RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 HERC5Q9UII4 1024 aaKnown RBP27.23■■□□□ 1.95
TRAPPC4-210ENST00000531290 AK9Q5TCS8 1911 aa27.22■■□□□ 1.95
TRAPPC4-210ENST00000531290 MYCP01106 439 aaPredicted RBP27.22■■□□□ 1.95
TRAPPC4-210ENST00000531290 HSP90AB4PQ58FF6 505 aa27.22■■□□□ 1.95
TRAPPC4-210ENST00000531290 CCDC84Q86UT8 332 aaPredicted RBP27.22■■□□□ 1.95
TRAPPC4-210ENST00000531290 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.22■■□□□ 1.95
TRAPPC4-210ENST00000531290 EXOC6BQ9Y2D4 811 aa27.22■■□□□ 1.95
TRAPPC4-210ENST00000531290 COL2A1P02458 1487 aaPredicted RBP27.21■■□□□ 1.95
TRAPPC4-210ENST00000531290 BCRP11274 1271 aa27.21■■□□□ 1.95
TRAPPC4-210ENST00000531290 OSBPP22059 807 aa27.21■■□□□ 1.95
TRAPPC4-210ENST00000531290 CTGFP29279 349 aa27.21■■□□□ 1.95
TRAPPC4-210ENST00000531290 CAP2P40123 477 aa27.21■■□□□ 1.95
TRAPPC4-210ENST00000531290 MAPKAPK5Q8IW41 473 aa27.21■■□□□ 1.95
TRAPPC4-210ENST00000531290 RAET1EQ8TD07 263 aa27.21■■□□□ 1.95
TRAPPC4-210ENST00000531290 SMCR8Q8TEV9 937 aaPredicted RBP27.21■■□□□ 1.95
TRAPPC4-210ENST00000531290 IDH1O75874 414 aaKnown RBP27.2■■□□□ 1.94
TRAPPC4-210ENST00000531290 CYP7A1P22680 504 aa27.2■■□□□ 1.94
TRAPPC4-210ENST00000531290 FCGRTP55899 365 aa27.2■■□□□ 1.94
TRAPPC4-210ENST00000531290 SPP2Q13103 211 aa27.2■■□□□ 1.94
TRAPPC4-210ENST00000531290 ADGRA1Q86SQ6 560 aa27.2■■□□□ 1.94
TRAPPC4-210ENST00000531290 AACSQ86V21 672 aa27.2■■□□□ 1.94
TRAPPC4-210ENST00000531290 ZNF280CQ8ND82 737 aa27.2■■□□□ 1.94
TRAPPC4-210ENST00000531290 TBC1D2Q9BYX2 928 aa27.2■■□□□ 1.94
TRAPPC4-210ENST00000531290 FOXP4Q8IVH2 680 aaPredicted RBP27.19■■□□□ 1.94
TRAPPC4-210ENST00000531290 TRIM34Q9BYJ4 488 aa27.19■■□□□ 1.94
TRAPPC4-210ENST00000531290 AGTPBP1Q9UPW5 1226 aa27.19■■□□□ 1.94
TRAPPC4-210ENST00000531290 USP17L5A8MUK1 530 aa27.18■■□□□ 1.94
TRAPPC4-210ENST00000531290 CRACR2BQ8N4Y2 399 aaPredicted RBP27.18■■□□□ 1.94
TRAPPC4-210ENST00000531290 FLT1P17948 1338 aa27.17■■□□□ 1.94
TRAPPC4-210ENST00000531290 MYPNQ86TC9 1320 aa27.17■■□□□ 1.94
TRAPPC4-210ENST00000531290 PROCA1Q8NCQ7 364 aaPredicted RBP27.17■■□□□ 1.94
TRAPPC4-210ENST00000531290 AS3MTQ9HBK9 375 aa27.17■■□□□ 1.94
TRAPPC4-210ENST00000531290 PNMA3Q9UL41 463 aa27.17■■□□□ 1.94
TRAPPC4-210ENST00000531290 DDX19BQ9UMR2 479 aa27.17■■□□□ 1.94
TRAPPC4-210ENST00000531290 CENPFP49454 3210 aa27.16■■□□□ 1.94
TRAPPC4-210ENST00000531290 DYNLL1P63167 89 aaKnown RBP27.16■■□□□ 1.94
TRAPPC4-210ENST00000531290 MAP3K12Q12852 859 aa27.16■■□□□ 1.94
TRAPPC4-210ENST00000531290 RRP1BQ14684 758 aaKnown RBP27.16■■□□□ 1.94
TRAPPC4-210ENST00000531290 CERS3Q8IU89 383 aa27.16■■□□□ 1.94
TRAPPC4-210ENST00000531290 RPAP2Q8IXW5 612 aaPredicted RBP27.16■■□□□ 1.94
TRAPPC4-210ENST00000531290 IL1RAPL2Q9NP60 686 aa27.16■■□□□ 1.94
TRAPPC4-210ENST00000531290 PALD1Q9ULE6 856 aa27.16■■□□□ 1.94
TRAPPC4-210ENST00000531290 HMMRO75330 724 aa27.15■■□□□ 1.94
TRAPPC4-210ENST00000531290 GRK4P32298 578 aa27.15■■□□□ 1.94
TRAPPC4-210ENST00000531290 PABPC4Q13310 644 aaKnown RBP eCLIP27.15■■□□□ 1.948e-8■■■■□ 23
TRAPPC4-210ENST00000531290 TREML2Q5T2D2 321 aa27.15■■□□□ 1.94
TRAPPC4-210ENST00000531290 MAGEB6Q8N7X4 407 aa27.15■■□□□ 1.94
TRAPPC4-210ENST00000531290 RHPN1Q8TCX5 695 aa27.15■■□□□ 1.94
TRAPPC4-210ENST00000531290 CHMP4BQ9H444 224 aaKnown RBP27.15■■□□□ 1.94
TRAPPC4-210ENST00000531290 BIN2Q9UBW5 565 aaPredicted RBP27.15■■□□□ 1.94
TRAPPC4-210ENST00000531290 COG6Q9Y2V7 657 aa27.15■■□□□ 1.94
TRAPPC4-210ENST00000531290 DOCK2Q92608 1830 aa27.14■■□□□ 1.94
TRAPPC4-210ENST00000531290 HLA-DOAP06340 250 aa27.14■■□□□ 1.94
TRAPPC4-210ENST00000531290 MIGA1Q8NAN2 632 aa27.14■■□□□ 1.94
TRAPPC4-210ENST00000531290 SAP30BPQ9UHR5 308 aaKnown RBP27.14■■□□□ 1.94
TRAPPC4-210ENST00000531290 NDUFB9Q9Y6M9 179 aa27.14■■□□□ 1.94
TRAPPC4-210ENST00000531290 PDE4DIPQ5VU43 2346 aa27.14■■□□□ 1.94
TRAPPC4-210ENST00000531290 APBB1O00213 710 aa27.13■■□□□ 1.93
TRAPPC4-210ENST00000531290 SLC34A2O95436 690 aa27.13■■□□□ 1.93
TRAPPC4-210ENST00000531290 ASNSP08243 561 aa27.13■■□□□ 1.93
TRAPPC4-210ENST00000531290 HMGCS2P54868 508 aa27.13■■□□□ 1.93
TRAPPC4-210ENST00000531290 PRKCZQ05513 592 aa27.13■■□□□ 1.93
TRAPPC4-210ENST00000531290 TMED8Q6PL24 325 aaPredicted RBP27.13■■□□□ 1.93
TRAPPC4-210ENST00000531290 METTL16Q86W50 562 aaKnown RBP27.13■■□□□ 1.93
TRAPPC4-210ENST00000531290 CLASRPQ8N2M8 674 aaKnown RBP27.13■■□□□ 1.93
TRAPPC4-210ENST00000531290 ANTXR1Q9H6X2 564 aa27.13■■□□□ 1.93
TRAPPC4-210ENST00000531290 RCAN3Q9UKA8 241 aa27.13■■□□□ 1.93
TRAPPC4-210ENST00000531290 USP5P45974 858 aa27.12■■□□□ 1.93
TRAPPC4-210ENST00000531290 KIF1BPQ96EK5 621 aa27.12■■□□□ 1.93
TRAPPC4-210ENST00000531290 WDR18Q9BV38 432 aa27.12■■□□□ 1.93
TRAPPC4-210ENST00000531290 ZBTB40Q9NUA8 1239 aa27.12■■□□□ 1.93
TRAPPC4-210ENST00000531290 TNPO2O14787 897 aaKnown RBP27.11■■□□□ 1.93
TRAPPC4-210ENST00000531290 ANKRD13CQ8N6S4 541 aa27.11■■□□□ 1.93
TRAPPC4-210ENST00000531290 GINM1Q9NU53 330 aa27.11■■□□□ 1.93
TRAPPC4-210ENST00000531290 IFIT2P09913 472 aaKnown RBP27.1■■□□□ 1.93
TRAPPC4-210ENST00000531290 UBXN2AP68543 259 aa27.1■■□□□ 1.93
TRAPPC4-210ENST00000531290 TTF1Q15361 905 aaPredicted RBP27.1■■□□□ 1.93
TRAPPC4-210ENST00000531290 MTFR1Q15390 333 aa27.1■■□□□ 1.93
TRAPPC4-210ENST00000531290 SH3D19Q5HYK7 790 aa27.1■■□□□ 1.93
TRAPPC4-210ENST00000531290 BCL11AQ9H165 835 aa27.1■■□□□ 1.93
TRAPPC4-210ENST00000531290 TMOD4Q9NZQ9 345 aa27.1■■□□□ 1.93
TRAPPC4-210ENST00000531290 GABRQQ9UN88 632 aa27.1■■□□□ 1.93
TRAPPC4-210ENST00000531290 GCLCP48506 637 aaPredicted RBP27.09■■□□□ 1.93
TRAPPC4-210ENST00000531290 SLAIN1Q8ND83 568 aa27.09■■□□□ 1.93
TRAPPC4-210ENST00000531290 DNAJC18Q9H819 358 aa27.09■■□□□ 1.93
TRAPPC4-210ENST00000531290 RAB11FIP3O75154 756 aa27.08■■□□□ 1.93
TRAPPC4-210ENST00000531290 GDF11O95390 407 aa27.08■■□□□ 1.93
TRAPPC4-210ENST00000531290 FLT3LGP49771 235 aa27.08■■□□□ 1.93
TRAPPC4-210ENST00000531290 BACE1P56817 501 aa27.08■■□□□ 1.93
TRAPPC4-210ENST00000531290 MTMR2Q13614 643 aa27.08■■□□□ 1.93
TRAPPC4-210ENST00000531290 COA7Q96BR5 231 aa27.08■■□□□ 1.93
TRAPPC4-210ENST00000531290 JAG1P78504 1218 aa27.07■■□□□ 1.92
TRAPPC4-210ENST00000531290 FAM110CQ1W6H9 321 aa27.07■■□□□ 1.92
TRAPPC4-210ENST00000531290 SIRT2Q8IXJ6 389 aa27.07■■□□□ 1.92
TRAPPC4-210ENST00000531290 NKX2-3Q8TAU0 364 aa27.07■■□□□ 1.92
TRAPPC4-210ENST00000531290 ASCC2Q9H1I8 757 aaPredicted RBP27.07■■□□□ 1.92
TRAPPC4-210ENST00000531290 C19orf81C9J6K1 198 aa27.06■■□□□ 1.92
TRAPPC4-210ENST00000531290 ADCY3O60266 1144 aa27.06■■□□□ 1.92
TRAPPC4-210ENST00000531290 CCL5P13501 91 aa27.06■■□□□ 1.92
TRAPPC4-210ENST00000531290 TTC6Q86TZ1 520 aa27.06■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 137.7 ms