RNA–Protein interactions for RNA: ENST00000529210.1

COPB1-206, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-206ENST00000529210 ATAD5Q96QE3 1844 aa14.69□□□□□ -0.06
COPB1-206ENST00000529210 MAP3K12Q12852 859 aa14.69□□□□□ -0.06
COPB1-206ENST00000529210 ANTXR1Q9H6X2 564 aa14.69□□□□□ -0.06
COPB1-206ENST00000529210 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.69□□□□□ -0.06
COPB1-206ENST00000529210 SLC45A1Q9Y2W3 748 aa14.69□□□□□ -0.06
COPB1-206ENST00000529210 IDH1O75874 414 aaKnown RBP14.68□□□□□ -0.06
COPB1-206ENST00000529210 IFIT2P09913 472 aaKnown RBP14.68□□□□□ -0.06
COPB1-206ENST00000529210 SLURP2P0DP57 97 aa14.68□□□□□ -0.06
COPB1-206ENST00000529210 CYP7A1P22680 504 aa14.68□□□□□ -0.06
COPB1-206ENST00000529210 ARHGEF6Q15052 776 aa14.68□□□□□ -0.06
COPB1-206ENST00000529210 C17orf99Q6UX52 265 aa14.68□□□□□ -0.06
COPB1-206ENST00000529210 FASTKD5Q7L8L6 764 aaKnown RBP14.68□□□□□ -0.06
COPB1-206ENST00000529210 CD99L2Q8TCZ2 262 aa14.68□□□□□ -0.06
COPB1-206ENST00000529210 TGFBRAP1Q8WUH2 860 aa14.68□□□□□ -0.06
COPB1-206ENST00000529210 EFCC1Q9HA90 598 aa14.68□□□□□ -0.06
COPB1-206ENST00000529210 GINM1Q9NU53 330 aa14.68□□□□□ -0.06
COPB1-206ENST00000529210 TRIM17Q9Y577 477 aa14.68□□□□□ -0.06
COPB1-206ENST00000529210 ZHX2Q9Y6X8 837 aa14.68□□□□□ -0.06
COPB1-206ENST00000529210 DDX60LQ5H9U9 1706 aaKnown RBP14.67□□□□□ -0.06
COPB1-206ENST00000529210 PDHXO00330 501 aa14.67□□□□□ -0.06
COPB1-206ENST00000529210 CAP2P40123 477 aa14.67□□□□□ -0.06
COPB1-206ENST00000529210 CAP1Q01518 475 aa14.67□□□□□ -0.06
COPB1-206ENST00000529210 GPAT2Q6NUI2 795 aa14.67□□□□□ -0.06
COPB1-206ENST00000529210 FOXP4Q8IVH2 680 aaPredicted RBP14.67□□□□□ -0.06
COPB1-206ENST00000529210 MAGEB6Q8N7X4 407 aa14.67□□□□□ -0.06
COPB1-206ENST00000529210 PTPN22Q9Y2R2 807 aa14.67□□□□□ -0.06
COPB1-206ENST00000529210 NDUFB9Q9Y6M9 179 aa14.67□□□□□ -0.06
COPB1-206ENST00000529210 LOC285556D6RIA3 1793 aa14.67□□□□□ -0.06
COPB1-206ENST00000529210 MYH1P12882 1939 aa14.66□□□□□ -0.06
COPB1-206ENST00000529210 GNRH1P01148 92 aa14.66□□□□□ -0.06
COPB1-206ENST00000529210 ATP5JP18859 108 aa14.66□□□□□ -0.06
COPB1-206ENST00000529210 RIOK1Q9BRS2 568 aaKnown RBP14.66□□□□□ -0.06
COPB1-206ENST00000529210 LRRCC1Q9C099 1032 aa14.66□□□□□ -0.06
COPB1-206ENST00000529210 DCTPP1Q9H773 170 aa14.66□□□□□ -0.06
COPB1-206ENST00000529210 DNAJC18Q9H819 358 aa14.66□□□□□ -0.06
COPB1-206ENST00000529210 CENPFP49454 3210 aa14.65□□□□□ -0.06
COPB1-206ENST00000529210 DYNLL1P63167 89 aaKnown RBP14.65□□□□□ -0.06
COPB1-206ENST00000529210 LACTBP83111 547 aaPredicted RBP14.65□□□□□ -0.06
COPB1-206ENST00000529210 MLLT1Q03111 559 aaPredicted RBP14.65□□□□□ -0.06
COPB1-206ENST00000529210 MAPKAPK5Q8IW41 473 aa14.65□□□□□ -0.06
COPB1-206ENST00000529210 PROCA1Q8NCQ7 364 aaPredicted RBP14.65□□□□□ -0.06
COPB1-206ENST00000529210 ARMC5Q96C12 935 aa14.65□□□□□ -0.06
COPB1-206ENST00000529210 PARK7Q99497 189 aaKnown RBP14.65□□□□□ -0.06
COPB1-206ENST00000529210 EHD4Q9H223 541 aa14.65□□□□□ -0.06
COPB1-206ENST00000529210 RBBP6Q7Z6E9 1792 aaKnown RBP14.65□□□□□ -0.06
COPB1-206ENST00000529210 TCRBV5S4A2TA0A5A2 114 aa14.64□□□□□ -0.07
COPB1-206ENST00000529210 FAM196BA6NMK8 535 aa14.64□□□□□ -0.07
COPB1-206ENST00000529210 USP17L5A8MUK1 530 aa14.64□□□□□ -0.07
COPB1-206ENST00000529210 HLA-DOAP06340 250 aa14.64□□□□□ -0.07
COPB1-206ENST00000529210 BCRP11274 1271 aa14.64□□□□□ -0.07
COPB1-206ENST00000529210 PDE6AP16499 860 aa14.64□□□□□ -0.07
COPB1-206ENST00000529210 PRMT2P55345 433 aa14.64□□□□□ -0.07
COPB1-206ENST00000529210 RRP1BQ14684 758 aaKnown RBP14.64□□□□□ -0.07
COPB1-206ENST00000529210 SH3D19Q5HYK7 790 aa14.64□□□□□ -0.07
COPB1-206ENST00000529210 ZNF280CQ8ND82 737 aa14.64□□□□□ -0.07
COPB1-206ENST00000529210 HAUS7Q99871 368 aa14.64□□□□□ -0.07
COPB1-206ENST00000529210 WDR18Q9BV38 432 aa14.64□□□□□ -0.07
COPB1-206ENST00000529210 TAOK2Q9UL54 1235 aa14.64□□□□□ -0.07
COPB1-206ENST00000529210 PALD1Q9ULE6 856 aa14.64□□□□□ -0.07
COPB1-206ENST00000529210 TNRC18O15417 2968 aaPredicted RBP14.63□□□□□ -0.07
COPB1-206ENST00000529210 MYH7P12883 1935 aa14.63□□□□□ -0.07
COPB1-206ENST00000529210 APBB1O00213 710 aa14.63□□□□□ -0.07
COPB1-206ENST00000529210 ASNSP08243 561 aa14.63□□□□□ -0.07
COPB1-206ENST00000529210 RRP1P56182 461 aaKnown RBP14.63□□□□□ -0.07
COPB1-206ENST00000529210 KIF22Q14807 665 aa14.63□□□□□ -0.07
COPB1-206ENST00000529210 SLC9C2Q5TAH2 1124 aa14.63□□□□□ -0.07
COPB1-206ENST00000529210 MIGA1Q8NAN2 632 aa14.63□□□□□ -0.07
COPB1-206ENST00000529210 AS3MTQ9HBK9 375 aa14.63□□□□□ -0.07
COPB1-206ENST00000529210 PAG1Q9NWQ8 432 aa14.63□□□□□ -0.07
COPB1-206ENST00000529210 AGTPBP1Q9UPW5 1226 aa14.63□□□□□ -0.07
COPB1-206ENST00000529210 GOLIM4O00461 696 aa14.62□□□□□ -0.07
COPB1-206ENST00000529210 TATDN1Q6P1N9 297 aa14.62□□□□□ -0.07
COPB1-206ENST00000529210 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.62□□□□□ -0.07
COPB1-206ENST00000529210 ZNF532Q9HCE3 1301 aa14.62□□□□□ -0.07
COPB1-206ENST00000529210 ZSWIM8A7E2V4 1837 aa14.62□□□□□ -0.07
COPB1-206ENST00000529210 NAV1Q8NEY1 1877 aa14.61□□□□□ -0.07
COPB1-206ENST00000529210 MAGEB6P1A0A0J9YX57 407 aa14.61□□□□□ -0.07
COPB1-206ENST00000529210 TRIM75PA6NK02 468 aa14.61□□□□□ -0.07
COPB1-206ENST00000529210 ADD2P35612 726 aa14.61□□□□□ -0.07
COPB1-206ENST00000529210 USP5P45974 858 aa14.61□□□□□ -0.07
COPB1-206ENST00000529210 SPP2Q13103 211 aa14.61□□□□□ -0.07
COPB1-206ENST00000529210 TTC6Q86TZ1 520 aa14.61□□□□□ -0.07
COPB1-206ENST00000529210 DNAJC2Q99543 621 aaKnown RBP14.61□□□□□ -0.07
COPB1-206ENST00000529210 BOLA2Q9H3K6 86 aa14.61□□□□□ -0.07
COPB1-206ENST00000529210 SERPINB13Q9UIV8 391 aa14.61□□□□□ -0.07
COPB1-206ENST00000529210 BRCA2P51587 3418 aa14.61□□□□□ -0.07
COPB1-206ENST00000529210 MGAMO43451 1857 aa14.61□□□□□ -0.07
COPB1-206ENST00000529210 SOX10P56693 466 aa14.6□□□□□ -0.07
COPB1-206ENST00000529210 BACE1P56817 501 aa14.6□□□□□ -0.07
COPB1-206ENST00000529210 GABPAQ06546 454 aa14.6□□□□□ -0.07
COPB1-206ENST00000529210 UBE3CQ15386 1083 aa14.6□□□□□ -0.07
COPB1-206ENST00000529210 GADL1Q6ZQY3 521 aa14.6□□□□□ -0.07
COPB1-206ENST00000529210 CCDC84Q86UT8 332 aaPredicted RBP14.6□□□□□ -0.07
COPB1-206ENST00000529210 CRACR2BQ8N4Y2 399 aaPredicted RBP14.6□□□□□ -0.07
COPB1-206ENST00000529210 TRIM34Q9BYJ4 488 aa14.6□□□□□ -0.07
COPB1-206ENST00000529210 CRNKL1Q9BZJ0 848 aaKnown RBP14.6□□□□□ -0.07
COPB1-206ENST00000529210 ARHGAP39Q9C0H5 1083 aa14.6□□□□□ -0.07
COPB1-206ENST00000529210 CPA4Q9UI42 421 aa14.6□□□□□ -0.07
COPB1-206ENST00000529210 PNMA3Q9UL41 463 aa14.6□□□□□ -0.07
COPB1-206ENST00000529210 PCDHB15Q9Y5E8 787 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms