RNA–Protein interactions for RNA: ENST00000533188.1

CSRP1-217, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 3

Gene CSRP1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-217ENST00000533188 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.53■□□□□ 0.4
CSRP1-217ENST00000533188 SAP30BPQ9UHR5 308 aaKnown RBP17.53■□□□□ 0.4
CSRP1-217ENST00000533188 PHIPQ8WWQ0 1821 aa17.53■□□□□ 0.4
CSRP1-217ENST00000533188 UNCXA6NJT0 531 aa17.52■□□□□ 0.4
CSRP1-217ENST00000533188 FAM196BA6NMK8 535 aa17.52■□□□□ 0.4
CSRP1-217ENST00000533188 RNF113AO15541 343 aaKnown RBP17.52■□□□□ 0.4
CSRP1-217ENST00000533188 GJA5P36382 358 aa17.52■□□□□ 0.4
CSRP1-217ENST00000533188 IREB2P48200 963 aaKnown RBP17.52■□□□□ 0.4
CSRP1-217ENST00000533188 NOM1Q5C9Z4 860 aaKnown RBP17.52■□□□□ 0.4
CSRP1-217ENST00000533188 CERS3Q8IU89 383 aa17.52■□□□□ 0.4
CSRP1-217ENST00000533188 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.52■□□□□ 0.4
CSRP1-217ENST00000533188 SDR42E1Q8WUS8 393 aa17.52■□□□□ 0.4
CSRP1-217ENST00000533188 OSBP2Q969R2 916 aa17.52■□□□□ 0.4
CSRP1-217ENST00000533188 SLC10A4Q96EP9 437 aa17.52■□□□□ 0.4
CSRP1-217ENST00000533188 M0R2C6 588 aa17.51■□□□□ 0.39
CSRP1-217ENST00000533188 GPR25O00155 361 aa17.51■□□□□ 0.39
CSRP1-217ENST00000533188 USP5P45974 858 aa17.51■□□□□ 0.39
CSRP1-217ENST00000533188 SREBF2Q12772 1141 aa17.51■□□□□ 0.39
CSRP1-217ENST00000533188 VGLL4Q14135 290 aa17.51■□□□□ 0.39
CSRP1-217ENST00000533188 DCAF15Q66K64 600 aa17.51■□□□□ 0.39
CSRP1-217ENST00000533188 APPBP2Q92624 585 aa17.51■□□□□ 0.39
CSRP1-217ENST00000533188 EVI5LQ96CN4 794 aa17.51■□□□□ 0.39
CSRP1-217ENST00000533188 HOOK2Q96ED9 719 aa17.51■□□□□ 0.39
CSRP1-217ENST00000533188 CCDC136Q96JN2 1154 aa17.51■□□□□ 0.39
CSRP1-217ENST00000533188 WRNIP1Q96S55 665 aa17.51■□□□□ 0.39
CSRP1-217ENST00000533188 CRNKL1Q9BZJ0 848 aaKnown RBP17.51■□□□□ 0.39
CSRP1-217ENST00000533188 PALD1Q9ULE6 856 aa17.51■□□□□ 0.39
CSRP1-217ENST00000533188 TRIM6-TRIM34B2RNG4 842 aa17.5■□□□□ 0.39
CSRP1-217ENST00000533188 IGF2BP3O00425 579 aaKnown RBP eCLIP17.5■□□□□ 0.39
CSRP1-217ENST00000533188 PRKAB2O43741 272 aa17.5■□□□□ 0.39
CSRP1-217ENST00000533188 ZFYP08048 801 aaPredicted RBP17.5■□□□□ 0.39
CSRP1-217ENST00000533188 ZBTB48P10074 688 aaPredicted RBP17.5■□□□□ 0.39
CSRP1-217ENST00000533188 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.5■□□□□ 0.39
CSRP1-217ENST00000533188 ZNF341Q9BYN7 854 aa17.5■□□□□ 0.39
CSRP1-217ENST00000533188 PTPRFP10586 1907 aa17.49■□□□□ 0.39
CSRP1-217ENST00000533188 GSPT1P15170 499 aaKnown RBP17.49■□□□□ 0.39
CSRP1-217ENST00000533188 INPP5BP32019 993 aa17.49■□□□□ 0.39
CSRP1-217ENST00000533188 EVX2Q03828 476 aa17.49■□□□□ 0.39
CSRP1-217ENST00000533188 IFNL1Q8IU54 200 aa17.49■□□□□ 0.39
CSRP1-217ENST00000533188 ANKRD13AQ8IZ07 590 aa17.49■□□□□ 0.39
CSRP1-217ENST00000533188 ZKSCAN4Q969J2 545 aaPredicted RBP17.49■□□□□ 0.39
CSRP1-217ENST00000533188 RILPL2Q969X0 211 aa17.49■□□□□ 0.39
CSRP1-217ENST00000533188 SEC62Q99442 399 aaKnown RBP17.49■□□□□ 0.39
CSRP1-217ENST00000533188 ELP3Q9H9T3 547 aa17.49■□□□□ 0.39
CSRP1-217ENST00000533188 SNCAIPQ9Y6H5 919 aa17.49■□□□□ 0.39
CSRP1-217ENST00000533188 MANSC4A6NHS7 340 aaPredicted RBP17.48■□□□□ 0.39
CSRP1-217ENST00000533188 MLLT1Q03111 559 aaPredicted RBP17.48■□□□□ 0.39
CSRP1-217ENST00000533188 ZMYM1Q5SVZ6 1142 aa17.48■□□□□ 0.39
CSRP1-217ENST00000533188 TTC22Q5TAA0 569 aa17.48■□□□□ 0.39
CSRP1-217ENST00000533188 CNKSR2Q8WXI2 1034 aa17.48■□□□□ 0.39
CSRP1-217ENST00000533188 DNAJC18Q9H819 358 aa17.48■□□□□ 0.39
CSRP1-217ENST00000533188 PHF20L1A8MW92 1017 aa17.47■□□□□ 0.39
CSRP1-217ENST00000533188 GPAA1O43292 621 aa17.47■□□□□ 0.39
CSRP1-217ENST00000533188 INHBEP58166 350 aa17.47■□□□□ 0.39
CSRP1-217ENST00000533188 MAP3K9P80192 1104 aa17.47■□□□□ 0.39
CSRP1-217ENST00000533188 LRRFIP1Q32MZ4 808 aaKnown RBP17.47■□□□□ 0.39
CSRP1-217ENST00000533188 CCDC129Q6ZRS4 1044 aa17.47■□□□□ 0.39
CSRP1-217ENST00000533188 STRBPQ96SI9 672 aaKnown RBP17.47■□□□□ 0.39
CSRP1-217ENST00000533188 PTPN18Q99952 460 aa17.47■□□□□ 0.39
CSRP1-217ENST00000533188 DHX36Q9H2U1 1008 aaKnown RBP17.47■□□□□ 0.39
CSRP1-217ENST00000533188 DCP1AQ9NPI6 582 aaPredicted RBP17.47■□□□□ 0.39
CSRP1-217ENST00000533188 CSADQ9Y600 493 aa17.47■□□□□ 0.39
CSRP1-217ENST00000533188 A0A0D9SFI3 127 aa17.46■□□□□ 0.39
CSRP1-217ENST00000533188 TESPA1A2RU30 521 aaPredicted RBP17.46■□□□□ 0.39
CSRP1-217ENST00000533188 CYP2D6P10635 497 aa17.46■□□□□ 0.39
CSRP1-217ENST00000533188 MAP3K10Q02779 954 aa17.46■□□□□ 0.39
CSRP1-217ENST00000533188 MS4A4AQ96JQ5 239 aa17.46■□□□□ 0.39
CSRP1-217ENST00000533188 FAM227BQ96M60 508 aa17.46■□□□□ 0.39
CSRP1-217ENST00000533188 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.46■□□□□ 0.39
CSRP1-217ENST00000533188 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.46■□□□□ 0.39
CSRP1-217ENST00000533188 ZNF112Q9UJU3 913 aa17.46■□□□□ 0.39
CSRP1-217ENST00000533188 HPS5Q9UPZ3 1129 aa17.46■□□□□ 0.39
CSRP1-217ENST00000533188 SLC4A4Q9Y6R1 1079 aa17.46■□□□□ 0.39
CSRP1-217ENST00000533188 LAMA4Q16363 1823 aa17.45■□□□□ 0.38
CSRP1-217ENST00000533188 ALDH1A1P00352 501 aa17.45■□□□□ 0.38
CSRP1-217ENST00000533188 HLA-DOAP06340 250 aa17.45■□□□□ 0.38
CSRP1-217ENST00000533188 OPTNQ96CV9 577 aa17.45■□□□□ 0.38
CSRP1-217ENST00000533188 EPB41L4AQ9HCS5 686 aaPredicted RBP17.45■□□□□ 0.38
CSRP1-217ENST00000533188 MCM9Q9NXL9 1143 aa17.45■□□□□ 0.38
CSRP1-217ENST00000533188 PI4KBQ9UBF8 816 aa17.45■□□□□ 0.38
CSRP1-217ENST00000533188 KIAA0100Q14667 2235 aaKnown RBP17.44■□□□□ 0.38
CSRP1-217ENST00000533188 CYP2D7A0A087X1C5 515 aa17.44■□□□□ 0.38
CSRP1-217ENST00000533188 SMIM22K7EJ46 135 aa17.44■□□□□ 0.38
CSRP1-217ENST00000533188 TBC1D12O60347 775 aa17.44■□□□□ 0.38
CSRP1-217ENST00000533188 FKTNO75072 461 aa17.44■□□□□ 0.38
CSRP1-217ENST00000533188 PLCD1P51178 756 aa17.44■□□□□ 0.38
CSRP1-217ENST00000533188 NMIQ13287 307 aaPredicted RBP17.44■□□□□ 0.38
CSRP1-217ENST00000533188 RRP1BQ14684 758 aaKnown RBP17.44■□□□□ 0.38
CSRP1-217ENST00000533188 PKN2Q16513 984 aaKnown RBP17.44■□□□□ 0.38
CSRP1-217ENST00000533188 SHROOM1Q2M3G4 852 aaPredicted RBP17.44■□□□□ 0.38
CSRP1-217ENST00000533188 CRACR2BQ8N4Y2 399 aaPredicted RBP17.44■□□□□ 0.38
CSRP1-217ENST00000533188 OTUD5Q96G74 571 aa17.44■□□□□ 0.38
CSRP1-217ENST00000533188 HERC5Q9UII4 1024 aaKnown RBP17.44■□□□□ 0.38
CSRP1-217ENST00000533188 LOC285556D6RIA3 1793 aa17.43■□□□□ 0.38
CSRP1-217ENST00000533188 SPDYE5A6NIY4 337 aa17.43■□□□□ 0.38
CSRP1-217ENST00000533188 GSG1L2A8MUP6 293 aa17.43■□□□□ 0.38
CSRP1-217ENST00000533188 SDSP20132 328 aa17.43■□□□□ 0.38
CSRP1-217ENST00000533188 SOX10P56693 466 aa17.43■□□□□ 0.38
CSRP1-217ENST00000533188 CAP1Q01518 475 aa17.43■□□□□ 0.38
CSRP1-217ENST00000533188 NOL9Q5SY16 702 aaKnown RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms