RNA–Protein interactions for RNA: ENST00000533089.5

TGFBR3-210, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 6,455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-210ENST00000533089 TUBBP07437 444 aa7.79□□□□□ -1.16
TGFBR3-210ENST00000533089 MECOMQ03112 1051 aa7.79□□□□□ -1.16
TGFBR3-210ENST00000533089 OLFML1Q6UWY5 402 aa7.79□□□□□ -1.16
TGFBR3-210ENST00000533089 RNF217Q8TC41 542 aa7.79□□□□□ -1.16
TGFBR3-210ENST00000533089 ALS2CR12Q96Q35 445 aa7.79□□□□□ -1.16
TGFBR3-210ENST00000533089 KIF9Q9HAQ2 790 aa7.79□□□□□ -1.16
TGFBR3-210ENST00000533089 LARSQ9P2J5 1176 aaKnown RBP7.79□□□□□ -1.16
TGFBR3-210ENST00000533089 TRIM35Q9UPQ4 493 aa7.79□□□□□ -1.16
TGFBR3-210ENST00000533089 GOLGA6BA6NDN3 693 aa7.78□□□□□ -1.16
TGFBR3-210ENST00000533089 SEC31AO94979 1220 aaKnown RBP7.78□□□□□ -1.16
TGFBR3-210ENST00000533089 HAND2P61296 217 aa7.78□□□□□ -1.16
TGFBR3-210ENST00000533089 ACTN3Q08043 901 aaPredicted RBP7.78□□□□□ -1.16
TGFBR3-210ENST00000533089 TRIM11Q96F44 468 aa7.78□□□□□ -1.16
TGFBR3-210ENST00000533089 DCAF5Q96JK2 942 aa7.78□□□□□ -1.16
TGFBR3-210ENST00000533089 CAPS2Q9BXY5 557 aa7.78□□□□□ -1.16
TGFBR3-210ENST00000533089 DBF4Q9UBU7 674 aaPredicted RBP7.78□□□□□ -1.16
TGFBR3-210ENST00000533089 SCOCQ9UIL1 159 aa7.78□□□□□ -1.16
TGFBR3-210ENST00000533089 ROBO2Q9HCK4 1378 aa7.78□□□□□ -1.16
TGFBR3-210ENST00000533089 ERBB4Q15303 1308 aa7.78□□□□□ -1.16
TGFBR3-210ENST00000533089 MTIF2P46199 727 aaKnown RBP7.78□□□□□ -1.16
TGFBR3-210ENST00000533089 TTF1Q15361 905 aaPredicted RBP7.78□□□□□ -1.16
TGFBR3-210ENST00000533089 USP48Q86UV5 1035 aa7.78□□□□□ -1.16
TGFBR3-210ENST00000533089 ZNF280CQ8ND82 737 aa7.78□□□□□ -1.16
TGFBR3-210ENST00000533089 LARP6Q9BRS8 491 aaKnown RBP7.78□□□□□ -1.16
TGFBR3-210ENST00000533089 PARD3Q8TEW0 1356 aa7.78□□□□□ -1.16
TGFBR3-210ENST00000533089 SNRPA1P09661 255 aaKnown RBP7.78□□□□□ -1.16
TGFBR3-210ENST00000533089 LAMB3Q13751 1172 aa7.78□□□□□ -1.16
TGFBR3-210ENST00000533089 ALDH1L2Q3SY69 923 aa7.78□□□□□ -1.16
TGFBR3-210ENST00000533089 KIAA0825Q8IV33 1275 aa7.78□□□□□ -1.16
TGFBR3-210ENST00000533089 SETDB2Q96T68 719 aa7.78□□□□□ -1.16
TGFBR3-210ENST00000533089 PDE11AQ9HCR9 933 aa7.78□□□□□ -1.16
TGFBR3-210ENST00000533089 ANKARQ7Z5J8 1434 aa7.78□□□□□ -1.16
TGFBR3-210ENST00000533089 BIN1O00499 593 aa7.78□□□□□ -1.16
TGFBR3-210ENST00000533089 YEATS4O95619 227 aa7.78□□□□□ -1.16
TGFBR3-210ENST00000533089 ARL1P40616 181 aaPredicted RBP7.78□□□□□ -1.16
TGFBR3-210ENST00000533089 GSTO1P78417 241 aa7.78□□□□□ -1.16
TGFBR3-210ENST00000533089 C20orf194Q5TEA3 1177 aa7.78□□□□□ -1.16
TGFBR3-210ENST00000533089 OGFOD1Q8N543 542 aa7.78□□□□□ -1.16
TGFBR3-210ENST00000533089 IFT81Q8WYA0 676 aa7.78□□□□□ -1.16
TGFBR3-210ENST00000533089 TCP11L1Q9NUJ3 509 aa7.78□□□□□ -1.16
TGFBR3-210ENST00000533089 USP21Q9UK80 565 aa7.78□□□□□ -1.16
TGFBR3-210ENST00000533089 MAP3K4Q9Y6R4 1608 aa7.78□□□□□ -1.16
TGFBR3-210ENST00000533089 UNC13BO14795 1591 aa7.78□□□□□ -1.16
TGFBR3-210ENST00000533089 ZNF569Q5MCW4 686 aa7.78□□□□□ -1.16
TGFBR3-210ENST00000533089 FLCNQ8NFG4 579 aa7.78□□□□□ -1.16
TGFBR3-210ENST00000533089 LZTFL1Q9NQ48 299 aa7.78□□□□□ -1.16
TGFBR3-210ENST00000533089 PPANQ9NQ55 473 aaKnown RBP7.78□□□□□ -1.16
TGFBR3-210ENST00000533089 PPP1R9AQ9ULJ8 1098 aa7.78□□□□□ -1.16
TGFBR3-210ENST00000533089 SSX2IPQ9Y2D8 614 aa7.78□□□□□ -1.16
TGFBR3-210ENST00000533089 PPFIA3O75145 1194 aa7.77□□□□□ -1.16
TGFBR3-210ENST00000533089 HHATQ5VTY9 493 aa7.77□□□□□ -1.16
TGFBR3-210ENST00000533089 STXBP4Q6ZWJ1 553 aa7.77□□□□□ -1.16
TGFBR3-210ENST00000533089 CEP70Q8NHQ1 597 aa7.77□□□□□ -1.16
TGFBR3-210ENST00000533089 CRNKL1Q9BZJ0 848 aaKnown RBP7.77□□□□□ -1.16
TGFBR3-210ENST00000533089 DNAJC25Q9H1X3 360 aa7.77□□□□□ -1.16
TGFBR3-210ENST00000533089 BICC1Q9H694 974 aaKnown RBP7.77□□□□□ -1.16
TGFBR3-210ENST00000533089 RHBDL2Q9NX52 303 aa7.77□□□□□ -1.16
TGFBR3-210ENST00000533089 MTUS1Q9ULD2 1270 aa7.77□□□□□ -1.16
TGFBR3-210ENST00000533089 PTPRMP28827 1452 aa7.77□□□□□ -1.17
TGFBR3-210ENST00000533089 SYNMO15061 1565 aa7.77□□□□□ -1.17
TGFBR3-210ENST00000533089 ADGRB3O60242 1522 aa7.77□□□□□ -1.17
TGFBR3-210ENST00000533089 SNUPNO95149 360 aaKnown RBP7.77□□□□□ -1.17
TGFBR3-210ENST00000533089 SLFN5Q08AF3 891 aa7.77□□□□□ -1.17
TGFBR3-210ENST00000533089 HSP90AA5PQ58FG0 334 aa7.77□□□□□ -1.17
TGFBR3-210ENST00000533089 NBPF14Q5TI25 921 aa7.77□□□□□ -1.17
TGFBR3-210ENST00000533089 MFSD6Q6ZSS7 791 aa7.77□□□□□ -1.17
TGFBR3-210ENST00000533089 SCAND2PQ9GZW5 306 aaPredicted RBP7.77□□□□□ -1.17
TGFBR3-210ENST00000533089 IQSEC3Q9UPP2 1182 aaPredicted RBP7.77□□□□□ -1.17
TGFBR3-210ENST00000533089 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.77□□□□□ -1.17
TGFBR3-210ENST00000533089 INO80Q9ULG1 1556 aaPredicted RBP7.77□□□□□ -1.17
TGFBR3-210ENST00000533089 PLA2R1Q13018 1463 aa7.77□□□□□ -1.17
TGFBR3-210ENST00000533089 TSPY3P0CV98 308 aa7.77□□□□□ -1.17
TGFBR3-210ENST00000533089 TSPY8P0CW00 308 aa7.77□□□□□ -1.17
TGFBR3-210ENST00000533089 STMN1P16949 149 aa7.77□□□□□ -1.17
TGFBR3-210ENST00000533089 CUL3Q13618 768 aa7.77□□□□□ -1.17
TGFBR3-210ENST00000533089 EXOC4Q96A65 974 aa7.77□□□□□ -1.17
TGFBR3-210ENST00000533089 SYNCQ9H7C4 482 aa7.77□□□□□ -1.17
TGFBR3-210ENST00000533089 FAM204AQ9H8W3 233 aa7.77□□□□□ -1.17
TGFBR3-210ENST00000533089 HELLSQ9NRZ9 838 aa7.77□□□□□ -1.17
TGFBR3-210ENST00000533089 EIF4E1BA6NMX2 242 aaKnown RBP7.77□□□□□ -1.17
TGFBR3-210ENST00000533089 NBPF7P0C2Y1 421 aaPredicted RBP7.77□□□□□ -1.17
TGFBR3-210ENST00000533089 UBE3BQ7Z3V4 1068 aa7.77□□□□□ -1.17
TGFBR3-210ENST00000533089 UTP14AQ9BVJ6 771 aaKnown RBP7.77□□□□□ -1.17
TGFBR3-210ENST00000533089 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.77□□□□□ -1.171e-6■■■□□ 14.7
TGFBR3-210ENST00000533089 STX8Q9UNK0 236 aa7.77□□□□□ -1.17
TGFBR3-210ENST00000533089 S100BP04271 92 aaPredicted RBP7.77□□□□□ -1.17
TGFBR3-210ENST00000533089 RFX1P22670 979 aa7.77□□□□□ -1.17
TGFBR3-210ENST00000533089 ZNF445P59923 1031 aa7.77□□□□□ -1.17
TGFBR3-210ENST00000533089 MICU3Q86XE3 530 aa7.77□□□□□ -1.17
TGFBR3-210ENST00000533089 DDX41Q9UJV9 622 aaKnown RBP7.77□□□□□ -1.17
TGFBR3-210ENST00000533089 ZMYM4Q5VZL5 1548 aa7.77□□□□□ -1.17
TGFBR3-210ENST00000533089 FSD2A1L4K1 749 aa7.76□□□□□ -1.17
TGFBR3-210ENST00000533089 TBCAO75347 108 aaKnown RBP7.76□□□□□ -1.17
TGFBR3-210ENST00000533089 AMPD3Q01432 767 aa7.76□□□□□ -1.17
TGFBR3-210ENST00000533089 SRLQ86TD4 932 aa7.76□□□□□ -1.17
TGFBR3-210ENST00000533089 IWS1Q96ST2 819 aa7.76□□□□□ -1.17
TGFBR3-210ENST00000533089 CARD14Q9BXL6 1004 aa7.76□□□□□ -1.17
TGFBR3-210ENST00000533089 CNPY2Q9Y2B0 182 aa7.76□□□□□ -1.17
TGFBR3-210ENST00000533089 ZNF131P52739 623 aa7.76□□□□□ -1.17
TGFBR3-210ENST00000533089 UBASH3AP57075 661 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms