RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 TRIM6Q9C030 488 aaPredicted RBP12.76□□□□□ -0.37
PTPRK-221ENST00000532331 SEC31BQ9NQW1 1179 aa12.76□□□□□ -0.37
PTPRK-221ENST00000532331 V9GY48 417 aaPredicted RBP12.76□□□□□ -0.37
PTPRK-221ENST00000532331 GNPTABQ3T906 1256 aa12.76□□□□□ -0.37
PTPRK-221ENST00000532331 LRSAM1Q6UWE0 723 aa12.76□□□□□ -0.37
PTPRK-221ENST00000532331 NLRX1Q86UT6 975 aa12.76□□□□□ -0.37
PTPRK-221ENST00000532331 SMC5Q8IY18 1101 aa12.76□□□□□ -0.37
PTPRK-221ENST00000532331 ANKRD35Q8N283 1001 aa12.76□□□□□ -0.37
PTPRK-221ENST00000532331 C2orf69Q8N8R5 385 aa12.76□□□□□ -0.37
PTPRK-221ENST00000532331 CCDC113Q9H0I3 377 aa12.76□□□□□ -0.37
PTPRK-221ENST00000532331 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.76□□□□□ -0.37
PTPRK-221ENST00000532331 CYP27B1O15528 508 aa12.75□□□□□ -0.37
PTPRK-221ENST00000532331 ABCB5Q2M3G0 1257 aa12.75□□□□□ -0.37
PTPRK-221ENST00000532331 CLTCQ00610 1675 aaKnown RBP12.75□□□□□ -0.37
PTPRK-221ENST00000532331 FLOT1O75955 427 aa12.75□□□□□ -0.37
PTPRK-221ENST00000532331 ALAS1P13196 640 aa12.75□□□□□ -0.37
PTPRK-221ENST00000532331 RFX1P22670 979 aa12.75□□□□□ -0.37
PTPRK-221ENST00000532331 SMTNP53814 917 aa12.75□□□□□ -0.37
PTPRK-221ENST00000532331 ATG3Q9NT62 314 aa12.75□□□□□ -0.37
PTPRK-221ENST00000532331 C1orf167Q5SNV9 1468 aa12.75□□□□□ -0.37
PTPRK-221ENST00000532331 ALKQ9UM73 1620 aa12.75□□□□□ -0.37
PTPRK-221ENST00000532331 SPOUT1Q5T280 376 aaKnown RBP12.75□□□□□ -0.37
PTPRK-221ENST00000532331 DHX58Q96C10 678 aa12.75□□□□□ -0.37
PTPRK-221ENST00000532331 POTEB2H3BUK9 544 aa12.75□□□□□ -0.37
PTPRK-221ENST00000532331 PSMA7O14818 248 aa12.75□□□□□ -0.37
PTPRK-221ENST00000532331 IFI16Q16666 785 aaKnown RBP12.75□□□□□ -0.37
PTPRK-221ENST00000532331 HAUS3Q68CZ6 603 aa12.75□□□□□ -0.37
PTPRK-221ENST00000532331 DPP9Q86TI2 863 aa12.75□□□□□ -0.37
PTPRK-221ENST00000532331 C16orf45Q96MC5 204 aaPredicted RBP12.75□□□□□ -0.37
PTPRK-221ENST00000532331 USP44Q9H0E7 712 aa12.75□□□□□ -0.37
PTPRK-221ENST00000532331 AXIN2Q9Y2T1 843 aa12.75□□□□□ -0.37
PTPRK-221ENST00000532331 DDX39AO00148 427 aaKnown RBP12.75□□□□□ -0.37
PTPRK-221ENST00000532331 AK2P54819 239 aa12.75□□□□□ -0.37
PTPRK-221ENST00000532331 UBASH3AP57075 661 aa12.75□□□□□ -0.37
PTPRK-221ENST00000532331 ZNF354CQ86Y25 554 aa12.75□□□□□ -0.37
PTPRK-221ENST00000532331 EHBP1Q8NDI1 1231 aa12.75□□□□□ -0.37
PTPRK-221ENST00000532331 PRAMEF22A3QJZ6 481 aa12.74□□□□□ -0.37
PTPRK-221ENST00000532331 CCT6AP40227 531 aaKnown RBP12.74□□□□□ -0.37
PTPRK-221ENST00000532331 USP14P54578 494 aa12.74□□□□□ -0.37
PTPRK-221ENST00000532331 ARHGEF16Q5VV41 709 aa12.74□□□□□ -0.37
PTPRK-221ENST00000532331 DPH6Q7L8W6 267 aa12.74□□□□□ -0.37
PTPRK-221ENST00000532331 SLC10A4Q96EP9 437 aa12.74□□□□□ -0.37
PTPRK-221ENST00000532331 FAM227BQ96M60 508 aa12.74□□□□□ -0.37
PTPRK-221ENST00000532331 PPP2R5BQ15173 497 aa12.74□□□□□ -0.37
PTPRK-221ENST00000532331 MLXIPQ9HAP2 919 aa12.74□□□□□ -0.37
PTPRK-221ENST00000532331 STK24Q9Y6E0 443 aa12.74□□□□□ -0.37
PTPRK-221ENST00000532331 SPTLC2O15270 562 aa12.74□□□□□ -0.37
PTPRK-221ENST00000532331 AKR1B10O60218 316 aa12.74□□□□□ -0.37
PTPRK-221ENST00000532331 SNW1Q13573 536 aaKnown RBP12.74□□□□□ -0.37
PTPRK-221ENST00000532331 AKNAD1Q5T1N1 836 aa12.74□□□□□ -0.37
PTPRK-221ENST00000532331 TMX1Q9H3N1 280 aa12.74□□□□□ -0.37
PTPRK-221ENST00000532331 CCDC169A6NNP5 214 aa12.74□□□□□ -0.37
PTPRK-221ENST00000532331 GCOM1H8Y6P7 765 aaPredicted RBP12.74□□□□□ -0.37
PTPRK-221ENST00000532331 MYZAPP0CAP1 466 aa12.74□□□□□ -0.37
PTPRK-221ENST00000532331 KCTD2Q14681 263 aa12.74□□□□□ -0.37
PTPRK-221ENST00000532331 BRAPQ7Z569 592 aa12.74□□□□□ -0.37
PTPRK-221ENST00000532331 SPAG5Q96R06 1193 aa12.74□□□□□ -0.37
PTPRK-221ENST00000532331 NBPF3Q9H094 633 aa12.74□□□□□ -0.37
PTPRK-221ENST00000532331 ATP10DQ9P241 1426 aa12.74□□□□□ -0.37
PTPRK-221ENST00000532331 CCNT1O60563 726 aaKnown RBP12.73□□□□□ -0.37
PTPRK-221ENST00000532331 CIAO1O76071 339 aa12.73□□□□□ -0.37
PTPRK-221ENST00000532331 HARSP12081 509 aaKnown RBP12.73□□□□□ -0.37
PTPRK-221ENST00000532331 CAMSAP1Q5T5Y3 1602 aa12.73□□□□□ -0.37
PTPRK-221ENST00000532331 SLC27A2O14975 620 aa12.73□□□□□ -0.37
PTPRK-221ENST00000532331 STRN3Q13033 797 aa12.73□□□□□ -0.37
PTPRK-221ENST00000532331 PRPF4BQ13523 1007 aaKnown RBP12.73□□□□□ -0.37
PTPRK-221ENST00000532331 SUSD4Q5VX71 490 aa12.73□□□□□ -0.37
PTPRK-221ENST00000532331 GTPBP4Q9BZE4 634 aaKnown RBP12.73□□□□□ -0.37
PTPRK-221ENST00000532331 COA1Q9GZY4 146 aa12.73□□□□□ -0.37
PTPRK-221ENST00000532331 IQGAP3Q86VI3 1631 aa12.73□□□□□ -0.37
PTPRK-221ENST00000532331 COL15A1P39059 1388 aa12.73□□□□□ -0.37
PTPRK-221ENST00000532331 PDE6AP16499 860 aa12.73□□□□□ -0.37
PTPRK-221ENST00000532331 ARHGEF1Q92888 912 aaKnown RBP12.73□□□□□ -0.37
PTPRK-221ENST00000532331 GLG1Q92896 1179 aa12.73□□□□□ -0.37
PTPRK-221ENST00000532331 MRPL11Q9Y3B7 192 aaKnown RBP12.73□□□□□ -0.37
PTPRK-221ENST00000532331 GRIN3BO60391 1043 aa12.73□□□□□ -0.37
PTPRK-221ENST00000532331 CDAN1Q8IWY9 1227 aa12.73□□□□□ -0.37
PTPRK-221ENST00000532331 CARMIL3Q8ND23 1372 aa12.73□□□□□ -0.37
PTPRK-221ENST00000532331 KCNQ2O43526 872 aa12.73□□□□□ -0.37
PTPRK-221ENST00000532331 RPS6KB1P23443 525 aa12.73□□□□□ -0.37
PTPRK-221ENST00000532331 DNM1Q05193 864 aaKnown RBP12.73□□□□□ -0.37
PTPRK-221ENST00000532331 ANO6Q4KMQ2 910 aa12.73□□□□□ -0.37
PTPRK-221ENST00000532331 CCDC117Q8IWD4 279 aaPredicted RBP12.73□□□□□ -0.37
PTPRK-221ENST00000532331 ARHGEF35A5YM69 484 aa12.72□□□□□ -0.37
PTPRK-221ENST00000532331 MAP2K1Q02750 393 aaPredicted RBP12.72□□□□□ -0.37
PTPRK-221ENST00000532331 ZNF174Q15697 407 aa12.72□□□□□ -0.37
PTPRK-221ENST00000532331 KRT25Q7Z3Z0 450 aa12.72□□□□□ -0.37
PTPRK-221ENST00000532331 MCF2L2Q86YR7 1114 aa12.72□□□□□ -0.37
PTPRK-221ENST00000532331 DACT1Q9NYF0 836 aa12.72□□□□□ -0.37
PTPRK-221ENST00000532331 PRKAG2Q9UGJ0 569 aa12.72□□□□□ -0.37
PTPRK-221ENST00000532331 MRVI1Q9Y6F6 885 aa12.72□□□□□ -0.37
PTPRK-221ENST00000532331 PHKA1P46020 1223 aa12.72□□□□□ -0.37
PTPRK-221ENST00000532331 HLTFQ14527 1009 aaKnown RBP eCLIP12.72□□□□□ -0.37
PTPRK-221ENST00000532331 PIK3AP1Q6ZUJ8 805 aa12.72□□□□□ -0.37
PTPRK-221ENST00000532331 CCDC65Q8IXS2 484 aa12.72□□□□□ -0.37
PTPRK-221ENST00000532331 SHTN1A0MZ66 631 aa12.72□□□□□ -0.37
PTPRK-221ENST00000532331 MKRN3Q13064 507 aaKnown RBP12.72□□□□□ -0.37
PTPRK-221ENST00000532331 NCAPH2Q6IBW4 605 aa12.72□□□□□ -0.37
PTPRK-221ENST00000532331 SDR42E1Q8WUS8 393 aa12.72□□□□□ -0.37
PTPRK-221ENST00000532331 SWAP70Q9UH65 585 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms