RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 FRMD3A2A2Y4 597 aa7.7□□□□□ -1.18
TGFBR3-209ENST00000532540 CCDC151A5D8V7 595 aa7.7□□□□□ -1.18
TGFBR3-209ENST00000532540 OPA1O60313 960 aa7.7□□□□□ -1.18
TGFBR3-209ENST00000532540 PRR29P0C7W0 189 aa7.7□□□□□ -1.18
TGFBR3-209ENST00000532540 PSEN1P49768 467 aa7.7□□□□□ -1.18
TGFBR3-209ENST00000532540 PDIA6Q15084 440 aa7.7□□□□□ -1.18
TGFBR3-209ENST00000532540 PARP10Q53GL7 1025 aa7.7□□□□□ -1.18
TGFBR3-209ENST00000532540 ODF2Q5BJF6 829 aa7.7□□□□□ -1.18
TGFBR3-209ENST00000532540 PI16Q6UXB8 463 aa7.7□□□□□ -1.18
TGFBR3-209ENST00000532540 DPP8Q6V1X1 898 aaPredicted RBP7.7□□□□□ -1.18
TGFBR3-209ENST00000532540 LARGE2Q8N3Y3 721 aa7.7□□□□□ -1.18
TGFBR3-209ENST00000532540 MIGA1Q8NAN2 632 aa7.7□□□□□ -1.18
TGFBR3-209ENST00000532540 CELF1Q92879 486 aaKnown RBP7.7□□□□□ -1.18
TGFBR3-209ENST00000532540 SH3GL3Q99963 347 aa7.7□□□□□ -1.18
TGFBR3-209ENST00000532540 ESYT1Q9BSJ8 1104 aa7.7□□□□□ -1.18
TGFBR3-209ENST00000532540 RABEP2Q9H5N1 569 aa7.7□□□□□ -1.18
TGFBR3-209ENST00000532540 DBNDD1Q9H9R9 158 aa7.7□□□□□ -1.18
TGFBR3-209ENST00000532540 PSD3Q9NYI0 1048 aa7.7□□□□□ -1.18
TGFBR3-209ENST00000532540 CLEC11AQ9Y240 323 aa7.7□□□□□ -1.18
TGFBR3-209ENST00000532540 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.7□□□□□ -1.18
TGFBR3-209ENST00000532540 SOS1Q07889 1333 aaPredicted RBP7.7□□□□□ -1.18
TGFBR3-209ENST00000532540 A6NNZ2 444 aa7.7□□□□□ -1.18
TGFBR3-209ENST00000532540 ATP8B2P98198 1209 aa7.7□□□□□ -1.18
TGFBR3-209ENST00000532540 ENOX2Q16206 610 aaKnown RBP7.7□□□□□ -1.18
TGFBR3-209ENST00000532540 TUBB8Q3ZCM7 444 aa7.7□□□□□ -1.18
TGFBR3-209ENST00000532540 ZBTB38Q8NAP3 1195 aaPredicted RBP7.7□□□□□ -1.18
TGFBR3-209ENST00000532540 TDRD7Q8NHU6 1098 aaKnown RBP7.7□□□□□ -1.18
TGFBR3-209ENST00000532540 BCAS4Q8TDM0 211 aa7.7□□□□□ -1.18
TGFBR3-209ENST00000532540 ARHGAP45Q92619 1136 aa7.7□□□□□ -1.18
TGFBR3-209ENST00000532540 BABAM1Q9NWV8 329 aa7.7□□□□□ -1.18
TGFBR3-209ENST00000532540 FMN2Q9NZ56 1722 aa7.7□□□□□ -1.18
TGFBR3-209ENST00000532540 USP32Q8NFA0 1604 aa7.69□□□□□ -1.18
TGFBR3-209ENST00000532540 GOLGA6CA6NDK9 693 aa7.69□□□□□ -1.18
TGFBR3-209ENST00000532540 ZEB2O60315 1214 aa7.69□□□□□ -1.18
TGFBR3-209ENST00000532540 ATP2C2O75185 946 aa7.69□□□□□ -1.18
TGFBR3-209ENST00000532540 GOLGA6DP0CG33 693 aa7.69□□□□□ -1.18
TGFBR3-209ENST00000532540 ELF1P32519 619 aa7.69□□□□□ -1.18
TGFBR3-209ENST00000532540 CTSWP56202 376 aa7.69□□□□□ -1.18
TGFBR3-209ENST00000532540 UBASH3AP57075 661 aa7.69□□□□□ -1.18
TGFBR3-209ENST00000532540 CORO7P57737 925 aa7.69□□□□□ -1.18
TGFBR3-209ENST00000532540 BLOC1S2Q6QNY1 142 aa7.69□□□□□ -1.18
TGFBR3-209ENST00000532540 FSIP1Q8NA03 581 aa7.69□□□□□ -1.18
TGFBR3-209ENST00000532540 CLSTN2Q9H4D0 955 aa7.69□□□□□ -1.18
TGFBR3-209ENST00000532540 FAM204AQ9H8W3 233 aa7.69□□□□□ -1.18
TGFBR3-209ENST00000532540 GOLGA6AQ9NYA3 693 aa7.69□□□□□ -1.18
TGFBR3-209ENST00000532540 CDC25BP30305 580 aa7.69□□□□□ -1.18
TGFBR3-209ENST00000532540 PLA2G4AP47712 749 aa7.69□□□□□ -1.18
TGFBR3-209ENST00000532540 CC2D1AQ6P1N0 951 aaPredicted RBP7.69□□□□□ -1.18
TGFBR3-209ENST00000532540 CCAR1Q8IX12 1150 aaKnown RBP7.69□□□□□ -1.18
TGFBR3-209ENST00000532540 PROM2Q8N271 834 aa7.69□□□□□ -1.18
TGFBR3-209ENST00000532540 ANKRD44Q8N8A2 993 aa7.69□□□□□ -1.18
TGFBR3-209ENST00000532540 ZDHHC9Q9Y397 364 aa7.69□□□□□ -1.18
TGFBR3-209ENST00000532540 MINDY4BA8MYZ0 360 aa7.69□□□□□ -1.18
TGFBR3-209ENST00000532540 KIF4AO95239 1232 aa7.69□□□□□ -1.18
TGFBR3-209ENST00000532540 SLC5A1P13866 664 aa7.69□□□□□ -1.18
TGFBR3-209ENST00000532540 BCAMP50895 628 aa7.69□□□□□ -1.18
TGFBR3-209ENST00000532540 WWC2Q6AWC2 1192 aa7.69□□□□□ -1.18
TGFBR3-209ENST00000532540 DZIP1Q86YF9 867 aaKnown RBP7.69□□□□□ -1.18
TGFBR3-209ENST00000532540 EGFL6Q8IUX8 553 aa7.69□□□□□ -1.18
TGFBR3-209ENST00000532540 SUGP1Q8IWZ8 645 aaKnown RBP7.69□□□□□ -1.18
TGFBR3-209ENST00000532540 KIF2CQ99661 725 aa7.69□□□□□ -1.18
TGFBR3-209ENST00000532540 PLEKHA4Q9H4M7 779 aa7.69□□□□□ -1.18
TGFBR3-209ENST00000532540 ZNF408Q9H9D4 720 aa7.69□□□□□ -1.18
TGFBR3-209ENST00000532540 PIK3C2AO00443 1686 aa7.68□□□□□ -1.18
TGFBR3-209ENST00000532540 PPIP5K2O43314 1243 aa7.68□□□□□ -1.18
TGFBR3-209ENST00000532540 RAD17O75943 681 aa7.68□□□□□ -1.18
TGFBR3-209ENST00000532540 HAND2P61296 217 aa7.68□□□□□ -1.18
TGFBR3-209ENST00000532540 SLC27A3Q5K4L6 730 aa7.68□□□□□ -1.18
TGFBR3-209ENST00000532540 PACS2Q86VP3 889 aa7.68□□□□□ -1.18
TGFBR3-209ENST00000532540 JDP2Q8WYK2 163 aa7.68□□□□□ -1.18
TGFBR3-209ENST00000532540 CTAGE9A4FU28 777 aa7.68□□□□□ -1.18
TGFBR3-209ENST00000532540 WTIPA6NIX2 430 aaPredicted RBP7.68□□□□□ -1.18
TGFBR3-209ENST00000532540 BIN1O00499 593 aa7.68□□□□□ -1.18
TGFBR3-209ENST00000532540 CAMTA2O94983 1202 aa7.68□□□□□ -1.18
TGFBR3-209ENST00000532540 SLC3A2P08195 630 aaKnown RBP7.68□□□□□ -1.18
TGFBR3-209ENST00000532540 ADORA1P30542 326 aa7.68□□□□□ -1.18
TGFBR3-209ENST00000532540 TXLNAP40222 546 aa7.68□□□□□ -1.18
TGFBR3-209ENST00000532540 APOBRQ0VD83 1088 aa7.68□□□□□ -1.18
TGFBR3-209ENST00000532540 PICALMQ13492 652 aa7.68□□□□□ -1.18
TGFBR3-209ENST00000532540 KARSQ15046 597 aaKnown RBP7.68□□□□□ -1.18
TGFBR3-209ENST00000532540 TEX11Q8IYF3 940 aa7.68□□□□□ -1.18
TGFBR3-209ENST00000532540 PPP1R13BQ96KQ4 1090 aa7.68□□□□□ -1.18
TGFBR3-209ENST00000532540 SPON1Q9HCB6 807 aa7.68□□□□□ -1.18
TGFBR3-209ENST00000532540 LCMT1Q9UIC8 334 aa7.68□□□□□ -1.18
TGFBR3-209ENST00000532540 TTC41PQ6P2S7 1318 aa7.68□□□□□ -1.18
TGFBR3-209ENST00000532540 GOLGA6L10A0A0M3HER8 536 aa7.68□□□□□ -1.18
TGFBR3-209ENST00000532540 CCDC175P0C221 793 aa7.68□□□□□ -1.18
TGFBR3-209ENST00000532540 GYS1P13807 737 aa7.68□□□□□ -1.18
TGFBR3-209ENST00000532540 SLC8A1P32418 973 aa7.68□□□□□ -1.18
TGFBR3-209ENST00000532540 CCDC181Q5TID7 509 aa7.68□□□□□ -1.18
TGFBR3-209ENST00000532540 SLC51AQ86UW1 340 aa7.68□□□□□ -1.18
TGFBR3-209ENST00000532540 IQCA1Q86XH1 822 aa7.68□□□□□ -1.18
TGFBR3-209ENST00000532540 SPATS2Q86XZ4 545 aaKnown RBP7.68□□□□□ -1.18
TGFBR3-209ENST00000532540 RBM17Q96I25 401 aaKnown RBP7.68□□□□□ -1.18
TGFBR3-209ENST00000532540 PARD6BQ9BYG5 372 aa7.68□□□□□ -1.18
TGFBR3-209ENST00000532540 TLR7Q9NYK1 1049 aaKnown RBP7.68□□□□□ -1.18
TGFBR3-209ENST00000532540 KCNG1Q9UIX4 513 aa7.68□□□□□ -1.18
TGFBR3-209ENST00000532540 FHOD1Q9Y613 1164 aa7.68□□□□□ -1.18
TGFBR3-209ENST00000532540 CEMIPQ8WUJ3 1361 aa7.67□□□□□ -1.18
TGFBR3-209ENST00000532540 EYA2O00167 538 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms