382 358 aa14.39□□□□□ -0.11
SSBP3-214ENST00000533209 MAP2K2P36507 400 aa14.39□□□□□ -0.11
SSBP3-214ENST00000533209 PLCD1P51178 756 aa14.39□□□□□ -0.11
SSBP3-214ENST00000533209 EVX2Q03828 476 aa14.39□□□□□ -0.11
SSBP3-214ENST00000533209 RRP1BQ14684 758 aaKnown RBP14.39□□□□□ -0.11
SSBP3-214ENST00000533209 NOL9Q5SY16 702 aaKnown RBP14.39□□□□□ -0.11
SSBP3-214ENST00000533209 SPRYD7Q5W111 196 aa14.39□□□□□ -0.11
SSBP3-214ENST00000533209 CCDC129Q6ZRS4 1044 aa14.39□□□□□ -0.11
SSBP3-214ENST00000533209 TTC6Q86TZ1 520 aa14.39□□□□□ -0.11
SSBP3-214ENST00000533209 CNKSR2Q8WXI2 1034 aa14.39□□□□□ -0.11
SSBP3-214ENST00000533209 WNK4Q96J92 1243 aa14.39□□□□□ -0.11
SSBP3-214ENST00000533209 EHD4Q9H223 541 aa14.39□□□□□ -0.11
SSBP3-214ENST00000533209 SIPA1L1O43166 1804 aa14.38□□□□□ -0.11
SSBP3-214ENST00000533209 OTOFQ9HC10 1997 aa14.38□□□□□ -0.11
SSBP3-214ENST00000533209 FOXP2O15409 715 aa14.38□□□□□ -0.11
SSBP3-214ENST00000533209 POLR3DP05423 398 aaPredicted RBP14.38□□□□□ -0.11
SSBP3-214ENST00000533209 CYP2D6P10635 497 aa14.38□□□□□ -0.11
SSBP3-214ENST00000533209 GNAT2P19087 354 aa14.38□□□□□ -0.11
SSBP3-214ENST00000533209 KIF23Q02241 960 aaPredicted RBP14.38□□□□□ -0.11
SSBP3-214ENST00000533209 MKRN3Q13064 507 aaKnown RBP14.38□□□□□ -0.11
SSBP3-214ENST00000533209 GIMAP6Q6P9H5 292 aa14.38□□□□□ -0.11
SSBP3-214ENST00000533209 CTR9Q6PD62 1173 aa14.38□□□□□ -0.11
SSBP3-214ENST00000533209 CRACR2BQ8N4Y2 399 aaPredicted RBP14.38□□□□□ -0.11
SSBP3-214ENST00000533209 EPB41L4AQ9HCS5 686 aaPredicted RBP14.38□□□□□ -0.11
SSBP3-214ENST00000533209 SERPINB13Q9UIV8 391 aa14.38□□□□□ -0.11
SSBP3-214ENST00000533209 AK9Q5TCS8 1911 aa14.38□□□□□ -0.11
SSBP3-214ENST00000533209 THSD7BQ9C0I4 1608 aa14.37□□□□□ -0.11
SSBP3-214ENST00000533209 CYP2D7A0A087X1C5 515 aa14.37□□□□□ -0.11
SSBP3-214ENST00000533209 SPDYE5A6NIY4 337 aa14.37□□□□□ -0.11
SSBP3-214ENST00000533209 PATL2C9JE40 543 aaKnown RBP14.37□□□□□ -0.11
SSBP3-214ENST00000533209 USP17L12C9JPN9 530 aa14.37□□□□□ -0.11
SSBP3-214ENST00000533209 USP17L21D6R901 530 aa14.37□□□□□ -0.11
SSBP3-214ENST00000533209 CTNND1O60716 968 aaKnown RBP14.37□□□□□ -0.11
SSBP3-214ENST00000533209 ZBTB48P10074 688 aaPredicted RBP14.37□□□□□ -0.11
SSBP3-214ENST00000533209 GABPAQ06546 454 aa14.37□□□□□ -0.11
SSBP3-214ENST00000533209 MCMDC2Q4G0Z9 681 aa14.37□□□□□ -0.11
SSBP3-214ENST00000533209 C12orf60Q5U649 245 aa14.37□□□□□ -0.11
SSBP3-214ENST00000533209 ZNF589Q86UQ0 364 aaPredicted RBP14.37□□□□□ -0.11
SSBP3-214ENST00000533209 ERO1BQ86YB8 467 aa14.37□□□□□ -0.11
SSBP3-214ENST00000533209 SCYL3Q8IZE3 742 aa14.37□□□□□ -0.11
SSBP3-214ENST00000533209 OPTNQ96CV9 577 aa14.37□□□□□ -0.11
SSBP3-214ENST00000533209 DDRGK1Q96HY6 314 aa14.37□□□□□ -0.11
SSBP3-214ENST00000533209 DIAPH3Q9NSV4 1193 aa14.37□□□□□ -0.11
SSBP3-214ENST00000533209 PCNTO95613 3336 aa14.37□□□□□ -0.11
SSBP3-214ENST00000533209 NAV1Q8NEY1 1877 aa14.36□□□□□ -0.11
SSBP3-214ENST00000533209 SMIM22K7EJ46 135 aa14.36□□□□□ -0.11
SSBP3-214ENST00000533209 HIP1O00291 1037 aa14.36□□□□□ -0.11
SSBP3-214ENST00000533209 CAP2P40123 477 aa14.36□□□□□ -0.11
SSBP3-214ENST00000533209 SBK1Q52WX2 424 aa14.36□□□□□ -0.11
SSBP3-214ENST00000533209 TRIM34Q9BYJ4 488 aa14.36□□□□□ -0.11
SSBP3-214ENST00000533209 MYH1P12882 1939 aa14.35□□□□□ -0.11
SSBP3-214ENST00000533209 APPP05067 770 aa14.35□□□□□ -0.11
SSBP3-214ENST00000533209 PTPRAP18433 802 aa14.35□□□□□ -0.11
SSBP3-214ENST00000533209 SHMT1P34896 483 aa14.35□□□□□ -0.11
SSBP3-214ENST00000533209 JAG1P78504 1218 aa14.35□□□□□ -0.11
SSBP3-214ENST00000533209 VPS53Q5VIR6 699 aa14.35□□□□□ -0.11
SSBP3-214ENST00000533209 TATDN1Q6P1N9 297 aa14.35□□□□□ -0.11
SSBP3-214ENST00000533209 CWC27Q6UX04 472 aaKnown RBP14.35□□□□□ -0.11
SSBP3-214ENST00000533209 IFNL3Q8IZI9 196 aa14.35□□□□□ -0.11
SSBP3-214ENST00000533209 DYNLL2Q96FJ2 89 aa14.35□□□□□ -0.11
SSBP3-214ENST00000533209 OTUD5Q96G74 571 aa14.35□□□□□ -0.11
SSBP3-214ENST00000533209 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.35□□□□□ -0.11
SSBP3-214ENST00000533209 ARPP21Q9UBL0 812 aaPredicted RBP14.35□□□□□ -0.11
SSBP3-214ENST00000533209 CHMLP26374 656 aa14.34□□□□□ -0.11
SSBP3-214ENST00000533209 TDO2P48775 406 aa14.34□□□□□ -0.11
SSBP3-214ENST00000533209 PPATQ06203 517 aa14.34□□□□□ -0.11
SSBP3-214ENST00000533209 PPIL2Q13356 520 aa14.34□□□□□ -0.11
SSBP3-214ENST00000533209 SHROOM1Q2M3G4 852 aaPredicted RBP14.34□□□□□ -0.11
SSBP3-214ENST00000533209 BMP2KLQ5H9B9 411 aa14.34□□□□□ -0.11
SSBP3-214ENST00000533209 AMOTL1Q8IY63 956 aa14.34□□□□□ -0.11
SSBP3-214ENST00000533209 MS4A4AQ96JQ5 239 aa14.34□□□□□ -0.11
SSBP3-214ENST00000533209 NACAP1Q9BZK3 213 aa14.34□□□□□ -0.11
SSBP3-214ENST00000533209 IL25Q9H293 177 aa14.34□□□□□ -0.11
SSBP3-214ENST00000533209 PICK1Q9NRD5 415 aa14.34□□□□□ -0.11
SSBP3-214ENST00000533209 WBP1LQ9NX94 342 aa14.34□□□□□ -0.11
SSBP3-214ENST00000533209 CCDC171Q6TFL3 1326 aa14.34□□□□□ -0.11
SSBP3-214ENST00000533209 IRF6O14896 467 aa14.33□□□□□ -0.12
SSBP3-214ENST00000533209 GDF11O95390 407 aa14.33□□□□□ -0.12
SSBP3-214ENST00000533209 TM4SF4P48230 202 aa14.33□□□□□ -0.12
SSBP3-214ENST00000533209 MAP2K1Q02750 393 aaPredicted RBP14.33□□□□□ -0.12
SSBP3-214ENST00000533209 ALX1Q15699 326 aa14.33□□□□□ -0.12
SSBP3-214ENST00000533209 C16orf86Q6ZW13 317 aa14.33□□□□□ -0.12
SSBP3-214ENST00000533209 CCDC84Q86UT8 332 aaPredicted RBP14.33□□□□□ -0.12
SSBP3-214ENST00000533209 SLC44A5Q8NCS7 719 aa14.33□□□□□ -0.12
SSBP3-214ENST00000533209 TAOK2Q9UL54 1235 aa14.33□□□□□ -0.12
SSBP3-214ENST00000533209 KCNH4Q9UQ05 1017 aa14.33□□□□□ -0.12
SSBP3-214ENST00000533209 MANSC4A6NHS7 340 aaPredicted RBP14.32□□□□□ -0.12
SSBP3-214ENST00000533209 HSPD1P10809 573 aaKnown RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms