RNA–Protein interactions for RNA: ENST00000529994.1

SF3B2-208, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-208ENST00000529994 SEMA3EO15041 775 aa14.06□□□□□ -0.16
SF3B2-208ENST00000529994 HMGCS2P54868 508 aa14.06□□□□□ -0.16
SF3B2-208ENST00000529994 RASGRF1Q13972 1273 aa14.06□□□□□ -0.16
SF3B2-208ENST00000529994 ZGPATQ8N5A5 531 aaKnown RBP14.06□□□□□ -0.16
SF3B2-208ENST00000529994 ANKLE1Q8NAG6 615 aa14.06□□□□□ -0.16
SF3B2-208ENST00000529994 C11orf49Q9H6J7 331 aa14.06□□□□□ -0.16
SF3B2-208ENST00000529994 GJD2Q9UKL4 321 aa14.06□□□□□ -0.16
SF3B2-208ENST00000529994 RPTORQ8N122 1335 aa14.06□□□□□ -0.16
SF3B2-208ENST00000529994 UNC80Q8N2C7 3258 aa14.06□□□□□ -0.16
SF3B2-208ENST00000529994 PEX10O60683 326 aa14.05□□□□□ -0.16
SF3B2-208ENST00000529994 CIAO1O76071 339 aa14.05□□□□□ -0.16
SF3B2-208ENST00000529994 CYP2B6P20813 491 aa14.05□□□□□ -0.16
SF3B2-208ENST00000529994 PROCA1Q8NCQ7 364 aaPredicted RBP14.05□□□□□ -0.16
SF3B2-208ENST00000529994 TRIB2Q92519 343 aa14.05□□□□□ -0.16
SF3B2-208ENST00000529994 UBE2OQ9C0C9 1292 aaKnown RBP14.05□□□□□ -0.16
SF3B2-208ENST00000529994 ASCC2Q9H1I8 757 aaPredicted RBP14.05□□□□□ -0.16
SF3B2-208ENST00000529994 UBTFL1P0CB47 393 aaPredicted RBP14.04□□□□□ -0.16
SF3B2-208ENST00000529994 GCLCP48506 637 aaPredicted RBP14.04□□□□□ -0.16
SF3B2-208ENST00000529994 TIMM10P62072 90 aa14.04□□□□□ -0.16
SF3B2-208ENST00000529994 GPR153Q6NV75 609 aa14.04□□□□□ -0.16
SF3B2-208ENST00000529994 SLF2Q8IX21 1173 aa14.04□□□□□ -0.16
SF3B2-208ENST00000529994 TDHQ8IZJ6 230 aa14.04□□□□□ -0.16
SF3B2-208ENST00000529994 ZNF280CQ8ND82 737 aa14.04□□□□□ -0.16
SF3B2-208ENST00000529994 SMC4Q9NTJ3 1288 aa14.04□□□□□ -0.16
SF3B2-208ENST00000529994 MTMR10Q9NXD2 777 aa14.04□□□□□ -0.16
SF3B2-208ENST00000529994 STXBP5LQ9Y2K9 1186 aa14.04□□□□□ -0.16
SF3B2-208ENST00000529994 MROH7-TTC4A0A0A0MT08 1334 aa14.04□□□□□ -0.16
SF3B2-208ENST00000529994 IL15P40933 162 aaPredicted RBP14.03□□□□□ -0.16
SF3B2-208ENST00000529994 RHBDL3P58872 404 aa14.03□□□□□ -0.16
SF3B2-208ENST00000529994 MECOMQ03112 1051 aa14.03□□□□□ -0.16
SF3B2-208ENST00000529994 RRP1BQ14684 758 aaKnown RBP14.03□□□□□ -0.16
SF3B2-208ENST00000529994 LRIT3Q3SXY7 679 aa14.03□□□□□ -0.16
SF3B2-208ENST00000529994 ZNF384Q8TF68 577 aa14.03□□□□□ -0.16
SF3B2-208ENST00000529994 FAM163AQ96GL9 167 aaPredicted RBP14.03□□□□□ -0.16
SF3B2-208ENST00000529994 FBXO3Q9UK99 471 aa14.03□□□□□ -0.16
SF3B2-208ENST00000529994 PFASO15067 1338 aa14.02□□□□□ -0.17
SF3B2-208ENST00000529994 GPR75-ASB3A0A0A6YYF3 556 aa14.02□□□□□ -0.17
SF3B2-208ENST00000529994 TBC1D12O60347 775 aa14.02□□□□□ -0.17
SF3B2-208ENST00000529994 PRKAR2AP13861 404 aaKnown RBP14.02□□□□□ -0.17
SF3B2-208ENST00000529994 PABPC4Q13310 644 aaKnown RBP eCLIP14.02□□□□□ -0.17
SF3B2-208ENST00000529994 SPTY2D1Q68D10 685 aaPredicted RBP14.02□□□□□ -0.17
SF3B2-208ENST00000529994 ERICH6Q7L0X2 663 aa14.02□□□□□ -0.17
SF3B2-208ENST00000529994 OSBPL5Q9H0X9 879 aaPredicted RBP14.02□□□□□ -0.17
SF3B2-208ENST00000529994 OGDHLQ9ULD0 1010 aa14.02□□□□□ -0.17
SF3B2-208ENST00000529994 USP17L5A8MUK1 530 aa14.01□□□□□ -0.17
SF3B2-208ENST00000529994 IRX3P78415 501 aaPredicted RBP14.01□□□□□ -0.17
SF3B2-208ENST00000529994 MDM2Q00987 491 aaPredicted RBP14.01□□□□□ -0.17
SF3B2-208ENST00000529994 PI16Q6UXB8 463 aa14.01□□□□□ -0.17
SF3B2-208ENST00000529994 TBC1D9Q6ZT07 1266 aa14.01□□□□□ -0.17
SF3B2-208ENST00000529994 LAMA2P24043 3122 aaKnown RBP14.01□□□□□ -0.17
SF3B2-208ENST00000529994 DNAH12Q6ZR08 3092 aa14.01□□□□□ -0.17
SF3B2-208ENST00000529994 A0A1B0GUL7 405 aa14□□□□□ -0.17
SF3B2-208ENST00000529994 CAP2P40123 477 aa14□□□□□ -0.17
SF3B2-208ENST00000529994 MTMR2Q13614 643 aa14□□□□□ -0.17
SF3B2-208ENST00000529994 XAGE2Q96GT9 111 aa14□□□□□ -0.17
SF3B2-208ENST00000529994 P2RX7Q99572 595 aaKnown RBP14□□□□□ -0.17
SF3B2-208ENST00000529994 COL25A1Q9BXS0 654 aaPredicted RBP14□□□□□ -0.17
SF3B2-208ENST00000529994 TXNRD2Q9NNW7 524 aa14□□□□□ -0.17
SF3B2-208ENST00000529994 MORF4L1Q9UBU8 362 aa14□□□□□ -0.17
SF3B2-208ENST00000529994 CCND3P30281 292 aaPredicted RBP13.99□□□□□ -0.17
SF3B2-208ENST00000529994 HNRNPUQ00839 825 aaKnown RBP eCLIP13.99□□□□□ -0.17
SF3B2-208ENST00000529994 CACNB2Q08289 660 aaPredicted RBP13.99□□□□□ -0.17
SF3B2-208ENST00000529994 TFCP2Q12800 502 aa13.99□□□□□ -0.17
SF3B2-208ENST00000529994 LRRC26Q2I0M4 334 aa13.99□□□□□ -0.17
SF3B2-208ENST00000529994 SH3D19Q5HYK7 790 aa13.99□□□□□ -0.17
SF3B2-208ENST00000529994 MAP3K21Q5TCX8 1036 aa13.99□□□□□ -0.17
SF3B2-208ENST00000529994 FAM161BQ96MY7 647 aa13.99□□□□□ -0.17
SF3B2-208ENST00000529994 NUDT12Q9BQG2 462 aa13.99□□□□□ -0.17
SF3B2-208ENST00000529994 AS3MTQ9HBK9 375 aa13.99□□□□□ -0.17
SF3B2-208ENST00000529994 COPRSQ9NQ92 184 aa13.99□□□□□ -0.17
SF3B2-208ENST00000529994 RAI14Q9P0K7 980 aa13.99□□□□□ -0.17
SF3B2-208ENST00000529994 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.99□□□□□ -0.17
SF3B2-208ENST00000529994 SIPA1L1O43166 1804 aa13.99□□□□□ -0.17
SF3B2-208ENST00000529994 PDS5AQ29RF7 1337 aaKnown RBP13.98□□□□□ -0.17
SF3B2-208ENST00000529994 ZKSCAN1P17029 563 aaPredicted RBP13.98□□□□□ -0.17
SF3B2-208ENST00000529994 JAG1P78504 1218 aa13.98□□□□□ -0.17
SF3B2-208ENST00000529994 CCL14Q16627 93 aa13.98□□□□□ -0.17
SF3B2-208ENST00000529994 SHROOM1Q2M3G4 852 aaPredicted RBP13.98□□□□□ -0.17
SF3B2-208ENST00000529994 ALDH1L2Q3SY69 923 aa13.98□□□□□ -0.17
SF3B2-208ENST00000529994 TEX11Q8IYF3 940 aa13.98□□□□□ -0.17
SF3B2-208ENST00000529994 GPRC5AQ8NFJ5 357 aa13.98□□□□□ -0.17
SF3B2-208ENST00000529994 NSUN4Q96CB9 384 aaKnown RBP13.98□□□□□ -0.17
SF3B2-208ENST00000529994 NEUROD6Q96NK8 337 aa13.98□□□□□ -0.17
SF3B2-208ENST00000529994 TBC1D2Q9BYX2 928 aa13.98□□□□□ -0.17
SF3B2-208ENST00000529994 TMOD4Q9NZQ9 345 aa13.98□□□□□ -0.17
SF3B2-208ENST00000529994 HMG20BQ9P0W2 317 aa13.98□□□□□ -0.17
SF3B2-208ENST00000529994 FRMPD3Q5JV73 1810 aa13.97□□□□□ -0.17
SF3B2-208ENST00000529994 ZBTB22O15209 634 aa13.97□□□□□ -0.17
SF3B2-208ENST00000529994 NPM3O75607 178 aaKnown RBP13.97□□□□□ -0.17
SF3B2-208ENST00000529994 LDHCP07864 332 aa13.97□□□□□ -0.17
SF3B2-208ENST00000529994 COL6A1P12109 1028 aa13.97□□□□□ -0.17
SF3B2-208ENST00000529994 HERVK_113P62684 666 aa13.97□□□□□ -0.17
SF3B2-208ENST00000529994 GSTO1P78417 241 aa13.97□□□□□ -0.17
SF3B2-208ENST00000529994 PDE3AQ14432 1141 aa13.97□□□□□ -0.17
SF3B2-208ENST00000529994 MVPQ14764 893 aaKnown RBP13.97□□□□□ -0.17
SF3B2-208ENST00000529994 Q3C1V9 767 aa13.97□□□□□ -0.17
SF3B2-208ENST00000529994 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.97□□□□□ -0.17
SF3B2-208ENST00000529994 CCAR1Q8IX12 1150 aaKnown RBP13.97□□□□□ -0.17
SF3B2-208ENST00000529994 TRMT2AQ8IZ69 625 aaKnown RBP13.97□□□□□ -0.17
SF3B2-208ENST00000529994 SPATA5Q8NB90 893 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms