RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 XRCC5P13010 732 aaKnown RBP14.02□□□□□ -0.17
TRAPPC4-213ENST00000533149 MAP3K10Q02779 954 aa14.02□□□□□ -0.17
TRAPPC4-213ENST00000533149 TREML2Q5T2D2 321 aa14.02□□□□□ -0.17
TRAPPC4-213ENST00000533149 ERICH6BQ5W0A0 696 aa14.02□□□□□ -0.17
TRAPPC4-213ENST00000533149 PRKAG2Q9UGJ0 569 aa14.02□□□□□ -0.17
TRAPPC4-213ENST00000533149 TNNQ9UQP3 1299 aa14.02□□□□□ -0.17
TRAPPC4-213ENST00000533149 ATRNL1Q5VV63 1379 aa14.02□□□□□ -0.17
TRAPPC4-213ENST00000533149 IFIT1P09914 478 aaKnown RBP14.01□□□□□ -0.17
TRAPPC4-213ENST00000533149 MS4A1P11836 297 aa14.01□□□□□ -0.17
TRAPPC4-213ENST00000533149 FOSL2P15408 326 aa14.01□□□□□ -0.17
TRAPPC4-213ENST00000533149 CYP2B6P20813 491 aa14.01□□□□□ -0.17
TRAPPC4-213ENST00000533149 DIXDC1Q155Q3 683 aa14.01□□□□□ -0.17
TRAPPC4-213ENST00000533149 TJAP1Q5JTD0 557 aa14.01□□□□□ -0.17
TRAPPC4-213ENST00000533149 ZSCAN29Q8IWY8 852 aaPredicted RBP14.01□□□□□ -0.17
TRAPPC4-213ENST00000533149 ZFPM1Q8IX07 1006 aa14.01□□□□□ -0.17
TRAPPC4-213ENST00000533149 EXOC6Q8TAG9 804 aa14.01□□□□□ -0.17
TRAPPC4-213ENST00000533149 SOCS4Q8WXH5 440 aa14.01□□□□□ -0.17
TRAPPC4-213ENST00000533149 CRBNQ96SW2 442 aa14.01□□□□□ -0.17
TRAPPC4-213ENST00000533149 NUDT12Q9BQG2 462 aa14.01□□□□□ -0.17
TRAPPC4-213ENST00000533149 F6X3S4 739 aa14□□□□□ -0.17
TRAPPC4-213ENST00000533149 PLA2G5P39877 138 aa14□□□□□ -0.17
TRAPPC4-213ENST00000533149 ATF7IPQ6VMQ6 1270 aa14□□□□□ -0.17
TRAPPC4-213ENST00000533149 PANK1Q8TE04 598 aa14□□□□□ -0.17
TRAPPC4-213ENST00000533149 MYLIPQ8WY64 445 aa14□□□□□ -0.17
TRAPPC4-213ENST00000533149 ARHGAP45Q92619 1136 aa14□□□□□ -0.17
TRAPPC4-213ENST00000533149 CLUAP1Q96AJ1 413 aa14□□□□□ -0.17
TRAPPC4-213ENST00000533149 IDI2Q9BXS1 227 aa14□□□□□ -0.17
TRAPPC4-213ENST00000533149 VCANP13611 3396 aa14□□□□□ -0.17
TRAPPC4-213ENST00000533149 ALDH1L1O75891 902 aa13.99□□□□□ -0.17
TRAPPC4-213ENST00000533149 ZKSCAN1P17029 563 aaPredicted RBP13.99□□□□□ -0.17
TRAPPC4-213ENST00000533149 RGS3P49796 1198 aa13.99□□□□□ -0.17
TRAPPC4-213ENST00000533149 SMAD3P84022 425 aaKnown RBP13.99□□□□□ -0.17
TRAPPC4-213ENST00000533149 PUM3Q15397 648 aaKnown RBP13.99□□□□□ -0.17
TRAPPC4-213ENST00000533149 LHX8Q68G74 356 aa13.99□□□□□ -0.17
TRAPPC4-213ENST00000533149 VGLL2Q8N8G2 317 aa13.99□□□□□ -0.17
TRAPPC4-213ENST00000533149 FAM122AQ96E09 287 aa13.99□□□□□ -0.17
TRAPPC4-213ENST00000533149 TBC1D2Q9BYX2 928 aa13.99□□□□□ -0.17
TRAPPC4-213ENST00000533149 MORF4L1Q9UBU8 362 aa13.99□□□□□ -0.17
TRAPPC4-213ENST00000533149 PTPRFP10586 1907 aa13.99□□□□□ -0.17
TRAPPC4-213ENST00000533149 CACNA1FO60840 1977 aa13.98□□□□□ -0.17
TRAPPC4-213ENST00000533149 LDHBP07195 334 aaKnown RBP13.98□□□□□ -0.17
TRAPPC4-213ENST00000533149 RLBP1P12271 317 aa13.98□□□□□ -0.17
TRAPPC4-213ENST00000533149 TRIM27P14373 513 aa13.98□□□□□ -0.17
TRAPPC4-213ENST00000533149 CACNB2Q08289 660 aaPredicted RBP13.98□□□□□ -0.17
TRAPPC4-213ENST00000533149 LRRC24Q50LG9 513 aa13.98□□□□□ -0.17
TRAPPC4-213ENST00000533149 API5Q9BZZ5 524 aaKnown RBP13.98□□□□□ -0.17
TRAPPC4-213ENST00000533149 SENP6Q9GZR1 1112 aaPredicted RBP13.98□□□□□ -0.17
TRAPPC4-213ENST00000533149 ASCC2Q9H1I8 757 aaPredicted RBP13.98□□□□□ -0.17
TRAPPC4-213ENST00000533149 DOCK2Q92608 1830 aa13.98□□□□□ -0.17
TRAPPC4-213ENST00000533149 SPP2Q13103 211 aa13.97□□□□□ -0.17
TRAPPC4-213ENST00000533149 SHHQ15465 462 aa13.97□□□□□ -0.17
TRAPPC4-213ENST00000533149 ZNF280CQ8ND82 737 aa13.97□□□□□ -0.17
TRAPPC4-213ENST00000533149 COG6Q9Y2V7 657 aa13.97□□□□□ -0.17
TRAPPC4-213ENST00000533149 DOCK1Q14185 1865 aa13.97□□□□□ -0.17
TRAPPC4-213ENST00000533149 PHIPQ8WWQ0 1821 aa13.96□□□□□ -0.17
TRAPPC4-213ENST00000533149 TMEM265A0A087WTH1 108 aa13.96□□□□□ -0.17
TRAPPC4-213ENST00000533149 TBC1D12O60347 775 aa13.96□□□□□ -0.17
TRAPPC4-213ENST00000533149 FGFR2P21802 821 aa13.96□□□□□ -0.17
TRAPPC4-213ENST00000533149 PRDX5P30044 214 aa13.96□□□□□ -0.17
TRAPPC4-213ENST00000533149 CCND3P30281 292 aaPredicted RBP13.96□□□□□ -0.17
TRAPPC4-213ENST00000533149 SH3BP5LQ7L8J4 393 aa13.96□□□□□ -0.17
TRAPPC4-213ENST00000533149 FTSJ3Q8IY81 847 aaKnown RBP13.96□□□□□ -0.17
TRAPPC4-213ENST00000533149 GPRC5AQ8NFJ5 357 aa13.96□□□□□ -0.17
TRAPPC4-213ENST00000533149 KAZALD1Q96I82 304 aa13.96□□□□□ -0.17
TRAPPC4-213ENST00000533149 SUCLG2Q96I99 432 aa13.96□□□□□ -0.17
TRAPPC4-213ENST00000533149 TTYH1Q9H313 450 aaPredicted RBP13.96□□□□□ -0.17
TRAPPC4-213ENST00000533149 PPP4R2Q9NY27 417 aa13.96□□□□□ -0.17
TRAPPC4-213ENST00000533149 PTPRCP08575 1304 aa13.95□□□□□ -0.18
TRAPPC4-213ENST00000533149 DDTLA6NHG4 134 aaPredicted RBP13.95□□□□□ -0.18
TRAPPC4-213ENST00000533149 SLC5A1P13866 664 aa13.95□□□□□ -0.18
TRAPPC4-213ENST00000533149 MAPK4P31152 587 aa13.95□□□□□ -0.18
TRAPPC4-213ENST00000533149 RGS2P41220 211 aa13.95□□□□□ -0.18
TRAPPC4-213ENST00000533149 HMGCS2P54868 508 aa13.95□□□□□ -0.18
TRAPPC4-213ENST00000533149 CCDC84Q86UT8 332 aaPredicted RBP13.95□□□□□ -0.18
TRAPPC4-213ENST00000533149 CCAR1Q8IX12 1150 aaKnown RBP13.95□□□□□ -0.18
TRAPPC4-213ENST00000533149 LPIN2Q92539 896 aa13.95□□□□□ -0.18
TRAPPC4-213ENST00000533149 SRCIN1Q9C0H9 1055 aa13.95□□□□□ -0.18
TRAPPC4-213ENST00000533149 OSBPL5Q9H0X9 879 aaPredicted RBP13.95□□□□□ -0.18
TRAPPC4-213ENST00000533149 GNL3LQ9NVN8 582 aaKnown RBP13.95□□□□□ -0.18
TRAPPC4-213ENST00000533149 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.95□□□□□ -0.18
TRAPPC4-213ENST00000533149 SALL1Q9NSC2 1324 aa13.94□□□□□ -0.18
TRAPPC4-213ENST00000533149 MSCO60682 206 aa13.94□□□□□ -0.18
TRAPPC4-213ENST00000533149 IRX3P78415 501 aaPredicted RBP13.94□□□□□ -0.18
TRAPPC4-213ENST00000533149 RABL6Q3YEC7 729 aaPredicted RBP13.94□□□□□ -0.18
TRAPPC4-213ENST00000533149 SH3D19Q5HYK7 790 aa13.94□□□□□ -0.18
TRAPPC4-213ENST00000533149 TMEM57Q8N5G2 664 aa13.94□□□□□ -0.18
TRAPPC4-213ENST00000533149 BICC1Q9H694 974 aaKnown RBP13.94□□□□□ -0.18
TRAPPC4-213ENST00000533149 AS3MTQ9HBK9 375 aa13.94□□□□□ -0.18
TRAPPC4-213ENST00000533149 RAPGEFL1Q9UHV5 662 aa13.94□□□□□ -0.18
TRAPPC4-213ENST00000533149 PLXNB2O15031 1838 aa13.94□□□□□ -0.18
TRAPPC4-213ENST00000533149 SPTBN5Q9NRC6 3674 aaKnown RBP13.94□□□□□ -0.18
TRAPPC4-213ENST00000533149 LOC285556D6RIA3 1793 aa13.93□□□□□ -0.18
TRAPPC4-213ENST00000533149 DNM1LO00429 736 aa13.93□□□□□ -0.18
TRAPPC4-213ENST00000533149 NBPF7P0C2Y1 421 aaPredicted RBP13.93□□□□□ -0.18
TRAPPC4-213ENST00000533149 ATN1P54259 1190 aaPredicted RBP13.93□□□□□ -0.18
TRAPPC4-213ENST00000533149 RTP1P59025 263 aa13.93□□□□□ -0.18
TRAPPC4-213ENST00000533149 C9orf50Q5SZB4 431 aa13.93□□□□□ -0.18
TRAPPC4-213ENST00000533149 SLC4A10Q6U841 1118 aa13.93□□□□□ -0.18
TRAPPC4-213ENST00000533149 SLF2Q8IX21 1173 aa13.93□□□□□ -0.18
TRAPPC4-213ENST00000533149 ZGPATQ8N5A5 531 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms