RNA–Protein interactions for RNA: ENST00000529251.1

TCN1-202, Transcript of transcobalamin 1, humanhuman

TSL 3

Gene TCN1, Length 476 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCN1-202ENST00000529251 IRAK1P51617 712 aa6.33□□□□□ -1.4
TCN1-202ENST00000529251 CDK5R2Q13319 367 aa6.33□□□□□ -1.4
TCN1-202ENST00000529251 MAP1SQ66K74 1059 aaPredicted RBP6.33□□□□□ -1.4
TCN1-202ENST00000529251 TTBK2Q6IQ55 1244 aa6.33□□□□□ -1.4
TCN1-202ENST00000529251 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.33□□□□□ -1.4
TCN1-202ENST00000529251 GPBAR1Q8TDU6 330 aa6.33□□□□□ -1.4
TCN1-202ENST00000529251 EMILIN2Q9BXX0 1053 aa6.33□□□□□ -1.4
TCN1-202ENST00000529251 CEP44Q9C0F1 390 aa6.33□□□□□ -1.4
TCN1-202ENST00000529251 PIDD1Q9HB75 910 aa6.33□□□□□ -1.4
TCN1-202ENST00000529251 BSDC1Q9NW68 430 aaPredicted RBP6.33□□□□□ -1.4
TCN1-202ENST00000529251 ADGRE2Q9UHX3 823 aa6.33□□□□□ -1.4
TCN1-202ENST00000529251 PF4P02776 101 aa6.32□□□□□ -1.4
TCN1-202ENST00000529251 HCLS1P14317 486 aaPredicted RBP6.32□□□□□ -1.4
TCN1-202ENST00000529251 ST13P50502 369 aaKnown RBP6.32□□□□□ -1.4
TCN1-202ENST00000529251 ERVK-24P63145 666 aa6.32□□□□□ -1.4
TCN1-202ENST00000529251 HNRNPUQ00839 825 aaKnown RBP eCLIP6.32□□□□□ -1.4
TCN1-202ENST00000529251 SV2BQ7L1I2 683 aa6.32□□□□□ -1.4
TCN1-202ENST00000529251 ERMP1Q7Z2K6 904 aa6.32□□□□□ -1.4
TCN1-202ENST00000529251 USP48Q86UV5 1035 aa6.32□□□□□ -1.4
TCN1-202ENST00000529251 VSIG10LQ86VR7 867 aa6.32□□□□□ -1.4
TCN1-202ENST00000529251 ABI1Q8IZP0 508 aa6.32□□□□□ -1.4
TCN1-202ENST00000529251 PHC3Q8NDX5 983 aa6.32□□□□□ -1.4
TCN1-202ENST00000529251 FBXO27Q8NI29 283 aa6.32□□□□□ -1.4
TCN1-202ENST00000529251 JARID2Q92833 1246 aaPredicted RBP6.32□□□□□ -1.4
TCN1-202ENST00000529251 LRRC4CQ9HCJ2 640 aa6.32□□□□□ -1.4
TCN1-202ENST00000529251 ADAMTS1Q9UHI8 967 aa6.32□□□□□ -1.4
TCN1-202ENST00000529251 NTF4P34130 210 aa6.31□□□□□ -1.4
TCN1-202ENST00000529251 BNC2Q6ZN30 1099 aaPredicted RBP6.31□□□□□ -1.4
TCN1-202ENST00000529251 HS2ST1Q7LGA3 356 aa6.31□□□□□ -1.4
TCN1-202ENST00000529251 ISL2Q96A47 359 aa6.31□□□□□ -1.4
TCN1-202ENST00000529251 KRTAP4-12Q9BQ66 201 aa6.31□□□□□ -1.4
TCN1-202ENST00000529251 DDX41Q9UJV9 622 aaKnown RBP6.31□□□□□ -1.4
TCN1-202ENST00000529251 ANGEL1Q9UNK9 670 aaKnown RBP6.31□□□□□ -1.4
TCN1-202ENST00000529251 CSADQ9Y600 493 aa6.31□□□□□ -1.4
TCN1-202ENST00000529251 TLR3O15455 904 aaKnown RBP6.3□□□□□ -1.4
TCN1-202ENST00000529251 FAM87AP0C7U9 286 aa6.3□□□□□ -1.4
TCN1-202ENST00000529251 TAL1P17542 331 aaPredicted RBP6.3□□□□□ -1.4
TCN1-202ENST00000529251 RING1Q06587 406 aa6.3□□□□□ -1.4
TCN1-202ENST00000529251 FBXL19Q6PCT2 694 aa6.3□□□□□ -1.4
TCN1-202ENST00000529251 WFDC3Q8IUB2 231 aa6.3□□□□□ -1.4
TCN1-202ENST00000529251 RNF214Q8ND24 703 aa6.3□□□□□ -1.4
TCN1-202ENST00000529251 PCOLCE2Q9UKZ9 415 aa6.3□□□□□ -1.4
TCN1-202ENST00000529251 U3KQE9 123 aa6.3□□□□□ -1.4
TCN1-202ENST00000529251 RNGTTO60942 597 aaKnown RBP6.29□□□□□ -1.4
TCN1-202ENST00000529251 TRIM37O94972 964 aa6.29□□□□□ -1.4
TCN1-202ENST00000529251 GARTP22102 1010 aa6.29□□□□□ -1.4
TCN1-202ENST00000529251 CAMK2GQ13555 558 aaPredicted RBP6.29□□□□□ -1.4
TCN1-202ENST00000529251 CYP27C1Q4G0S4 372 aa6.29□□□□□ -1.4
TCN1-202ENST00000529251 AGMOQ6ZNB7 445 aa6.29□□□□□ -1.4
TCN1-202ENST00000529251 CBLL1Q75N03 491 aa6.29□□□□□ -1.4
TCN1-202ENST00000529251 RELL1Q8IUW5 271 aa6.29□□□□□ -1.4
TCN1-202ENST00000529251 GAL3ST3Q96A11 431 aa6.29□□□□□ -1.4
TCN1-202ENST00000529251 ACSBG1Q96GR2 724 aa6.29□□□□□ -1.4
TCN1-202ENST00000529251 RHOVQ96L33 236 aa6.29□□□□□ -1.4
TCN1-202ENST00000529251 FBXL18Q96ME1 805 aa6.29□□□□□ -1.4
TCN1-202ENST00000529251 TMEM74Q96NL1 305 aa6.29□□□□□ -1.4
TCN1-202ENST00000529251 NOC4LQ9BVI4 516 aaKnown RBP6.29□□□□□ -1.4
TCN1-202ENST00000529251 DUSP23Q9BVJ7 150 aa6.29□□□□□ -1.4
TCN1-202ENST00000529251 PAK6Q9NQU5 681 aaPredicted RBP6.29□□□□□ -1.4
TCN1-202ENST00000529251 METTL5Q9NRN9 209 aaKnown RBP6.29□□□□□ -1.4
TCN1-202ENST00000529251 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.29□□□□□ -1.4
TCN1-202ENST00000529251 LEFTY1O75610 366 aa6.28□□□□□ -1.4
TCN1-202ENST00000529251 F13A1P00488 732 aa6.28□□□□□ -1.4
TCN1-202ENST00000529251 CRKP46108 304 aa6.28□□□□□ -1.4
TCN1-202ENST00000529251 INPP5AQ14642 412 aa6.28□□□□□ -1.4
TCN1-202ENST00000529251 PPM1JQ5JR12 505 aa6.28□□□□□ -1.4
TCN1-202ENST00000529251 SCARA3Q6AZY7 606 aa6.28□□□□□ -1.4
TCN1-202ENST00000529251 LLGL2Q6P1M3 1020 aa6.28□□□□□ -1.4
TCN1-202ENST00000529251 GOLM1Q8NBJ4 401 aa6.28□□□□□ -1.4
TCN1-202ENST00000529251 EAF1Q96JC9 268 aaPredicted RBP6.28□□□□□ -1.4
TCN1-202ENST00000529251 RSRP1Q9BUV0 290 aa6.28□□□□□ -1.4
TCN1-202ENST00000529251 BCL11AQ9H165 835 aa6.28□□□□□ -1.4
TCN1-202ENST00000529251 SAMM50Q9Y512 469 aa6.28□□□□□ -1.4
TCN1-202ENST00000529251 DCDC2CA8MYV0 355 aa6.27□□□□□ -1.41
TCN1-202ENST00000529251 EIF4A3P38919 411 aaKnown RBP6.27□□□□□ -1.41
TCN1-202ENST00000529251 PAK2Q13177 524 aa6.27□□□□□ -1.41
TCN1-202ENST00000529251 UBE3DQ7Z6J8 389 aa6.27□□□□□ -1.41
TCN1-202ENST00000529251 FAM181AQ8N9Y4 354 aa6.27□□□□□ -1.41
TCN1-202ENST00000529251 ZNF296Q8WUU4 475 aaPredicted RBP6.27□□□□□ -1.41
TCN1-202ENST00000529251 BCL7CQ8WUZ0 217 aaPredicted RBP6.27□□□□□ -1.41
TCN1-202ENST00000529251 FMNL2Q96PY5 1086 aa6.27□□□□□ -1.41
TCN1-202ENST00000529251 CAPN10Q9HC96 672 aa6.27□□□□□ -1.41
TCN1-202ENST00000529251 UBP1Q9NZI7 540 aa6.27□□□□□ -1.41
TCN1-202ENST00000529251 CYP8B1Q9UNU6 501 aa6.27□□□□□ -1.41
TCN1-202ENST00000529251 LRRC14Q15048 493 aa6.26□□□□□ -1.41
TCN1-202ENST00000529251 SPRED2Q7Z698 418 aa6.26□□□□□ -1.41
TCN1-202ENST00000529251 C12orf40Q86WS4 652 aa6.26□□□□□ -1.41
TCN1-202ENST00000529251 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.26□□□□□ -1.41
TCN1-202ENST00000529251 PLD6Q8N2A8 252 aaKnown RBP6.26□□□□□ -1.41
TCN1-202ENST00000529251 FLCNQ8NFG4 579 aa6.26□□□□□ -1.41
TCN1-202ENST00000529251 PCDHA4Q9UN74 947 aa6.26□□□□□ -1.41
TCN1-202ENST00000529251 PAX4O43316 350 aa6.25□□□□□ -1.41
TCN1-202ENST00000529251 GRIN3BO60391 1043 aa6.25□□□□□ -1.41
TCN1-202ENST00000529251 SNAP47Q5SQN1 464 aa6.25□□□□□ -1.41
TCN1-202ENST00000529251 ZBTB37Q5TC79 503 aa6.25□□□□□ -1.41
TCN1-202ENST00000529251 LRFN4Q6PJG9 635 aa6.25□□□□□ -1.41
TCN1-202ENST00000529251 ZNF574Q6ZN55 896 aaPredicted RBP6.25□□□□□ -1.41
TCN1-202ENST00000529251 FAM214BQ7L5A3 538 aa6.25□□□□□ -1.41
TCN1-202ENST00000529251 KRTAP19-1Q8IUB9 90 aa6.25□□□□□ -1.41
TCN1-202ENST00000529251 TP53INP2Q8IXH6 220 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms