RNA–Protein interactions for RNA: ENST00000530036.1

RPUSD4-204, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 3

Gene RPUSD4, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-204ENST00000530036 PHF20L1A8MW92 1017 aa6.8□□□□□ -1.32
RPUSD4-204ENST00000530036 FAM155AB1AL88 458 aaPredicted RBP6.8□□□□□ -1.32
RPUSD4-204ENST00000530036 HIP1O00291 1037 aa6.8□□□□□ -1.32
RPUSD4-204ENST00000530036 PRKAB2O43741 272 aa6.8□□□□□ -1.32
RPUSD4-204ENST00000530036 SLC10A3P09131 477 aa6.8□□□□□ -1.32
RPUSD4-204ENST00000530036 SLURP2P0DP57 97 aa6.8□□□□□ -1.32
RPUSD4-204ENST00000530036 GNAT2P19087 354 aa6.8□□□□□ -1.32
RPUSD4-204ENST00000530036 GABPAQ06546 454 aa6.8□□□□□ -1.32
RPUSD4-204ENST00000530036 PRKG1Q13976 671 aa6.8□□□□□ -1.32
RPUSD4-204ENST00000530036 TTLL12Q14166 644 aaPredicted RBP6.8□□□□□ -1.32
RPUSD4-204ENST00000530036 DEFB115Q30KQ5 88 aa6.8□□□□□ -1.32
RPUSD4-204ENST00000530036 NOL9Q5SY16 702 aaKnown RBP6.8□□□□□ -1.32
RPUSD4-204ENST00000530036 RGMBQ6NW40 437 aa6.8□□□□□ -1.32
RPUSD4-204ENST00000530036 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.8□□□□□ -1.32
RPUSD4-204ENST00000530036 MIGA2Q7L4E1 593 aa6.8□□□□□ -1.32
RPUSD4-204ENST00000530036 ZNF589Q86UQ0 364 aaPredicted RBP6.8□□□□□ -1.32
RPUSD4-204ENST00000530036 RASAL3Q86YV0 1011 aa6.8□□□□□ -1.32
RPUSD4-204ENST00000530036 ZSCAN29Q8IWY8 852 aaPredicted RBP6.8□□□□□ -1.32
RPUSD4-204ENST00000530036 ANKRD13AQ8IZ07 590 aa6.8□□□□□ -1.32
RPUSD4-204ENST00000530036 CLMNQ96JQ2 1002 aa6.8□□□□□ -1.32
RPUSD4-204ENST00000530036 CAPNS2Q96L46 248 aa6.8□□□□□ -1.32
RPUSD4-204ENST00000530036 WRNIP1Q96S55 665 aa6.8□□□□□ -1.32
RPUSD4-204ENST00000530036 ZNF341Q9BYN7 854 aa6.8□□□□□ -1.32
RPUSD4-204ENST00000530036 PI4KBQ9UBF8 816 aa6.8□□□□□ -1.32
RPUSD4-204ENST00000530036 SAP30BPQ9UHR5 308 aaKnown RBP6.8□□□□□ -1.32
RPUSD4-204ENST00000530036 TAOK2Q9UL54 1235 aa6.8□□□□□ -1.32
RPUSD4-204ENST00000530036 PALD1Q9ULE6 856 aa6.8□□□□□ -1.32
RPUSD4-204ENST00000530036 SLC4A4Q9Y6R1 1079 aa6.8□□□□□ -1.32
RPUSD4-204ENST00000530036 ZMYM6O95789 1325 aa6.79□□□□□ -1.32
RPUSD4-204ENST00000530036 CCDC171Q6TFL3 1326 aa6.79□□□□□ -1.32
RPUSD4-204ENST00000530036 RAD50Q92878 1312 aa6.79□□□□□ -1.32
RPUSD4-204ENST00000530036 SPDYE5A6NIY4 337 aa6.79□□□□□ -1.32
RPUSD4-204ENST00000530036 FAM196BA6NMK8 535 aa6.79□□□□□ -1.32
RPUSD4-204ENST00000530036 HLA-DOAP06340 250 aa6.79□□□□□ -1.32
RPUSD4-204ENST00000530036 CHMLP26374 656 aa6.79□□□□□ -1.32
RPUSD4-204ENST00000530036 INPP5BP32019 993 aa6.79□□□□□ -1.32
RPUSD4-204ENST00000530036 VEGFBP49765 207 aa6.79□□□□□ -1.32
RPUSD4-204ENST00000530036 PLCD1P51178 756 aa6.79□□□□□ -1.32
RPUSD4-204ENST00000530036 EVX2Q03828 476 aa6.79□□□□□ -1.32
RPUSD4-204ENST00000530036 VGLL4Q14135 290 aa6.79□□□□□ -1.32
RPUSD4-204ENST00000530036 MCMDC2Q4G0Z9 681 aa6.79□□□□□ -1.32
RPUSD4-204ENST00000530036 SBK1Q52WX2 424 aa6.79□□□□□ -1.32
RPUSD4-204ENST00000530036 C12orf60Q5U649 245 aa6.79□□□□□ -1.32
RPUSD4-204ENST00000530036 VPS53Q5VIR6 699 aa6.79□□□□□ -1.32
RPUSD4-204ENST00000530036 CYP4F22Q6NT55 531 aa6.79□□□□□ -1.32
RPUSD4-204ENST00000530036 CCDC129Q6ZRS4 1044 aa6.79□□□□□ -1.32
RPUSD4-204ENST00000530036 TTC6Q86TZ1 520 aa6.79□□□□□ -1.32
RPUSD4-204ENST00000530036 FOXP4Q8IVH2 680 aaPredicted RBP6.79□□□□□ -1.32
RPUSD4-204ENST00000530036 IL25Q9H293 177 aa6.79□□□□□ -1.32
RPUSD4-204ENST00000530036 PRDM10Q9NQV6 1147 aa6.79□□□□□ -1.32
RPUSD4-204ENST00000530036 DIAPH3Q9NSV4 1193 aa6.79□□□□□ -1.32
RPUSD4-204ENST00000530036 MCM9Q9NXL9 1143 aa6.79□□□□□ -1.32
RPUSD4-204ENST00000530036 ARPP21Q9UBL0 812 aaPredicted RBP6.79□□□□□ -1.32
RPUSD4-204ENST00000530036 SERPINB13Q9UIV8 391 aa6.79□□□□□ -1.32
RPUSD4-204ENST00000530036 SNCAIPQ9Y6H5 919 aa6.79□□□□□ -1.32
RPUSD4-204ENST00000530036 MYH4Q9Y623 1939 aa6.79□□□□□ -1.32
RPUSD4-204ENST00000530036 WDR33Q9C0J8 1336 aaKnown RBP6.78□□□□□ -1.32
RPUSD4-204ENST00000530036 CYP2D7A0A087X1C5 515 aa6.78□□□□□ -1.32
RPUSD4-204ENST00000530036 PATL2C9JE40 543 aaKnown RBP6.78□□□□□ -1.32
RPUSD4-204ENST00000530036 USP17L12C9JPN9 530 aa6.78□□□□□ -1.32
RPUSD4-204ENST00000530036 USP17L21D6R901 530 aa6.78□□□□□ -1.32
RPUSD4-204ENST00000530036 SMIM22K7EJ46 135 aa6.78□□□□□ -1.32
RPUSD4-204ENST00000530036 CTNND1O60716 968 aaKnown RBP6.78□□□□□ -1.32
RPUSD4-204ENST00000530036 ZBTB48P10074 688 aaPredicted RBP6.78□□□□□ -1.32
RPUSD4-204ENST00000530036 CYP2D6P10635 497 aa6.78□□□□□ -1.32
RPUSD4-204ENST00000530036 SHMT1P34896 483 aa6.78□□□□□ -1.32
RPUSD4-204ENST00000530036 GJA5P36382 358 aa6.78□□□□□ -1.32
RPUSD4-204ENST00000530036 ECE1P42892 770 aa6.78□□□□□ -1.32
RPUSD4-204ENST00000530036 ZNF157P51786 506 aaPredicted RBP6.78□□□□□ -1.32
RPUSD4-204ENST00000530036 MFAP1P55081 439 aaKnown RBP6.78□□□□□ -1.32
RPUSD4-204ENST00000530036 MAP3K9P80192 1104 aa6.78□□□□□ -1.32
RPUSD4-204ENST00000530036 NOGQ13253 232 aa6.78□□□□□ -1.32
RPUSD4-204ENST00000530036 RRP1BQ14684 758 aaKnown RBP6.78□□□□□ -1.32
RPUSD4-204ENST00000530036 ALX1Q15699 326 aa6.78□□□□□ -1.32
RPUSD4-204ENST00000530036 SLC4A8Q2Y0W8 1093 aa6.78□□□□□ -1.32
RPUSD4-204ENST00000530036 TATDN1Q6P1N9 297 aa6.78□□□□□ -1.32
RPUSD4-204ENST00000530036 CTR9Q6PD62 1173 aa6.78□□□□□ -1.32
RPUSD4-204ENST00000530036 CWC27Q6UX04 472 aaKnown RBP6.78□□□□□ -1.32
RPUSD4-204ENST00000530036 SCYL3Q8IZE3 742 aa6.78□□□□□ -1.32
RPUSD4-204ENST00000530036 IFNL3Q8IZI9 196 aa6.78□□□□□ -1.32
RPUSD4-204ENST00000530036 CRACR2BQ8N4Y2 399 aaPredicted RBP6.78□□□□□ -1.32
RPUSD4-204ENST00000530036 ZKSCAN4Q969J2 545 aaPredicted RBP6.78□□□□□ -1.32
RPUSD4-204ENST00000530036 CCDC102AQ96A19 550 aa6.78□□□□□ -1.32
RPUSD4-204ENST00000530036 DDRGK1Q96HY6 314 aa6.78□□□□□ -1.32
RPUSD4-204ENST00000530036 WNK4Q96J92 1243 aa6.78□□□□□ -1.32
RPUSD4-204ENST00000530036 ELP3Q9H9T3 547 aa6.78□□□□□ -1.32
RPUSD4-204ENST00000530036 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.78□□□□□ -1.328e-10■■■□□ 17.4
RPUSD4-204ENST00000530036 CSADQ9Y600 493 aa6.78□□□□□ -1.32
RPUSD4-204ENST00000530036 PARP14Q460N5 1801 aa6.78□□□□□ -1.32
RPUSD4-204ENST00000530036 SGSM2O43147 1006 aa6.77□□□□□ -1.33
RPUSD4-204ENST00000530036 AOC2O75106 756 aa6.77□□□□□ -1.33
RPUSD4-204ENST00000530036 POLR3DP05423 398 aaPredicted RBP6.77□□□□□ -1.33
RPUSD4-204ENST00000530036 HSPD1P10809 573 aaKnown RBP6.77□□□□□ -1.33
RPUSD4-204ENST00000530036 MAP2K2P36507 400 aa6.77□□□□□ -1.33
RPUSD4-204ENST00000530036 CAP2P40123 477 aa6.77□□□□□ -1.33
RPUSD4-204ENST00000530036 RGS19P49795 217 aa6.77□□□□□ -1.33
RPUSD4-204ENST00000530036 PPIL2Q13356 520 aa6.77□□□□□ -1.33
RPUSD4-204ENST00000530036 SPRYD7Q5W111 196 aa6.77□□□□□ -1.33
RPUSD4-204ENST00000530036 C16orf86Q6ZW13 317 aa6.77□□□□□ -1.33
RPUSD4-204ENST00000530036 PAXIP1Q6ZW49 1069 aaPredicted RBP6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms