RNA–Protein interactions for RNA: ENST00000530442.5

CAPN1-218, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-218ENST00000530442 EHD4Q9H223 541 aa13.15□□□□□ -0.3
CAPN1-218ENST00000530442 PI4KBQ9UBF8 816 aa13.15□□□□□ -0.3
CAPN1-218ENST00000530442 ARPP21Q9UBL0 812 aaPredicted RBP13.15□□□□□ -0.3
CAPN1-218ENST00000530442 ROBO3Q96MS0 1386 aa13.15□□□□□ -0.3
CAPN1-218ENST00000530442 GREB1LQ9C091 1923 aaPredicted RBP13.15□□□□□ -0.3
CAPN1-218ENST00000530442 CYP2D7A0A087X1C5 515 aa13.14□□□□□ -0.31
CAPN1-218ENST00000530442 RASSF10A6NK89 507 aa13.14□□□□□ -0.31
CAPN1-218ENST00000530442 UBE2Q2LH0YL09 131 aa13.14□□□□□ -0.31
CAPN1-218ENST00000530442 TBC1D12O60347 775 aa13.14□□□□□ -0.31
CAPN1-218ENST00000530442 HSPD1P10809 573 aaKnown RBP13.14□□□□□ -0.31
CAPN1-218ENST00000530442 IREB2P48200 963 aaKnown RBP13.14□□□□□ -0.31
CAPN1-218ENST00000530442 TDO2P48775 406 aa13.14□□□□□ -0.31
CAPN1-218ENST00000530442 LDLRAD1Q5T700 205 aa13.14□□□□□ -0.31
CAPN1-218ENST00000530442 GIMAP6Q6P9H5 292 aa13.14□□□□□ -0.31
CAPN1-218ENST00000530442 CTR9Q6PD62 1173 aa13.14□□□□□ -0.31
CAPN1-218ENST00000530442 METTL16Q86W50 562 aaKnown RBP13.14□□□□□ -0.31
CAPN1-218ENST00000530442 IFNL3Q8IZI9 196 aa13.14□□□□□ -0.31
CAPN1-218ENST00000530442 WRNIP1Q96S55 665 aa13.14□□□□□ -0.31
CAPN1-218ENST00000530442 HERC5Q9UII4 1024 aaKnown RBP13.14□□□□□ -0.31
CAPN1-218ENST00000530442 ZMYM6O95789 1325 aa13.13□□□□□ -0.31
CAPN1-218ENST00000530442 PTPRFP10586 1907 aa13.13□□□□□ -0.31
CAPN1-218ENST00000530442 PHF20L1A8MW92 1017 aa13.13□□□□□ -0.31
CAPN1-218ENST00000530442 USP17L12C9JPN9 530 aa13.13□□□□□ -0.31
CAPN1-218ENST00000530442 USP17L21D6R901 530 aa13.13□□□□□ -0.31
CAPN1-218ENST00000530442 SGSM2O43147 1006 aa13.13□□□□□ -0.31
CAPN1-218ENST00000530442 CDC45O75419 566 aa13.13□□□□□ -0.31
CAPN1-218ENST00000530442 APPP05067 770 aa13.13□□□□□ -0.31
CAPN1-218ENST00000530442 POLR3DP05423 398 aaPredicted RBP13.13□□□□□ -0.31
CAPN1-218ENST00000530442 INPP5BP32019 993 aa13.13□□□□□ -0.31
CAPN1-218ENST00000530442 GABPAQ06546 454 aa13.13□□□□□ -0.31
CAPN1-218ENST00000530442 VGLL4Q14135 290 aa13.13□□□□□ -0.31
CAPN1-218ENST00000530442 C12orf60Q5U649 245 aa13.13□□□□□ -0.31
CAPN1-218ENST00000530442 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.13□□□□□ -0.31
CAPN1-218ENST00000530442 TTC6Q86TZ1 520 aa13.13□□□□□ -0.31
CAPN1-218ENST00000530442 DDRGK1Q96HY6 314 aa13.13□□□□□ -0.31
CAPN1-218ENST00000530442 CLMNQ96JQ2 1002 aa13.13□□□□□ -0.31
CAPN1-218ENST00000530442 NAPBQ9H115 298 aa13.13□□□□□ -0.31
CAPN1-218ENST00000530442 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.13□□□□□ -0.31
CAPN1-218ENST00000530442 SERPINB13Q9UIV8 391 aa13.13□□□□□ -0.31
CAPN1-218ENST00000530442 ZNF112Q9UJU3 913 aa13.13□□□□□ -0.31
CAPN1-218ENST00000530442 PCNTO95613 3336 aa13.13□□□□□ -0.31
CAPN1-218ENST00000530442 MFAP1P55081 439 aaKnown RBP13.12□□□□□ -0.31
CAPN1-218ENST00000530442 RRP1BQ14684 758 aaKnown RBP13.12□□□□□ -0.31
CAPN1-218ENST00000530442 SBK1Q52WX2 424 aa13.12□□□□□ -0.31
CAPN1-218ENST00000530442 RASAL3Q86YV0 1011 aa13.12□□□□□ -0.31
CAPN1-218ENST00000530442 ANKRD13AQ8IZ07 590 aa13.12□□□□□ -0.31
CAPN1-218ENST00000530442 CRACR2BQ8N4Y2 399 aaPredicted RBP13.12□□□□□ -0.31
CAPN1-218ENST00000530442 SLC44A5Q8NCS7 719 aa13.12□□□□□ -0.31
CAPN1-218ENST00000530442 RUFY2Q8WXA3 655 aa13.12□□□□□ -0.31
CAPN1-218ENST00000530442 ZKSCAN4Q969J2 545 aaPredicted RBP13.12□□□□□ -0.31
CAPN1-218ENST00000530442 HHIPL1Q96JK4 782 aa13.12□□□□□ -0.31
CAPN1-218ENST00000530442 NACAP1Q9BZK3 213 aa13.12□□□□□ -0.31
CAPN1-218ENST00000530442 SNCAIPQ9Y6H5 919 aa13.12□□□□□ -0.31
CAPN1-218ENST00000530442 SHMT1P34896 483 aa13.11□□□□□ -0.31
CAPN1-218ENST00000530442 MAP3K9P80192 1104 aa13.11□□□□□ -0.31
CAPN1-218ENST00000530442 SHROOM1Q2M3G4 852 aaPredicted RBP13.11□□□□□ -0.31
CAPN1-218ENST00000530442 NOL9Q5SY16 702 aaKnown RBP13.11□□□□□ -0.31
CAPN1-218ENST00000530442 CYP4F22Q6NT55 531 aa13.11□□□□□ -0.31
CAPN1-218ENST00000530442 RGMBQ6NW40 437 aa13.11□□□□□ -0.31
CAPN1-218ENST00000530442 FOXP4Q8IVH2 680 aaPredicted RBP13.11□□□□□ -0.31
CAPN1-218ENST00000530442 AMOTL1Q8IY63 956 aa13.11□□□□□ -0.31
CAPN1-218ENST00000530442 DYNLL2Q96FJ2 89 aa13.11□□□□□ -0.31
CAPN1-218ENST00000530442 ESYT1Q9BSJ8 1104 aa13.11□□□□□ -0.31
CAPN1-218ENST00000530442 DSCC1Q9BVC3 393 aa13.11□□□□□ -0.31
CAPN1-218ENST00000530442 TRIM34Q9BYJ4 488 aa13.11□□□□□ -0.31
CAPN1-218ENST00000530442 UNCXA6NJT0 531 aa13.1□□□□□ -0.31
CAPN1-218ENST00000530442 MINDY4BA8MYZ0 360 aa13.1□□□□□ -0.31
CAPN1-218ENST00000530442 FAM155AB1AL88 458 aaPredicted RBP13.1□□□□□ -0.31
CAPN1-218ENST00000530442 SLC10A3P09131 477 aa13.1□□□□□ -0.31
CAPN1-218ENST00000530442 PPARAQ07869 468 aa13.1□□□□□ -0.31
CAPN1-218ENST00000530442 ALX1Q15699 326 aa13.1□□□□□ -0.31
CAPN1-218ENST00000530442 DEFB115Q30KQ5 88 aa13.1□□□□□ -0.31
CAPN1-218ENST00000530442 TATDN1Q6P1N9 297 aa13.1□□□□□ -0.31
CAPN1-218ENST00000530442 C16orf86Q6ZW13 317 aa13.1□□□□□ -0.31
CAPN1-218ENST00000530442 SCYL3Q8IZE3 742 aa13.1□□□□□ -0.31
CAPN1-218ENST00000530442 ELP3Q9H9T3 547 aa13.1□□□□□ -0.31
CAPN1-218ENST00000530442 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.1□□□□□ -0.31
CAPN1-218ENST00000530442 CSADQ9Y600 493 aa13.1□□□□□ -0.31
CAPN1-218ENST00000530442 LOC285556D6RIA3 1793 aa13.09□□□□□ -0.31
CAPN1-218ENST00000530442 GDF11O95390 407 aa13.09□□□□□ -0.31
CAPN1-218ENST00000530442 FGAP02671 866 aa13.09□□□□□ -0.31
CAPN1-218ENST00000530442 GJA5P36382 358 aa13.09□□□□□ -0.31
CAPN1-218ENST00000530442 ZNF157P51786 506 aaPredicted RBP13.09□□□□□ -0.31
CAPN1-218ENST00000530442 JAG1P78504 1218 aa13.09□□□□□ -0.31
CAPN1-218ENST00000530442 PTH1RQ03431 593 aa13.09□□□□□ -0.31
CAPN1-218ENST00000530442 PAXIP1Q6ZW49 1069 aaPredicted RBP13.09□□□□□ -0.31
CAPN1-218ENST00000530442 CNKSR2Q8WXI2 1034 aa13.09□□□□□ -0.31
CAPN1-218ENST00000530442 SWAP70Q9UH65 585 aa13.09□□□□□ -0.31
CAPN1-218ENST00000530442 SPDYE5A6NIY4 337 aa13.08□□□□□ -0.32
CAPN1-218ENST00000530442 CTNND1O60716 968 aaKnown RBP13.08□□□□□ -0.32
CAPN1-218ENST00000530442 CAP2P40123 477 aa13.08□□□□□ -0.32
CAPN1-218ENST00000530442 CDK8P49336 464 aa13.08□□□□□ -0.32
CAPN1-218ENST00000530442 CASC1Q6TDU7 716 aa13.08□□□□□ -0.32
CAPN1-218ENST00000530442 STK11IPQ8N1F8 1099 aa13.08□□□□□ -0.32
CAPN1-218ENST00000530442 OPTNQ96CV9 577 aa13.08□□□□□ -0.32
CAPN1-218ENST00000530442 WNK4Q96J92 1243 aa13.08□□□□□ -0.32
CAPN1-218ENST00000530442 CAPNS2Q96L46 248 aa13.08□□□□□ -0.32
CAPN1-218ENST00000530442 LSG1Q9H089 658 aaKnown RBP13.08□□□□□ -0.32
CAPN1-218ENST00000530442 NBPF3Q9H094 633 aa13.08□□□□□ -0.32
CAPN1-218ENST00000530442 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms