RNA–Protein interactions for RNA: ENST00000530339.1

PCDHA4-203, Transcript of protocadherin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA4, Length 5,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-203ENST00000530339 ZBTB16Q05516 673 aa17.27■□□□□ 0.35
PCDHA4-203ENST00000530339 CALCOCO2Q13137 446 aa17.27■□□□□ 0.35
PCDHA4-203ENST00000530339 ZC3H12CQ9C0D7 883 aaKnown RBP17.27■□□□□ 0.35
PCDHA4-203ENST00000530339 PLIN2Q99541 437 aa17.27■□□□□ 0.35
PCDHA4-203ENST00000530339 ZSWIM6Q9HCJ5 1215 aa17.27■□□□□ 0.35
PCDHA4-203ENST00000530339 MAST3O60307 1309 aa17.26■□□□□ 0.35
PCDHA4-203ENST00000530339 ATP5JP18859 108 aa17.26■□□□□ 0.35
PCDHA4-203ENST00000530339 SETDB1Q15047 1291 aa17.26■□□□□ 0.35
PCDHA4-203ENST00000530339 SSH3Q8TE77 659 aa17.26■□□□□ 0.35
PCDHA4-203ENST00000530339 RPGRIP1Q96KN7 1286 aa17.26■□□□□ 0.35
PCDHA4-203ENST00000530339 LACTBP83111 547 aaPredicted RBP17.26■□□□□ 0.35
PCDHA4-203ENST00000530339 ZKSCAN3Q9BRR0 538 aa17.26■□□□□ 0.35
PCDHA4-203ENST00000530339 MROH5Q6ZUA9 1318 aa17.26■□□□□ 0.35
PCDHA4-203ENST00000530339 LMTK3Q96Q04 1460 aa17.26■□□□□ 0.35
PCDHA4-203ENST00000530339 CLUL1Q15846 466 aa17.26■□□□□ 0.35
PCDHA4-203ENST00000530339 CSGALNACT2Q8N6G5 542 aa17.26■□□□□ 0.35
PCDHA4-203ENST00000530339 STK32BQ9NY57 414 aa17.26■□□□□ 0.35
PCDHA4-203ENST00000530339 MTUS1Q9ULD2 1270 aa17.26■□□□□ 0.35
PCDHA4-203ENST00000530339 PYCARDQ9ULZ3 195 aa17.26■□□□□ 0.35
PCDHA4-203ENST00000530339 FAM135BQ49AJ0 1406 aa17.26■□□□□ 0.35
PCDHA4-203ENST00000530339 TNNI2P48788 182 aa17.26■□□□□ 0.35
PCDHA4-203ENST00000530339 MXRA7P84157 204 aa17.26■□□□□ 0.35
PCDHA4-203ENST00000530339 MYSM1Q5VVJ2 828 aa17.26■□□□□ 0.35
PCDHA4-203ENST00000530339 KLHDC4Q8TBB5 520 aa17.26■□□□□ 0.35
PCDHA4-203ENST00000530339 CCDC51Q96ER9 411 aa17.26■□□□□ 0.35
PCDHA4-203ENST00000530339 KCNA6P17658 529 aa17.25■□□□□ 0.35
PCDHA4-203ENST00000530339 TRMT1LQ7Z2T5 733 aaKnown RBP17.25■□□□□ 0.35
PCDHA4-203ENST00000530339 LPIN2Q92539 896 aa17.25■□□□□ 0.35
PCDHA4-203ENST00000530339 ERBB4Q15303 1308 aa17.25■□□□□ 0.35
PCDHA4-203ENST00000530339 PDE4DQ08499 809 aa17.25■□□□□ 0.35
PCDHA4-203ENST00000530339 SPATA24Q86W54 205 aa17.25■□□□□ 0.35
PCDHA4-203ENST00000530339 XAGE2Q96GT9 111 aa17.25■□□□□ 0.35
PCDHA4-203ENST00000530339 SWAP70Q9UH65 585 aa17.25■□□□□ 0.35
PCDHA4-203ENST00000530339 MRVI1Q9Y6F6 885 aa17.25■□□□□ 0.35
PCDHA4-203ENST00000530339 DMTNQ08495 405 aa17.25■□□□□ 0.35
PCDHA4-203ENST00000530339 GCKRQ14397 625 aa17.25■□□□□ 0.35
PCDHA4-203ENST00000530339 HAUS3Q68CZ6 603 aa17.25■□□□□ 0.35
PCDHA4-203ENST00000530339 NOX5Q96PH1 765 aa17.25■□□□□ 0.35
PCDHA4-203ENST00000530339 AATKQ6ZMQ8 1374 aa17.25■□□□□ 0.35
PCDHA4-203ENST00000530339 GPAA1O43292 621 aa17.25■□□□□ 0.35
PCDHA4-203ENST00000530339 ITGA6P23229 1130 aa17.25■□□□□ 0.35
PCDHA4-203ENST00000530339 RUFY4Q6ZNE9 571 aa17.25■□□□□ 0.35
PCDHA4-203ENST00000530339 CROCCP2Q86T23 111 aa17.25■□□□□ 0.35
PCDHA4-203ENST00000530339 RBM17Q96I25 401 aaKnown RBP17.25■□□□□ 0.35
PCDHA4-203ENST00000530339 WWC3Q9ULE0 1092 aa17.25■□□□□ 0.35
PCDHA4-203ENST00000530339 TRAF5O00463 557 aa17.24■□□□□ 0.35
PCDHA4-203ENST00000530339 UTP14CQ5TAP6 766 aaKnown RBP17.24■□□□□ 0.35
PCDHA4-203ENST00000530339 SMC6Q96SB8 1091 aa17.24■□□□□ 0.35
PCDHA4-203ENST00000530339 SYNCQ9H7C4 482 aa17.24■□□□□ 0.35
PCDHA4-203ENST00000530339 MAP3K9P80192 1104 aa17.24■□□□□ 0.35
PCDHA4-203ENST00000530339 NAA25Q14CX7 972 aa17.24■□□□□ 0.35
PCDHA4-203ENST00000530339 KIAA1524Q8TCG1 905 aa17.24■□□□□ 0.35
PCDHA4-203ENST00000530339 IFT74Q96LB3 600 aa17.24■□□□□ 0.35
PCDHA4-203ENST00000530339 KCNK9Q9NPC2 374 aa17.24■□□□□ 0.35
PCDHA4-203ENST00000530339 PSDA5PKW4 1024 aaPredicted RBP17.24■□□□□ 0.35
PCDHA4-203ENST00000530339 RAPGEF1Q13905 1077 aa17.24■□□□□ 0.35
PCDHA4-203ENST00000530339 WHAMMP3Q1A5X7 153 aa17.24■□□□□ 0.35
PCDHA4-203ENST00000530339 SUCLG2Q96I99 432 aa17.24■□□□□ 0.35
PCDHA4-203ENST00000530339 FERP16591 822 aa17.24■□□□□ 0.35
PCDHA4-203ENST00000530339 GSTA5Q7RTV2 222 aa17.24■□□□□ 0.35
PCDHA4-203ENST00000530339 HELBQ8NG08 1087 aaPredicted RBP17.24■□□□□ 0.35
PCDHA4-203ENST00000530339 USP28Q96RU2 1077 aa17.24■□□□□ 0.35
PCDHA4-203ENST00000530339 SLF1Q9BQI6 1058 aa17.24■□□□□ 0.35
PCDHA4-203ENST00000530339 MYOM2P54296 1465 aa17.23■□□□□ 0.35
PCDHA4-203ENST00000530339 CD2BP2O95400 341 aaKnown RBP17.23■□□□□ 0.35
PCDHA4-203ENST00000530339 CCDC25Q86WR0 208 aa17.23■□□□□ 0.35
PCDHA4-203ENST00000530339 CHAMP1Q96JM3 812 aa17.23■□□□□ 0.35
PCDHA4-203ENST00000530339 TAB2Q9NYJ8 693 aa17.23■□□□□ 0.35
PCDHA4-203ENST00000530339 TPCN1Q9ULQ1 816 aa17.23■□□□□ 0.35
PCDHA4-203ENST00000530339 TDRD7Q8NHU6 1098 aaKnown RBP17.23■□□□□ 0.35
PCDHA4-203ENST00000530339 VTI1AQ96AJ9 217 aa17.23■□□□□ 0.35
PCDHA4-203ENST00000530339 MAPK8IP1Q9UQF2 711 aa17.23■□□□□ 0.35
PCDHA4-203ENST00000530339 ATP6V0A2Q9Y487 856 aa17.23■□□□□ 0.35
PCDHA4-203ENST00000530339 KDRP35968 1356 aa17.23■□□□□ 0.35
PCDHA4-203ENST00000530339 TMEM110-MUSTN1A8MSY1 372 aa17.23■□□□□ 0.35
PCDHA4-203ENST00000530339 PAK2Q13177 524 aa17.23■□□□□ 0.35
PCDHA4-203ENST00000530339 KRT25Q7Z3Z0 450 aa17.23■□□□□ 0.35
PCDHA4-203ENST00000530339 WDR66Q8TBY9 1149 aa17.23■□□□□ 0.35
PCDHA4-203ENST00000530339 VIMP08670 466 aaKnown RBP17.23■□□□□ 0.35
PCDHA4-203ENST00000530339 EPB41P11171 864 aaKnown RBP17.23■□□□□ 0.35
PCDHA4-203ENST00000530339 TTC38Q5R3I4 469 aa17.23■□□□□ 0.35
PCDHA4-203ENST00000530339 SND1Q7KZF4 910 aaKnown RBP eCLIP17.23■□□□□ 0.35
PCDHA4-203ENST00000530339 ZNF274Q96GC6 653 aaPredicted RBP17.23■□□□□ 0.35
PCDHA4-203ENST00000530339 STIM2Q9P246 746 aa17.23■□□□□ 0.35
PCDHA4-203ENST00000530339 PFKFB1P16118 471 aa17.22■□□□□ 0.35
PCDHA4-203ENST00000530339 EIF4A1P60842 406 aaKnown RBP17.22■□□□□ 0.35
PCDHA4-203ENST00000530339 PTH1RQ03431 593 aa17.22■□□□□ 0.35
PCDHA4-203ENST00000530339 PPP1R7Q15435 360 aa17.22■□□□□ 0.35
PCDHA4-203ENST00000530339 FCHSD1Q86WN1 690 aa17.22■□□□□ 0.35
PCDHA4-203ENST00000530339 CCDC50Q8IVM0 306 aa17.22■□□□□ 0.35
PCDHA4-203ENST00000530339 PLCD3Q8N3E9 789 aa17.22■□□□□ 0.35
PCDHA4-203ENST00000530339 CEP83Q9Y592 693 aa17.22■□□□□ 0.35
PCDHA4-203ENST00000530339 ADKP55263 362 aaKnown RBP17.22■□□□□ 0.35
PCDHA4-203ENST00000530339 E7EWF7 191 aa17.22■□□□□ 0.35
PCDHA4-203ENST00000530339 ATP5DP30049 168 aa17.22■□□□□ 0.35
PCDHA4-203ENST00000530339 MAGEA1P43355 309 aa17.22■□□□□ 0.35
PCDHA4-203ENST00000530339 PICALMQ13492 652 aa17.22■□□□□ 0.35
PCDHA4-203ENST00000530339 TRMT44Q8IYL2 757 aaKnown RBP17.22■□□□□ 0.35
PCDHA4-203ENST00000530339 RGS22Q8NE09 1264 aa17.22■□□□□ 0.35
PCDHA4-203ENST00000530339 ACSBG1Q96GR2 724 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms