RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 CDC37L1Q7L3B6 337 aa7.65□□□□□ -1.18
C11orf88-204ENST00000529661 UBE3DQ7Z6J8 389 aa7.65□□□□□ -1.18
C11orf88-204ENST00000529661 UNCXA6NJT0 531 aa7.64□□□□□ -1.19
C11orf88-204ENST00000529661 ZNF16P17020 682 aaPredicted RBP7.64□□□□□ -1.19
C11orf88-204ENST00000529661 RING1Q06587 406 aa7.64□□□□□ -1.19
C11orf88-204ENST00000529661 CYP27C1Q4G0S4 372 aa7.64□□□□□ -1.19
C11orf88-204ENST00000529661 JARID2Q92833 1246 aaPredicted RBP7.64□□□□□ -1.19
C11orf88-204ENST00000529661 KIAA1324LA8MWY0 1029 aaPredicted RBP7.63□□□□□ -1.19
C11orf88-204ENST00000529661 ETF1P62495 437 aaKnown RBP7.63□□□□□ -1.19
C11orf88-204ENST00000529661 TOP6BLQ8N6T0 577 aa7.63□□□□□ -1.19
C11orf88-204ENST00000529661 PHC3Q8NDX5 983 aa7.63□□□□□ -1.19
C11orf88-204ENST00000529661 LEFTY1O75610 366 aa7.62□□□□□ -1.19
C11orf88-204ENST00000529661 SPINK2P20155 84 aa7.62□□□□□ -1.19
C11orf88-204ENST00000529661 GBP2P32456 591 aaPredicted RBP7.62□□□□□ -1.19
C11orf88-204ENST00000529661 CYFIP1Q7L576 1253 aa7.62□□□□□ -1.19
C11orf88-204ENST00000529661 RELL1Q8IUW5 271 aa7.62□□□□□ -1.19
C11orf88-204ENST00000529661 ZNF507Q8TCN5 953 aa7.62□□□□□ -1.19
C11orf88-204ENST00000529661 DUSP23Q9BVJ7 150 aa7.62□□□□□ -1.19
C11orf88-204ENST00000529661 SNCAIPQ9Y6H5 919 aa7.62□□□□□ -1.19
C11orf88-204ENST00000529661 TSNAXIP1Q2TAA8 658 aa7.61□□□□□ -1.19
C11orf88-204ENST00000529661 DTX1Q86Y01 620 aa7.61□□□□□ -1.19
C11orf88-204ENST00000529661 KCT2Q8NC54 265 aa7.61□□□□□ -1.19
C11orf88-204ENST00000529661 PSMG3-AS1Q96PY0 264 aa7.61□□□□□ -1.19
C11orf88-204ENST00000529661 WNT10AQ9GZT5 417 aa7.61□□□□□ -1.19
C11orf88-204ENST00000529661 CAMK2GQ13555 558 aaPredicted RBP7.6□□□□□ -1.19
C11orf88-204ENST00000529661 MRPL58Q14197 206 aaKnown RBP7.6□□□□□ -1.19
C11orf88-204ENST00000529661 MSMPQ1L6U9 139 aa7.6□□□□□ -1.19
C11orf88-204ENST00000529661 DIEXFQ68CQ4 756 aaKnown RBP7.6□□□□□ -1.19
C11orf88-204ENST00000529661 BNC2Q6ZN30 1099 aaPredicted RBP7.6□□□□□ -1.19
C11orf88-204ENST00000529661 ARMCX6Q7L4S7 300 aa7.6□□□□□ -1.19
C11orf88-204ENST00000529661 FAM181AQ8N9Y4 354 aa7.6□□□□□ -1.19
C11orf88-204ENST00000529661 TMEM74Q96NL1 305 aa7.6□□□□□ -1.19
C11orf88-204ENST00000529661 KRTAP4-8Q9BYQ9 185 aa7.6□□□□□ -1.19
C11orf88-204ENST00000529661 FBRSQ9HAH7 460 aa7.6□□□□□ -1.19
C11orf88-204ENST00000529661 MINDY4BA8MYZ0 360 aa7.59□□□□□ -1.19
C11orf88-204ENST00000529661 PF4P02776 101 aa7.59□□□□□ -1.19
C11orf88-204ENST00000529661 GRK4P32298 578 aa7.59□□□□□ -1.19
C11orf88-204ENST00000529661 FAM160A1Q05DH4 1040 aa7.59□□□□□ -1.19
C11orf88-204ENST00000529661 PRDM10Q9NQV6 1147 aa7.59□□□□□ -1.19
C11orf88-204ENST00000529661 KIAA1522Q9P206 1035 aaPredicted RBP7.59□□□□□ -1.19
C11orf88-204ENST00000529661 ZC3H7BQ9UGR2 993 aaKnown RBP7.59□□□□□ -1.19
C11orf88-204ENST00000529661 ANGEL1Q9UNK9 670 aaKnown RBP7.59□□□□□ -1.19
C11orf88-204ENST00000529661 GFRA2O00451 464 aa7.58□□□□□ -1.2
C11orf88-204ENST00000529661 ADAMTS4O75173 837 aa7.58□□□□□ -1.2
C11orf88-204ENST00000529661 BPNT1O95861 308 aa7.58□□□□□ -1.2
C11orf88-204ENST00000529661 LMNB2Q03252 620 aa7.58□□□□□ -1.2
C11orf88-204ENST00000529661 PWP1Q13610 501 aa7.58□□□□□ -1.2
C11orf88-204ENST00000529661 NKG7Q16617 165 aa7.58□□□□□ -1.2
C11orf88-204ENST00000529661 ARHGAP27Q6ZUM4 889 aa7.58□□□□□ -1.2
C11orf88-204ENST00000529661 RSRP1Q9BUV0 290 aa7.58□□□□□ -1.2
C11orf88-204ENST00000529661 COPRSQ9NQ92 184 aa7.58□□□□□ -1.2
C11orf88-204ENST00000529661 KBTBD4Q9NVX7 518 aa7.58□□□□□ -1.2
C11orf88-204ENST00000529661 LRIG2O94898 1065 aa7.57□□□□□ -1.2
C11orf88-204ENST00000529661 WNT11O96014 354 aa7.57□□□□□ -1.2
C11orf88-204ENST00000529661 F13A1P00488 732 aa7.57□□□□□ -1.2
C11orf88-204ENST00000529661 RPL6Q02878 288 aaKnown RBP7.57□□□□□ -1.2
C11orf88-204ENST00000529661 SNAP47Q5SQN1 464 aa7.57□□□□□ -1.2
C11orf88-204ENST00000529661 HID1Q8IV36 788 aa7.57□□□□□ -1.2
C11orf88-204ENST00000529661 MRRFQ96E11 262 aaKnown RBP7.57□□□□□ -1.2
C11orf88-204ENST00000529661 RHOVQ96L33 236 aa7.57□□□□□ -1.2
C11orf88-204ENST00000529661 BSDC1Q9NW68 430 aaPredicted RBP7.57□□□□□ -1.2
C11orf88-204ENST00000529661 GGT7Q9UJ14 662 aa7.57□□□□□ -1.2
C11orf88-204ENST00000529661 PGRP06401 933 aa7.56□□□□□ -1.2
C11orf88-204ENST00000529661 SLBPQ14493 270 aaKnown RBP eCLIP7.56□□□□□ -1.2
C11orf88-204ENST00000529661 ERMP1Q7Z2K6 904 aa7.56□□□□□ -1.2
C11orf88-204ENST00000529661 CCDC84Q86UT8 332 aaPredicted RBP7.56□□□□□ -1.2
C11orf88-204ENST00000529661 VSIG10LQ86VR7 867 aa7.56□□□□□ -1.2
C11orf88-204ENST00000529661 PLD6Q8N2A8 252 aaKnown RBP7.56□□□□□ -1.2
C11orf88-204ENST00000529661 GOLM1Q8NBJ4 401 aa7.56□□□□□ -1.2
C11orf88-204ENST00000529661 TMEM87AQ8NBN3 555 aa7.56□□□□□ -1.2
C11orf88-204ENST00000529661 XAGE3Q8WTP9 111 aa7.56□□□□□ -1.2
C11orf88-204ENST00000529661 FOXQ1Q9C009 403 aa7.56□□□□□ -1.2
C11orf88-204ENST00000529661 IGSF5Q9NSI5 407 aa7.56□□□□□ -1.2
C11orf88-204ENST00000529661 U3KQE9 123 aa7.56□□□□□ -1.2
C11orf88-204ENST00000529661 ITIH2P19823 946 aa7.55□□□□□ -1.2
C11orf88-204ENST00000529661 GP2P55259 537 aaKnown RBP7.55□□□□□ -1.2
C11orf88-204ENST00000529661 PDE4BQ07343 736 aa7.55□□□□□ -1.2
C11orf88-204ENST00000529661 PRAMEF13Q5VWM6 474 aa7.55□□□□□ -1.2
C11orf88-204ENST00000529661 HS2ST1Q7LGA3 356 aa7.55□□□□□ -1.2
C11orf88-204ENST00000529661 MIPEPQ99797 713 aa7.55□□□□□ -1.2
C11orf88-204ENST00000529661 DPH2Q9BQC3 489 aaPredicted RBP7.55□□□□□ -1.2
C11orf88-204ENST00000529661 CCDC39Q9UFE4 941 aa7.55□□□□□ -1.2
C11orf88-204ENST00000529661 TACC3Q9Y6A5 838 aa7.55□□□□□ -1.2
C11orf88-204ENST00000529661 FAM221AA4D161 298 aa7.54□□□□□ -1.2
C11orf88-204ENST00000529661 CILPO75339 1184 aa7.54□□□□□ -1.2
C11orf88-204ENST00000529661 VAMP1P23763 118 aa7.54□□□□□ -1.2
C11orf88-204ENST00000529661 GATAD2BQ8WXI9 593 aa7.54□□□□□ -1.2
C11orf88-204ENST00000529661 HEXIM2Q96MH2 286 aaKnown RBP7.54□□□□□ -1.2
C11orf88-204ENST00000529661 GTF2IRD1Q9UHL9 959 aa7.54□□□□□ -1.2
C11orf88-204ENST00000529661 CORINQ9Y5Q5 1042 aa7.54□□□□□ -1.2
C11orf88-204ENST00000529661 SLITRK5O94991 958 aa7.53□□□□□ -1.2
C11orf88-204ENST00000529661 EOMESO95936 686 aa7.53□□□□□ -1.2
C11orf88-204ENST00000529661 PRNPP04156 253 aa7.53□□□□□ -1.2
C11orf88-204ENST00000529661 FLCNQ8NFG4 579 aa7.53□□□□□ -1.2
C11orf88-204ENST00000529661 NETO1Q8TDF5 533 aa7.53□□□□□ -1.2
C11orf88-204ENST00000529661 BACH2Q9BYV9 841 aa7.53□□□□□ -1.2
C11orf88-204ENST00000529661 PRDM5Q9NQX1 630 aaPredicted RBP7.53□□□□□ -1.2
C11orf88-204ENST00000529661 TJP2Q9UDY2 1190 aa7.53□□□□□ -1.2
C11orf88-204ENST00000529661 TPX2Q9ULW0 747 aaKnown RBP7.53□□□□□ -1.2
C11orf88-204ENST00000529661 OAS3Q9Y6K5 1087 aaKnown RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms