RNA–Protein interactions for RNA: ENST00000531104.1

SRPRA-205, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 542 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-205ENST00000531104 USP48Q86UV5 1035 aa12.77□□□□□ -0.37
SRPRA-205ENST00000531104 TEX11Q8IYF3 940 aa12.77□□□□□ -0.37
SRPRA-205ENST00000531104 ENAHQ8N8S7 591 aaPredicted RBP12.77□□□□□ -0.37
SRPRA-205ENST00000531104 GPT2Q8TD30 523 aa12.77□□□□□ -0.37
SRPRA-205ENST00000531104 ANKS1AQ92625 1134 aa12.77□□□□□ -0.37
SRPRA-205ENST00000531104 PSMD1Q99460 953 aa12.77□□□□□ -0.37
SRPRA-205ENST00000531104 ZKSCAN3Q9BRR0 538 aa12.77□□□□□ -0.37
SRPRA-205ENST00000531104 UBAC1Q9BSL1 405 aa12.77□□□□□ -0.37
SRPRA-205ENST00000531104 VPS33BQ9H267 617 aa12.77□□□□□ -0.37
SRPRA-205ENST00000531104 ZSCAN16Q9H4T2 348 aaPredicted RBP12.77□□□□□ -0.37
SRPRA-205ENST00000531104 DBNDD1Q9H9R9 158 aa12.77□□□□□ -0.37
SRPRA-205ENST00000531104 CNPY2Q9Y2B0 182 aa12.77□□□□□ -0.37
SRPRA-205ENST00000531104 SLC12A7Q9Y666 1083 aa12.77□□□□□ -0.37
SRPRA-205ENST00000531104 SCN9AQ15858 1988 aa12.77□□□□□ -0.37
SRPRA-205ENST00000531104 TNKSO95271 1327 aa12.77□□□□□ -0.37
SRPRA-205ENST00000531104 FLT1P17948 1338 aa12.77□□□□□ -0.37
SRPRA-205ENST00000531104 STK36Q9NRP7 1315 aa12.77□□□□□ -0.37
SRPRA-205ENST00000531104 ERICH2A1L162 156 aa12.76□□□□□ -0.37
SRPRA-205ENST00000531104 GOLGA8AA7E2F4 631 aa12.76□□□□□ -0.37
SRPRA-205ENST00000531104 CDKL5O76039 1030 aa12.76□□□□□ -0.37
SRPRA-205ENST00000531104 IFNAR1P17181 557 aa12.76□□□□□ -0.37
SRPRA-205ENST00000531104 DNM1Q05193 864 aaKnown RBP12.76□□□□□ -0.37
SRPRA-205ENST00000531104 PPP2R5BQ15173 497 aa12.76□□□□□ -0.37
SRPRA-205ENST00000531104 CCDC93Q567U6 631 aa12.76□□□□□ -0.37
SRPRA-205ENST00000531104 RAB11FIP4Q86YS3 637 aa12.76□□□□□ -0.37
SRPRA-205ENST00000531104 MAPKAPK5Q8IW41 473 aa12.76□□□□□ -0.37
SRPRA-205ENST00000531104 RTKN2Q8IZC4 609 aa12.76□□□□□ -0.37
SRPRA-205ENST00000531104 ZNF654Q8IZM8 581 aa12.76□□□□□ -0.37
SRPRA-205ENST00000531104 STK11IPQ8N1F8 1099 aa12.76□□□□□ -0.37
SRPRA-205ENST00000531104 MXD3Q9BW11 206 aa12.76□□□□□ -0.37
SRPRA-205ENST00000531104 MTFR1LQ9H019 292 aa12.76□□□□□ -0.37
SRPRA-205ENST00000531104 KCNQ5Q9NR82 932 aa12.76□□□□□ -0.37
SRPRA-205ENST00000531104 TOMM22Q9NS69 142 aa12.76□□□□□ -0.37
SRPRA-205ENST00000531104 TCP11L1Q9NUJ3 509 aa12.76□□□□□ -0.37
SRPRA-205ENST00000531104 ORC3Q9UBD5 711 aaPredicted RBP12.76□□□□□ -0.37
SRPRA-205ENST00000531104 TTF2Q9UNY4 1162 aaKnown RBP12.76□□□□□ -0.37
SRPRA-205ENST00000531104 DDX49Q9Y6V7 483 aaKnown RBP12.76□□□□□ -0.37
SRPRA-205ENST00000531104 USP17L3A6NCW0 530 aa12.75□□□□□ -0.37
SRPRA-205ENST00000531104 USP17L4A6NCW7 530 aa12.75□□□□□ -0.37
SRPRA-205ENST00000531104 G3V3G9 751 aa12.75□□□□□ -0.37
SRPRA-205ENST00000531104 CPLX1O14810 134 aa12.75□□□□□ -0.37
SRPRA-205ENST00000531104 C21orf2O43822 256 aa12.75□□□□□ -0.37
SRPRA-205ENST00000531104 RANBP6O60518 1105 aaKnown RBP12.75□□□□□ -0.37
SRPRA-205ENST00000531104 PRDM1O75626 825 aa12.75□□□□□ -0.37
SRPRA-205ENST00000531104 ELP1O95163 1332 aa12.75□□□□□ -0.37
SRPRA-205ENST00000531104 MBD3O95983 291 aa12.75□□□□□ -0.37
SRPRA-205ENST00000531104 PLCD1P51178 756 aa12.75□□□□□ -0.37
SRPRA-205ENST00000531104 AOC3Q16853 763 aa12.75□□□□□ -0.37
SRPRA-205ENST00000531104 DCAF8Q5TAQ9 597 aa12.75□□□□□ -0.37
SRPRA-205ENST00000531104 ECM29Q5VYK3 1845 aa12.75□□□□□ -0.37
SRPRA-205ENST00000531104 APOBEC3HQ6NTF7 200 aaKnown RBP12.75□□□□□ -0.37
SRPRA-205ENST00000531104 SYNE3Q6ZMZ3 975 aa12.75□□□□□ -0.37
SRPRA-205ENST00000531104 C16orf86Q6ZW13 317 aa12.75□□□□□ -0.37
SRPRA-205ENST00000531104 USP17L1Q7RTZ2 530 aa12.75□□□□□ -0.37
SRPRA-205ENST00000531104 NBPF11Q86T75 865 aa12.75□□□□□ -0.37
SRPRA-205ENST00000531104 MICU3Q86XE3 530 aa12.75□□□□□ -0.37
SRPRA-205ENST00000531104 IQCA1Q86XH1 822 aa12.75□□□□□ -0.37
SRPRA-205ENST00000531104 ADAMTSL1Q8N6G6 1762 aa12.75□□□□□ -0.37
SRPRA-205ENST00000531104 ZDHHC15Q96MV8 337 aa12.75□□□□□ -0.37
SRPRA-205ENST00000531104 SGIP1Q9BQI5 828 aa12.75□□□□□ -0.37
SRPRA-205ENST00000531104 MYL10Q9BUA6 226 aa12.75□□□□□ -0.37
SRPRA-205ENST00000531104 MYH15Q9Y2K3 1946 aa12.74□□□□□ -0.37
SRPRA-205ENST00000531104 YDJCA8MPS7 323 aa12.74□□□□□ -0.37
SRPRA-205ENST00000531104 H3BQV1 296 aa12.74□□□□□ -0.37
SRPRA-205ENST00000531104 WDHD1O75717 1129 aaPredicted RBP12.74□□□□□ -0.37
SRPRA-205ENST00000531104 DDAH1O94760 285 aa12.74□□□□□ -0.37
SRPRA-205ENST00000531104 FMNL1O95466 1100 aaPredicted RBP12.74□□□□□ -0.37
SRPRA-205ENST00000531104 RXRAP19793 462 aa12.74□□□□□ -0.37
SRPRA-205ENST00000531104 DEKP35659 375 aaKnown RBP12.74□□□□□ -0.37
SRPRA-205ENST00000531104 NOVP48745 357 aa12.74□□□□□ -0.37
SRPRA-205ENST00000531104 KRT85P78386 507 aa12.74□□□□□ -0.37
SRPRA-205ENST00000531104 TROAPQ12815 778 aa12.74□□□□□ -0.37
SRPRA-205ENST00000531104 RTN1Q16799 776 aa12.74□□□□□ -0.37
SRPRA-205ENST00000531104 CSPP1Q1MSJ5 1256 aa12.74□□□□□ -0.37
SRPRA-205ENST00000531104 IFFO2Q5TF58 517 aa12.74□□□□□ -0.37
SRPRA-205ENST00000531104 RCSD1Q6JBY9 416 aa12.74□□□□□ -0.37
SRPRA-205ENST00000531104 CPLX2Q6PUV4 134 aaKnown RBP12.74□□□□□ -0.37
SRPRA-205ENST00000531104 FERMT3Q86UX7 667 aa12.74□□□□□ -0.37
SRPRA-205ENST00000531104 AMOTL1Q8IY63 956 aa12.74□□□□□ -0.37
SRPRA-205ENST00000531104 FANCBQ8NB91 859 aa12.74□□□□□ -0.37
SRPRA-205ENST00000531104 FBXO18Q8NFZ0 1043 aa12.74□□□□□ -0.37
SRPRA-205ENST00000531104 TEKT1Q969V4 418 aa12.74□□□□□ -0.37
SRPRA-205ENST00000531104 DYNLL2Q96FJ2 89 aa12.74□□□□□ -0.37
SRPRA-205ENST00000531104 GDPD2Q9HCC8 539 aa12.74□□□□□ -0.37
SRPRA-205ENST00000531104 ZNF219Q9P2Y4 722 aaPredicted RBP12.74□□□□□ -0.37
SRPRA-205ENST00000531104 MYH1P12882 1939 aa12.74□□□□□ -0.37
SRPRA-205ENST00000531104 TCHHQ07283 1943 aa12.74□□□□□ -0.37
SRPRA-205ENST00000531104 BRCA1P38398 1863 aaKnown RBP12.74□□□□□ -0.37
SRPRA-205ENST00000531104 CCDC196A0A1B0GTZ2 297 aa12.73□□□□□ -0.37
SRPRA-205ENST00000531104 FSD2A1L4K1 749 aa12.73□□□□□ -0.37
SRPRA-205ENST00000531104 GADD45BO75293 160 aaPredicted RBP12.73□□□□□ -0.37
SRPRA-205ENST00000531104 ZBTB7AO95365 584 aa12.73□□□□□ -0.37
SRPRA-205ENST00000531104 POLR3DP05423 398 aaPredicted RBP12.73□□□□□ -0.37
SRPRA-205ENST00000531104 CALM1P0DP23 149 aa12.73□□□□□ -0.37
SRPRA-205ENST00000531104 CALM2P0DP24 149 aa12.73□□□□□ -0.37
SRPRA-205ENST00000531104 CALM3P0DP25 149 aa12.73□□□□□ -0.37
SRPRA-205ENST00000531104 RASA1P20936 1047 aa12.73□□□□□ -0.37
SRPRA-205ENST00000531104 IARSP41252 1262 aaKnown RBP12.73□□□□□ -0.37
SRPRA-205ENST00000531104 CRKP46108 304 aa12.73□□□□□ -0.37
SRPRA-205ENST00000531104 GABPAQ06546 454 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms