RNA–Protein interactions for RNA: ENST00000529745.5

CCDC90B-215, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-215ENST00000529745 CRBNQ96SW2 442 aa18.78■□□□□ 0.6
CCDC90B-215ENST00000529745 HAUS7Q99871 368 aa18.78■□□□□ 0.6
CCDC90B-215ENST00000529745 R3HDMLQ9H3Y0 253 aa18.78■□□□□ 0.6
CCDC90B-215ENST00000529745 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.78■□□□□ 0.6
CCDC90B-215ENST00000529745 CACNB1Q02641 598 aaPredicted RBP18.77■□□□□ 0.6
CCDC90B-215ENST00000529745 TGFBRAP1Q8WUH2 860 aa18.77■□□□□ 0.6
CCDC90B-215ENST00000529745 RIOK1Q9BRS2 568 aaKnown RBP18.77■□□□□ 0.6
CCDC90B-215ENST00000529745 PI4KBQ9UBF8 816 aa18.77■□□□□ 0.6
CCDC90B-215ENST00000529745 LOC285556D6RIA3 1793 aa18.77■□□□□ 0.6
CCDC90B-215ENST00000529745 TCRBV5S4A2TA0A5A2 114 aa18.76■□□□□ 0.59
CCDC90B-215ENST00000529745 CXCL11O14625 94 aa18.76■□□□□ 0.59
CCDC90B-215ENST00000529745 SMARCA5O60264 1052 aaPredicted RBP18.76■□□□□ 0.59
CCDC90B-215ENST00000529745 FKTNO75072 461 aa18.76■□□□□ 0.59
CCDC90B-215ENST00000529745 PDE6AP16499 860 aa18.76■□□□□ 0.59
CCDC90B-215ENST00000529745 HOXD11P31277 338 aaPredicted RBP18.76■□□□□ 0.59
CCDC90B-215ENST00000529745 DYNLL1P63167 89 aaKnown RBP18.76■□□□□ 0.59
CCDC90B-215ENST00000529745 PKN2Q16513 984 aaKnown RBP18.76■□□□□ 0.59
CCDC90B-215ENST00000529745 PAG1Q9NWQ8 432 aa18.76■□□□□ 0.59
CCDC90B-215ENST00000529745 GOLIM4O00461 696 aa18.75■□□□□ 0.59
CCDC90B-215ENST00000529745 PTPRAP18433 802 aa18.75■□□□□ 0.59
CCDC90B-215ENST00000529745 FXR1P51114 621 aaKnown RBP eCLIP18.75■□□□□ 0.59
CCDC90B-215ENST00000529745 CRHR2Q13324 411 aa18.75■□□□□ 0.59
CCDC90B-215ENST00000529745 FOXP4Q8IVH2 680 aaPredicted RBP18.75■□□□□ 0.59
CCDC90B-215ENST00000529745 DNAJC2Q99543 621 aaKnown RBP18.75■□□□□ 0.59
CCDC90B-215ENST00000529745 TBC1D2Q9BYX2 928 aa18.75■□□□□ 0.59
CCDC90B-215ENST00000529745 BOLA2Q9H3K6 86 aa18.75■□□□□ 0.59
CCDC90B-215ENST00000529745 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.75■□□□□ 0.59
CCDC90B-215ENST00000529745 SLURP2P0DP57 97 aa18.74■□□□□ 0.59
CCDC90B-215ENST00000529745 MOGSQ13724 837 aa18.74■□□□□ 0.59
CCDC90B-215ENST00000529745 SLC9C2Q5TAH2 1124 aa18.74■□□□□ 0.59
CCDC90B-215ENST00000529745 MAPKAPK5Q8IW41 473 aa18.74■□□□□ 0.59
CCDC90B-215ENST00000529745 FAM43AQ8N2R8 423 aa18.74■□□□□ 0.59
CCDC90B-215ENST00000529745 PICK1Q9NRD5 415 aa18.74■□□□□ 0.59
CCDC90B-215ENST00000529745 ECHDC1Q9NTX5 307 aa18.74■□□□□ 0.59
CCDC90B-215ENST00000529745 AFG3L2Q9Y4W6 797 aa18.74■□□□□ 0.59
CCDC90B-215ENST00000529745 BTBD19C9JJ37 291 aa18.73■□□□□ 0.59
CCDC90B-215ENST00000529745 ADD2P35612 726 aa18.73■□□□□ 0.59
CCDC90B-215ENST00000529745 CAP2P40123 477 aa18.73■□□□□ 0.59
CCDC90B-215ENST00000529745 HDAC1Q13547 482 aaPredicted RBP18.73■□□□□ 0.59
CCDC90B-215ENST00000529745 ANKRD23Q86SG2 305 aa18.73■□□□□ 0.59
CCDC90B-215ENST00000529745 MIGA1Q8NAN2 632 aa18.73■□□□□ 0.59
CCDC90B-215ENST00000529745 EDC3Q96F86 508 aaKnown RBP18.73■□□□□ 0.59
CCDC90B-215ENST00000529745 GINM1Q9NU53 330 aa18.73■□□□□ 0.59
CCDC90B-215ENST00000529745 ZNF532Q9HCE3 1301 aa18.73■□□□□ 0.59
CCDC90B-215ENST00000529745 A0A0G2JLL6 359 aaPredicted RBP18.72■□□□□ 0.59
CCDC90B-215ENST00000529745 TAF1CQ15572 869 aaPredicted RBP18.72■□□□□ 0.59
CCDC90B-215ENST00000529745 PRRT2Q7Z6L0 340 aaPredicted RBP18.72■□□□□ 0.59
CCDC90B-215ENST00000529745 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.72■□□□□ 0.59
CCDC90B-215ENST00000529745 EHD4Q9H223 541 aa18.72■□□□□ 0.59
CCDC90B-215ENST00000529745 DNAJC18Q9H819 358 aa18.72■□□□□ 0.59
CCDC90B-215ENST00000529745 ZFYVE28Q9HCC9 887 aa18.72■□□□□ 0.59
CCDC90B-215ENST00000529745 MYH8P13535 1937 aa18.72■□□□□ 0.59
CCDC90B-215ENST00000529745 SZT2Q5T011 3432 aa18.72■□□□□ 0.59
CCDC90B-215ENST00000529745 TTC41PQ6P2S7 1318 aa18.72■□□□□ 0.59
CCDC90B-215ENST00000529745 MAGEB6P1A0A0J9YX57 407 aa18.71■□□□□ 0.59
CCDC90B-215ENST00000529745 FAM196BA6NMK8 535 aa18.71■□□□□ 0.59
CCDC90B-215ENST00000529745 UBE3CQ15386 1083 aa18.71■□□□□ 0.59
CCDC90B-215ENST00000529745 GPATCH3Q96I76 525 aa18.71■□□□□ 0.59
CCDC90B-215ENST00000529745 PALD1Q9ULE6 856 aa18.71■□□□□ 0.59
CCDC90B-215ENST00000529745 ZHX2Q9Y6X8 837 aa18.71■□□□□ 0.59
CCDC90B-215ENST00000529745 BAZ2AQ9UIF9 1905 aaKnown RBP18.7■□□□□ 0.58
CCDC90B-215ENST00000529745 TLR2O60603 784 aa18.7■□□□□ 0.58
CCDC90B-215ENST00000529745 HLA-DOAP06340 250 aa18.7■□□□□ 0.58
CCDC90B-215ENST00000529745 USP5P45974 858 aa18.7■□□□□ 0.58
CCDC90B-215ENST00000529745 RRP1BQ14684 758 aaKnown RBP18.7■□□□□ 0.58
CCDC90B-215ENST00000529745 ERO1AQ96HE7 468 aa18.7■□□□□ 0.58
CCDC90B-215ENST00000529745 CRNKL1Q9BZJ0 848 aaKnown RBP18.7■□□□□ 0.58
CCDC90B-215ENST00000529745 TAOK2Q9UL54 1235 aa18.7■□□□□ 0.58
CCDC90B-215ENST00000529745 SLC45A1Q9Y2W3 748 aa18.7■□□□□ 0.58
CCDC90B-215ENST00000529745 SALL3Q9BXA9 1300 aa18.7■□□□□ 0.58
CCDC90B-215ENST00000529745 CENPFP49454 3210 aa18.7■□□□□ 0.58
CCDC90B-215ENST00000529745 HTTP42858 3142 aa18.69■□□□□ 0.58
CCDC90B-215ENST00000529745 SP3Q02447 781 aa18.69■□□□□ 0.58
CCDC90B-215ENST00000529745 ZSCAN25Q6NSZ9 544 aa18.69■□□□□ 0.58
CCDC90B-215ENST00000529745 GPAT2Q6NUI2 795 aa18.69■□□□□ 0.58
CCDC90B-215ENST00000529745 FASTKD5Q7L8L6 764 aaKnown RBP18.69■□□□□ 0.58
CCDC90B-215ENST00000529745 ADGRA2Q96PE1 1338 aa18.69■□□□□ 0.58
CCDC90B-215ENST00000529745 MGAMO43451 1857 aa18.69■□□□□ 0.58
CCDC90B-215ENST00000529745 ASNSP08243 561 aa18.68■□□□□ 0.58
CCDC90B-215ENST00000529745 TATDN1Q6P1N9 297 aa18.68■□□□□ 0.58
CCDC90B-215ENST00000529745 TTC6Q86TZ1 520 aa18.68■□□□□ 0.58
CCDC90B-215ENST00000529745 KBTBD3Q8NAB2 608 aa18.68■□□□□ 0.58
CCDC90B-215ENST00000529745 A0A0C4DFX4 3053 aa18.67■□□□□ 0.58
CCDC90B-215ENST00000529745 USP17L5A8MUK1 530 aa18.67■□□□□ 0.58
CCDC90B-215ENST00000529745 PDHXO00330 501 aa18.67■□□□□ 0.58
CCDC90B-215ENST00000529745 SH3D19Q5HYK7 790 aa18.67■□□□□ 0.58
CCDC90B-215ENST00000529745 FBXO46Q6PJ61 603 aaPredicted RBP18.67■□□□□ 0.58
CCDC90B-215ENST00000529745 LCORLQ8N3X6 602 aa18.67■□□□□ 0.58
CCDC90B-215ENST00000529745 CRACR2BQ8N4Y2 399 aaPredicted RBP18.67■□□□□ 0.58
CCDC90B-215ENST00000529745 PI4K2BQ8TCG2 481 aa18.67■□□□□ 0.58
CCDC90B-215ENST00000529745 WDR18Q9BV38 432 aa18.67■□□□□ 0.58
CCDC90B-215ENST00000529745 BCL11AQ9H165 835 aa18.67■□□□□ 0.58
CCDC90B-215ENST00000529745 SAP30BPQ9UHR5 308 aaKnown RBP18.67■□□□□ 0.58
CCDC90B-215ENST00000529745 SERPINB13Q9UIV8 391 aa18.67■□□□□ 0.58
CCDC90B-215ENST00000529745 ZSWIM8A7E2V4 1837 aa18.67■□□□□ 0.58
CCDC90B-215ENST00000529745 ERC2O15083 957 aa18.66■□□□□ 0.58
CCDC90B-215ENST00000529745 GABPAQ06546 454 aa18.66■□□□□ 0.58
CCDC90B-215ENST00000529745 C17orf99Q6UX52 265 aa18.66■□□□□ 0.58
CCDC90B-215ENST00000529745 PROCA1Q8NCQ7 364 aaPredicted RBP18.66■□□□□ 0.58
CCDC90B-215ENST00000529745 ZNF280CQ8ND82 737 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms