RNA–Protein interactions for RNA: ENST00000532962.5

ALKBH3-210, Transcript of alkB homolog 3, alpha-ketoglutaratedependent dioxygenase, humanhuman

TSL 1 (best)

Gene ALKBH3, Length 1,371 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKBH3-210ENST00000532962 PSME4Q14997 1843 aa21.31■■□□□ 1
ALKBH3-210ENST00000532962 PRDM1O75626 825 aa21.3■■□□□ 1
ALKBH3-210ENST00000532962 BRD1O95696 1058 aa21.3■■□□□ 1
ALKBH3-210ENST00000532962 RSBN1LQ6PCB5 846 aaPredicted RBP21.3■■□□□ 1
ALKBH3-210ENST00000532962 SGMS1Q86VZ5 419 aa21.3■■□□□ 1
ALKBH3-210ENST00000532962 IQCA1Q86XH1 822 aa21.3■■□□□ 1
ALKBH3-210ENST00000532962 MKNK2Q9HBH9 465 aa21.3■■□□□ 1
ALKBH3-210ENST00000532962 FOCADQ5VW36 1801 aa21.29■■□□□ 1
ALKBH3-210ENST00000532962 FER1L6Q2WGJ9 1857 aa21.29■■□□□ 1
ALKBH3-210ENST00000532962 MYH1P12882 1939 aa21.29■■□□□ 1
ALKBH3-210ENST00000532962 STX6O43752 255 aa21.29■■□□□ 1
ALKBH3-210ENST00000532962 RAD17O75943 681 aa21.29■■□□□ 1
ALKBH3-210ENST00000532962 SYT1P21579 422 aa21.29■■□□□ 1
ALKBH3-210ENST00000532962 HMGN5P82970 282 aaKnown RBP21.29■■□□□ 1
ALKBH3-210ENST00000532962 SLC4A8Q2Y0W8 1093 aa21.29■■□□□ 1
ALKBH3-210ENST00000532962 APOBEC3HQ6NTF7 200 aaKnown RBP21.29■■□□□ 1
ALKBH3-210ENST00000532962 CDC42EP5Q6NZY7 148 aa21.29■■□□□ 1
ALKBH3-210ENST00000532962 ZKSCAN3Q9BRR0 538 aa21.29■■□□□ 1
ALKBH3-210ENST00000532962 NCOA5Q9HCD5 579 aaKnown RBP21.29■■□□□ 1
ALKBH3-210ENST00000532962 ZDHHC9Q9Y397 364 aa21.29■■□□□ 1
ALKBH3-210ENST00000532962 KIF3AQ9Y496 699 aa21.29■■□□□ 1
ALKBH3-210ENST00000532962 SLC12A7Q9Y666 1083 aa21.29■■□□□ 1
ALKBH3-210ENST00000532962 ZBTB43O43298 467 aa21.28■■□□□ 1
ALKBH3-210ENST00000532962 VIL1P09327 827 aaKnown RBP21.28■■□□□ 1
ALKBH3-210ENST00000532962 MCM4P33991 863 aa21.28■■□□□ 1
ALKBH3-210ENST00000532962 PICALMQ13492 652 aa21.28■■□□□ 1
ALKBH3-210ENST00000532962 FOXD4L5Q5VV16 416 aaPredicted RBP21.28■■□□□ 1
ALKBH3-210ENST00000532962 LARP1BQ659C4 914 aaKnown RBP21.28■■□□□ 1
ALKBH3-210ENST00000532962 FAM184AQ8NB25 1140 aa21.28■■□□□ 1
ALKBH3-210ENST00000532962 FOXD4L4Q8WXT5 416 aaPredicted RBP21.28■■□□□ 1
ALKBH3-210ENST00000532962 JDP2Q8WYK2 163 aa21.28■■□□□ 1
ALKBH3-210ENST00000532962 ROBO3Q96MS0 1386 aa21.28■■□□□ 1
ALKBH3-210ENST00000532962 ZSCAN10Q96SZ4 725 aaPredicted RBP21.28■■□□□ 1
ALKBH3-210ENST00000532962 PSMD14O00487 310 aa21.27■■□□□ 1
ALKBH3-210ENST00000532962 CPLX1O14810 134 aa21.27■■□□□ 1
ALKBH3-210ENST00000532962 METAP2P50579 478 aaKnown RBP eCLIP21.27■■□□□ 1
ALKBH3-210ENST00000532962 EVX2Q03828 476 aa21.27■■□□□ 1
ALKBH3-210ENST00000532962 APOA5Q6Q788 366 aa21.27■■□□□ 1
ALKBH3-210ENST00000532962 TTC6Q86TZ1 520 aa21.27■■□□□ 1
ALKBH3-210ENST00000532962 ZNF444Q8N0Y2 327 aaPredicted RBP21.27■■□□□ 1
ALKBH3-210ENST00000532962 NSUN7Q8NE18 718 aaKnown RBP21.27■■□□□ 1
ALKBH3-210ENST00000532962 HDAC9Q9UKV0 1011 aa21.27■■□□□ 1
ALKBH3-210ENST00000532962 HPS5Q9UPZ3 1129 aa21.27■■□□□ 1
ALKBH3-210ENST00000532962 ADAMTSL1Q8N6G6 1762 aa21.27■■□□□ 1
ALKBH3-210ENST00000532962 TNKSO95271 1327 aa21.26■□□□□ 0.99
ALKBH3-210ENST00000532962 TSPY2A6NKD2 308 aa21.26■□□□□ 0.99
ALKBH3-210ENST00000532962 JAK2O60674 1132 aa21.26■□□□□ 0.99
ALKBH3-210ENST00000532962 ZSCAN22P10073 491 aaPredicted RBP21.26■□□□□ 0.99
ALKBH3-210ENST00000532962 PLCD1P51178 756 aa21.26■□□□□ 0.99
ALKBH3-210ENST00000532962 CPLX2Q6PUV4 134 aaKnown RBP21.26■□□□□ 0.99
ALKBH3-210ENST00000532962 CLEC17AQ6ZS10 378 aa21.26■□□□□ 0.99
ALKBH3-210ENST00000532962 SMARCC2Q8TAQ2 1214 aa21.26■□□□□ 0.99
ALKBH3-210ENST00000532962 DYNLL2Q96FJ2 89 aa21.26■□□□□ 0.99
ALKBH3-210ENST00000532962 ECM29Q5VYK3 1845 aa21.26■□□□□ 0.99
ALKBH3-210ENST00000532962 LTBP3Q9NS15 1303 aa21.25■□□□□ 0.99
ALKBH3-210ENST00000532962 PTPDC1A2A3K4 754 aa21.25■□□□□ 0.99
ALKBH3-210ENST00000532962 DDX11L8A8MPP1 907 aa21.25■□□□□ 0.99
ALKBH3-210ENST00000532962 GOLGA6L22H0YM25 854 aa21.25■□□□□ 0.99
ALKBH3-210ENST00000532962 DTNBO60941 627 aa21.25■□□□□ 0.99
ALKBH3-210ENST00000532962 WDHD1O75717 1129 aaPredicted RBP21.25■□□□□ 0.99
ALKBH3-210ENST00000532962 RAB11FIP4Q86YS3 637 aa21.25■□□□□ 0.99
ALKBH3-210ENST00000532962 NLGN2Q8NFZ4 835 aa21.25■□□□□ 0.99
ALKBH3-210ENST00000532962 DDX11Q96FC9 970 aa21.25■□□□□ 0.99
ALKBH3-210ENST00000532962 SENP2Q9HC62 589 aa21.25■□□□□ 0.99
ALKBH3-210ENST00000532962 DDX60LQ5H9U9 1706 aaKnown RBP21.25■□□□□ 0.99
ALKBH3-210ENST00000532962 COL4A5P29400 1685 aa21.25■□□□□ 0.99
ALKBH3-210ENST00000532962 GOLGA8AA7E2F4 631 aa21.24■□□□□ 0.99
ALKBH3-210ENST00000532962 NFKBIEO00221 500 aa21.24■□□□□ 0.99
ALKBH3-210ENST00000532962 CDKL5O76039 1030 aa21.24■□□□□ 0.99
ALKBH3-210ENST00000532962 BAG4O95429 457 aaKnown RBP21.24■□□□□ 0.99
ALKBH3-210ENST00000532962 CTDNEP1O95476 244 aa21.24■□□□□ 0.99
ALKBH3-210ENST00000532962 SEC23AQ15436 765 aa21.24■□□□□ 0.99
ALKBH3-210ENST00000532962 CFAP100Q494V2 611 aa21.24■□□□□ 0.99
ALKBH3-210ENST00000532962 CCDC178Q5BJE1 867 aa21.24■□□□□ 0.99
ALKBH3-210ENST00000532962 FAM47AQ5JRC9 791 aa21.24■□□□□ 0.99
ALKBH3-210ENST00000532962 IFIT1BQ5T764 474 aaKnown RBP21.24■□□□□ 0.99
ALKBH3-210ENST00000532962 C16orf86Q6ZW13 317 aa21.24■□□□□ 0.99
ALKBH3-210ENST00000532962 OGFOD1Q8N543 542 aa21.24■□□□□ 0.99
ALKBH3-210ENST00000532962 VPS37CA5D8V6 355 aaPredicted RBP21.23■□□□□ 0.99
ALKBH3-210ENST00000532962 PTMSP20962 102 aa21.23■□□□□ 0.99
ALKBH3-210ENST00000532962 TFAP4Q01664 338 aa21.23■□□□□ 0.99
ALKBH3-210ENST00000532962 TNIP1Q15025 636 aa21.23■□□□□ 0.99
ALKBH3-210ENST00000532962 MICU3Q86XE3 530 aa21.23■□□□□ 0.99
ALKBH3-210ENST00000532962 ENAHQ8N8S7 591 aaPredicted RBP21.23■□□□□ 0.99
ALKBH3-210ENST00000532962 AGBL3Q8NEM8 1001 aa21.23■□□□□ 0.99
ALKBH3-210ENST00000532962 ARFGEF1Q9Y6D6 1849 aa21.23■□□□□ 0.99
ALKBH3-210ENST00000532962 HLA-DOAP06340 250 aa21.23■□□□□ 0.99
ALKBH3-210ENST00000532962 CDK8P49336 464 aa21.23■□□□□ 0.99
ALKBH3-210ENST00000532962 RCAN1P53805 252 aa21.23■□□□□ 0.99
ALKBH3-210ENST00000532962 CIAPIN1Q6FI81 312 aa21.23■□□□□ 0.99
ALKBH3-210ENST00000532962 CATIPQ7Z7H3 387 aa21.23■□□□□ 0.99
ALKBH3-210ENST00000532962 GMLQ99445 158 aa21.23■□□□□ 0.99
ALKBH3-210ENST00000532962 OSBPL5Q9H0X9 879 aaPredicted RBP21.23■□□□□ 0.99
ALKBH3-210ENST00000532962 DDX4Q9NQI0 724 aaKnown RBP21.23■□□□□ 0.99
ALKBH3-210ENST00000532962 MTMR6Q9Y217 621 aa21.23■□□□□ 0.99
ALKBH3-210ENST00000532962 ATP6V1DQ9Y5K8 247 aa21.23■□□□□ 0.99
ALKBH3-210ENST00000532962 CCDC196A0A1B0GTZ2 297 aa21.22■□□□□ 0.99
ALKBH3-210ENST00000532962 H3BQV1 296 aa21.22■□□□□ 0.99
ALKBH3-210ENST00000532962 TSPY3P0CV98 308 aa21.22■□□□□ 0.99
ALKBH3-210ENST00000532962 TSPY8P0CW00 308 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms