RNA–Protein interactions for RNA: ENST00000530563.1

TM9SF1-210, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 3

Gene TM9SF1, Length 721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-210ENST00000530563 ATP2B3Q16720 1220 aa13.33□□□□□ -0.28
TM9SF1-210ENST00000530563 TRIB2Q92519 343 aa13.33□□□□□ -0.28
TM9SF1-210ENST00000530563 DENND2AQ9ULE3 1009 aa13.33□□□□□ -0.28
TM9SF1-210ENST00000530563 TTC28Q96AY4 2481 aa13.33□□□□□ -0.28
TM9SF1-210ENST00000530563 SPP2Q13103 211 aa13.32□□□□□ -0.28
TM9SF1-210ENST00000530563 ZSCAN29Q8IWY8 852 aaPredicted RBP13.32□□□□□ -0.28
TM9SF1-210ENST00000530563 UBE2OQ9C0C9 1292 aaKnown RBP13.32□□□□□ -0.28
TM9SF1-210ENST00000530563 ASCC2Q9H1I8 757 aaPredicted RBP13.32□□□□□ -0.28
TM9SF1-210ENST00000530563 MORF4L1Q9UBU8 362 aa13.32□□□□□ -0.28
TM9SF1-210ENST00000530563 PNMA3Q9UL41 463 aa13.32□□□□□ -0.28
TM9SF1-210ENST00000530563 LOC285556D6RIA3 1793 aa13.32□□□□□ -0.28
TM9SF1-210ENST00000530563 MYH2Q9UKX2 1941 aa13.31□□□□□ -0.28
TM9SF1-210ENST00000530563 COL2A1P02458 1487 aaPredicted RBP13.31□□□□□ -0.28
TM9SF1-210ENST00000530563 GPR75-ASB3A0A0A6YYF3 556 aa13.31□□□□□ -0.28
TM9SF1-210ENST00000530563 FAM196BA6NMK8 535 aa13.31□□□□□ -0.28
TM9SF1-210ENST00000530563 NPM3O75607 178 aaKnown RBP13.31□□□□□ -0.28
TM9SF1-210ENST00000530563 CIAO1O76071 339 aa13.31□□□□□ -0.28
TM9SF1-210ENST00000530563 ADORA1P30542 326 aa13.31□□□□□ -0.28
TM9SF1-210ENST00000530563 SH3D19Q5HYK7 790 aa13.31□□□□□ -0.28
TM9SF1-210ENST00000530563 LHX8Q68G74 356 aa13.31□□□□□ -0.28
TM9SF1-210ENST00000530563 FAM109BQ6ICB4 259 aaPredicted RBP13.31□□□□□ -0.28
TM9SF1-210ENST00000530563 USP6NLQ92738 828 aa13.31□□□□□ -0.28
TM9SF1-210ENST00000530563 GUCD1Q96NT3 240 aa13.31□□□□□ -0.28
TM9SF1-210ENST00000530563 GNL3LQ9NVN8 582 aaKnown RBP13.31□□□□□ -0.28
TM9SF1-210ENST00000530563 FBXO3Q9UK99 471 aa13.31□□□□□ -0.28
TM9SF1-210ENST00000530563 PEX10O60683 326 aa13.3□□□□□ -0.28
TM9SF1-210ENST00000530563 BTDP43251 543 aa13.3□□□□□ -0.28
TM9SF1-210ENST00000530563 HMGCS2P54868 508 aa13.3□□□□□ -0.28
TM9SF1-210ENST00000530563 PICALMQ13492 652 aa13.3□□□□□ -0.28
TM9SF1-210ENST00000530563 RASGRF1Q13972 1273 aa13.3□□□□□ -0.28
TM9SF1-210ENST00000530563 LRRC26Q2I0M4 334 aa13.3□□□□□ -0.28
TM9SF1-210ENST00000530563 CCDC102BQ68D86 513 aa13.3□□□□□ -0.28
TM9SF1-210ENST00000530563 POTEEQ6S8J3 1075 aa13.3□□□□□ -0.28
TM9SF1-210ENST00000530563 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.3□□□□□ -0.28
TM9SF1-210ENST00000530563 ZNF280CQ8ND82 737 aa13.3□□□□□ -0.28
TM9SF1-210ENST00000530563 OSBPL5Q9H0X9 879 aaPredicted RBP13.3□□□□□ -0.28
TM9SF1-210ENST00000530563 SIL1Q9H173 461 aa13.3□□□□□ -0.28
TM9SF1-210ENST00000530563 CEP126Q9P2H0 1117 aa13.3□□□□□ -0.28
TM9SF1-210ENST00000530563 PTPRCP08575 1304 aa13.3□□□□□ -0.28
TM9SF1-210ENST00000530563 PDS5AQ29RF7 1337 aaKnown RBP13.3□□□□□ -0.28
TM9SF1-210ENST00000530563 ZNF521Q96K83 1311 aa13.3□□□□□ -0.28
TM9SF1-210ENST00000530563 XRCC5P13010 732 aaKnown RBP13.29□□□□□ -0.28
TM9SF1-210ENST00000530563 PRKAR2AP13861 404 aaKnown RBP13.29□□□□□ -0.28
TM9SF1-210ENST00000530563 JAG1P78504 1218 aa13.29□□□□□ -0.28
TM9SF1-210ENST00000530563 CACNB2Q08289 660 aaPredicted RBP13.29□□□□□ -0.28
TM9SF1-210ENST00000530563 TXNRD2Q9NNW7 524 aa13.29□□□□□ -0.28
TM9SF1-210ENST00000530563 MROH7-TTC4A0A0A0MT08 1334 aa13.29□□□□□ -0.28
TM9SF1-210ENST00000530563 CYP2B6P20813 491 aa13.28□□□□□ -0.28
TM9SF1-210ENST00000530563 CAP2P40123 477 aa13.28□□□□□ -0.28
TM9SF1-210ENST00000530563 TIMM10P62072 90 aa13.28□□□□□ -0.28
TM9SF1-210ENST00000530563 MECOMQ03112 1051 aa13.28□□□□□ -0.28
TM9SF1-210ENST00000530563 ZGPATQ8N5A5 531 aaKnown RBP13.28□□□□□ -0.28
TM9SF1-210ENST00000530563 SSH1Q8WYL5 1049 aa13.28□□□□□ -0.28
TM9SF1-210ENST00000530563 P2RX7Q99572 595 aaKnown RBP13.28□□□□□ -0.28
TM9SF1-210ENST00000530563 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.28□□□□□ -0.28
TM9SF1-210ENST00000530563 MRS2Q9HD23 443 aa13.28□□□□□ -0.28
TM9SF1-210ENST00000530563 USP17L5A8MUK1 530 aa13.27□□□□□ -0.29
TM9SF1-210ENST00000530563 HOXA7P31268 230 aaPredicted RBP13.27□□□□□ -0.29
TM9SF1-210ENST00000530563 IL15P40933 162 aaPredicted RBP13.27□□□□□ -0.29
TM9SF1-210ENST00000530563 PABPC4Q13310 644 aaKnown RBP eCLIP13.27□□□□□ -0.29
TM9SF1-210ENST00000530563 Q3C1V9 767 aa13.27□□□□□ -0.29
TM9SF1-210ENST00000530563 DZIP1Q86YF9 867 aaKnown RBP13.27□□□□□ -0.29
TM9SF1-210ENST00000530563 WDR18Q9BV38 432 aa13.27□□□□□ -0.29
TM9SF1-210ENST00000530563 TBC1D2Q9BYX2 928 aa13.27□□□□□ -0.29
TM9SF1-210ENST00000530563 RBPJLQ9UBG7 517 aa13.27□□□□□ -0.29
TM9SF1-210ENST00000530563 ABCF2Q9UG63 623 aa13.27□□□□□ -0.29
TM9SF1-210ENST00000530563 PA2G4Q9UQ80 394 aaKnown RBP13.27□□□□□ -0.29
TM9SF1-210ENST00000530563 CCND3P30281 292 aaPredicted RBP13.26□□□□□ -0.29
TM9SF1-210ENST00000530563 MDM2Q00987 491 aaPredicted RBP13.26□□□□□ -0.29
TM9SF1-210ENST00000530563 CCL14Q16627 93 aa13.26□□□□□ -0.29
TM9SF1-210ENST00000530563 MORN1Q5T089 497 aa13.26□□□□□ -0.29
TM9SF1-210ENST00000530563 SLF2Q8IX21 1173 aa13.26□□□□□ -0.29
TM9SF1-210ENST00000530563 NUDT12Q9BQG2 462 aa13.26□□□□□ -0.29
TM9SF1-210ENST00000530563 COPRSQ9NQ92 184 aa13.26□□□□□ -0.29
TM9SF1-210ENST00000530563 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.26□□□□□ -0.29
TM9SF1-210ENST00000530563 MAP4K4O95819 1239 aaPredicted RBP13.25□□□□□ -0.29
TM9SF1-210ENST00000530563 BACE1P56817 501 aa13.25□□□□□ -0.29
TM9SF1-210ENST00000530563 HERVK_113P62684 666 aa13.25□□□□□ -0.29
TM9SF1-210ENST00000530563 SPTY2D1Q68D10 685 aaPredicted RBP13.25□□□□□ -0.29
TM9SF1-210ENST00000530563 GPRC5AQ8NFJ5 357 aa13.25□□□□□ -0.29
TM9SF1-210ENST00000530563 NSUN4Q96CB9 384 aaKnown RBP13.25□□□□□ -0.29
TM9SF1-210ENST00000530563 PORCNQ9H237 461 aa13.25□□□□□ -0.29
TM9SF1-210ENST00000530563 CHD9Q3L8U1 2897 aa13.25□□□□□ -0.29
TM9SF1-210ENST00000530563 MTMR2Q13614 643 aa13.24□□□□□ -0.29
TM9SF1-210ENST00000530563 SHROOM1Q2M3G4 852 aaPredicted RBP13.24□□□□□ -0.29
TM9SF1-210ENST00000530563 METTL16Q86W50 562 aaKnown RBP13.24□□□□□ -0.29
TM9SF1-210ENST00000530563 TRMT44Q8IYL2 757 aaKnown RBP13.24□□□□□ -0.29
TM9SF1-210ENST00000530563 SOCS4Q8WXH5 440 aa13.24□□□□□ -0.29
TM9SF1-210ENST00000530563 DNAJC18Q9H819 358 aa13.24□□□□□ -0.29
TM9SF1-210ENST00000530563 HMG20BQ9P0W2 317 aa13.24□□□□□ -0.29
TM9SF1-210ENST00000530563 ATAD5Q96QE3 1844 aa13.24□□□□□ -0.29
TM9SF1-210ENST00000530563 SIPA1L1O43166 1804 aa13.23□□□□□ -0.29
TM9SF1-210ENST00000530563 IGHA2P01877 340 aa13.23□□□□□ -0.29
TM9SF1-210ENST00000530563 ZKSCAN1P17029 563 aaPredicted RBP13.23□□□□□ -0.29
TM9SF1-210ENST00000530563 MAPK4P31152 587 aa13.23□□□□□ -0.29
TM9SF1-210ENST00000530563 PI16Q6UXB8 463 aa13.23□□□□□ -0.29
TM9SF1-210ENST00000530563 TBC1D9Q6ZT07 1266 aa13.23□□□□□ -0.29
TM9SF1-210ENST00000530563 ERICH6Q7L0X2 663 aa13.23□□□□□ -0.29
TM9SF1-210ENST00000530563 GPR142Q7Z601 462 aa13.23□□□□□ -0.29
TM9SF1-210ENST00000530563 XAGE2Q96GT9 111 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms