RNA–Protein interactions for RNA: ENST00000528966.5

LTBP3-211, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 4

Gene LTBP3, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-211ENST00000528966 ATG9AQ7Z3C6 839 aa22.22■■□□□ 1.15
LTBP3-211ENST00000528966 CDH23Q9H251 3354 aa22.22■■□□□ 1.15
LTBP3-211ENST00000528966 PRKAR2AP13861 404 aaKnown RBP22.21■■□□□ 1.15
LTBP3-211ENST00000528966 SPP2Q13103 211 aa22.21■■□□□ 1.15
LTBP3-211ENST00000528966 LRRC26Q2I0M4 334 aa22.21■■□□□ 1.15
LTBP3-211ENST00000528966 ASCC2Q9H1I8 757 aaPredicted RBP22.21■■□□□ 1.15
LTBP3-211ENST00000528966 FAM196BA6NMK8 535 aa22.2■■□□□ 1.14
LTBP3-211ENST00000528966 PHKA1P46020 1223 aa22.2■■□□□ 1.14
LTBP3-211ENST00000528966 PICALMQ13492 652 aa22.2■■□□□ 1.14
LTBP3-211ENST00000528966 FAM161BQ96MY7 647 aa22.2■■□□□ 1.14
LTBP3-211ENST00000528966 CYP2B6P20813 491 aa22.19■■□□□ 1.14
LTBP3-211ENST00000528966 HMGCS2P54868 508 aa22.19■■□□□ 1.14
LTBP3-211ENST00000528966 USP44Q9H0E7 712 aa22.19■■□□□ 1.14
LTBP3-211ENST00000528966 GNL3LQ9NVN8 582 aaKnown RBP22.19■■□□□ 1.14
LTBP3-211ENST00000528966 MORF4L1Q9UBU8 362 aa22.19■■□□□ 1.14
LTBP3-211ENST00000528966 DENND2AQ9ULE3 1009 aa22.19■■□□□ 1.14
LTBP3-211ENST00000528966 FRMPD3Q5JV73 1810 aa22.18■■□□□ 1.14
LTBP3-211ENST00000528966 TBC1D12O60347 775 aa22.18■■□□□ 1.14
LTBP3-211ENST00000528966 ATP2B3Q16720 1220 aa22.18■■□□□ 1.14
LTBP3-211ENST00000528966 ZNF280CQ8ND82 737 aa22.18■■□□□ 1.14
LTBP3-211ENST00000528966 MAST2Q6P0Q8 1798 aa22.17■■□□□ 1.14
LTBP3-211ENST00000528966 SEMA3EO15041 775 aa22.17■■□□□ 1.14
LTBP3-211ENST00000528966 MUC3AQ02505 3323 aa22.17■■□□□ 1.14
LTBP3-211ENST00000528966 PEX10O60683 326 aa22.16■■□□□ 1.14
LTBP3-211ENST00000528966 BTDP43251 543 aa22.16■■□□□ 1.14
LTBP3-211ENST00000528966 CACNB2Q08289 660 aaPredicted RBP22.16■■□□□ 1.14
LTBP3-211ENST00000528966 PABPC4Q13310 644 aaKnown RBP eCLIP22.16■■□□□ 1.14
LTBP3-211ENST00000528966 LHX8Q68G74 356 aa22.16■■□□□ 1.14
LTBP3-211ENST00000528966 FAM163AQ96GL9 167 aaPredicted RBP22.16■■□□□ 1.14
LTBP3-211ENST00000528966 OSBPL5Q9H0X9 879 aaPredicted RBP22.16■■□□□ 1.14
LTBP3-211ENST00000528966 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.16■■□□□ 1.14
LTBP3-211ENST00000528966 XRCC5P13010 732 aaKnown RBP22.15■■□□□ 1.14
LTBP3-211ENST00000528966 RHBDL3P58872 404 aa22.15■■□□□ 1.14
LTBP3-211ENST00000528966 RRP1BQ14684 758 aaKnown RBP22.15■■□□□ 1.14
LTBP3-211ENST00000528966 SH3D19Q5HYK7 790 aa22.15■■□□□ 1.14
LTBP3-211ENST00000528966 DZIP1Q86YF9 867 aaKnown RBP22.15■■□□□ 1.14
LTBP3-211ENST00000528966 CCND3P30281 292 aaPredicted RBP22.14■■□□□ 1.13
LTBP3-211ENST00000528966 ZGPATQ8N5A5 531 aaKnown RBP22.14■■□□□ 1.13
LTBP3-211ENST00000528966 SOCS4Q8WXH5 440 aa22.14■■□□□ 1.13
LTBP3-211ENST00000528966 NUDT12Q9BQG2 462 aa22.14■■□□□ 1.13
LTBP3-211ENST00000528966 SIL1Q9H173 461 aa22.14■■□□□ 1.13
LTBP3-211ENST00000528966 TXNRD2Q9NNW7 524 aa22.14■■□□□ 1.13
LTBP3-211ENST00000528966 MROH7-TTC4A0A0A0MT08 1334 aa22.13■■□□□ 1.13
LTBP3-211ENST00000528966 ZBTB22O15209 634 aa22.13■■□□□ 1.13
LTBP3-211ENST00000528966 ADORA1P30542 326 aa22.13■■□□□ 1.13
LTBP3-211ENST00000528966 CAP2P40123 477 aa22.13■■□□□ 1.13
LTBP3-211ENST00000528966 RASGRF1Q13972 1273 aa22.13■■□□□ 1.13
LTBP3-211ENST00000528966 TBC1D2Q9BYX2 928 aa22.13■■□□□ 1.13
LTBP3-211ENST00000528966 PRDM6Q9NQX0 595 aa22.13■■□□□ 1.13
LTBP3-211ENST00000528966 ABCF2Q9UG63 623 aa22.13■■□□□ 1.13
LTBP3-211ENST00000528966 LTBP2Q14767 1821 aa22.13■■□□□ 1.13
LTBP3-211ENST00000528966 ZKSCAN1P17029 563 aaPredicted RBP22.12■■□□□ 1.13
LTBP3-211ENST00000528966 CCL14Q16627 93 aa22.12■■□□□ 1.13
LTBP3-211ENST00000528966 ZNF697Q5TEC3 545 aa22.12■■□□□ 1.13
LTBP3-211ENST00000528966 CCDC102BQ68D86 513 aa22.12■■□□□ 1.13
LTBP3-211ENST00000528966 SLF2Q8IX21 1173 aa22.12■■□□□ 1.13
LTBP3-211ENST00000528966 ZNF384Q8TF68 577 aa22.12■■□□□ 1.13
LTBP3-211ENST00000528966 USP6NLQ92738 828 aa22.12■■□□□ 1.13
LTBP3-211ENST00000528966 CEP126Q9P2H0 1117 aa22.12■■□□□ 1.13
LTBP3-211ENST00000528966 GPR75-ASB3A0A0A6YYF3 556 aa22.11■■□□□ 1.13
LTBP3-211ENST00000528966 USP17L5A8MUK1 530 aa22.11■■□□□ 1.13
LTBP3-211ENST00000528966 NPM3O75607 178 aaKnown RBP22.11■■□□□ 1.13
LTBP3-211ENST00000528966 CIAO1O76071 339 aa22.11■■□□□ 1.13
LTBP3-211ENST00000528966 MRPL50Q8N5N7 158 aaKnown RBP22.11■■□□□ 1.13
LTBP3-211ENST00000528966 P2RX7Q99572 595 aaKnown RBP22.11■■□□□ 1.13
LTBP3-211ENST00000528966 CDX2Q99626 313 aaPredicted RBP22.11■■□□□ 1.13
LTBP3-211ENST00000528966 SIPA1L1O43166 1804 aa22.1■■□□□ 1.13
LTBP3-211ENST00000528966 IRX3P78415 501 aaPredicted RBP22.1■■□□□ 1.13
LTBP3-211ENST00000528966 TRMT44Q8IYL2 757 aaKnown RBP22.1■■□□□ 1.13
LTBP3-211ENST00000528966 LBHD1Q9BQE6 289 aaPredicted RBP22.1■■□□□ 1.13
LTBP3-211ENST00000528966 FBXO3Q9UK99 471 aa22.1■■□□□ 1.13
LTBP3-211ENST00000528966 PDS5AQ29RF7 1337 aaKnown RBP22.09■■□□□ 1.13
LTBP3-211ENST00000528966 HOXA7P31268 230 aaPredicted RBP22.09■■□□□ 1.13
LTBP3-211ENST00000528966 HERVK_113P62684 666 aa22.09■■□□□ 1.13
LTBP3-211ENST00000528966 MECOMQ03112 1051 aa22.09■■□□□ 1.13
LTBP3-211ENST00000528966 MTMR2Q13614 643 aa22.09■■□□□ 1.13
LTBP3-211ENST00000528966 GPRC5AQ8NFJ5 357 aa22.09■■□□□ 1.13
LTBP3-211ENST00000528966 MAFAQ8NHW3 353 aaPredicted RBP22.09■■□□□ 1.13
LTBP3-211ENST00000528966 PORCNQ9H237 461 aa22.09■■□□□ 1.13
LTBP3-211ENST00000528966 PTPRCP08575 1304 aa22.08■■□□□ 1.13
LTBP3-211ENST00000528966 PDE3AQ14432 1141 aa22.08■■□□□ 1.13
LTBP3-211ENST00000528966 MORN1Q5T089 497 aa22.08■■□□□ 1.13
LTBP3-211ENST00000528966 RBPJLQ9UBG7 517 aa22.08■■□□□ 1.13
LTBP3-211ENST00000528966 MAPK4P31152 587 aa22.07■■□□□ 1.12
LTBP3-211ENST00000528966 BACE1P56817 501 aa22.07■■□□□ 1.12
LTBP3-211ENST00000528966 Q3C1V9 767 aa22.07■■□□□ 1.12
LTBP3-211ENST00000528966 SPTY2D1Q68D10 685 aaPredicted RBP22.07■■□□□ 1.12
LTBP3-211ENST00000528966 POTEEQ6S8J3 1075 aa22.07■■□□□ 1.12
LTBP3-211ENST00000528966 WDR18Q9BV38 432 aa22.07■■□□□ 1.12
LTBP3-211ENST00000528966 SENP6Q9GZR1 1112 aaPredicted RBP22.07■■□□□ 1.12
LTBP3-211ENST00000528966 AS3MTQ9HBK9 375 aa22.07■■□□□ 1.12
LTBP3-211ENST00000528966 RGS2P41220 211 aa22.06■■□□□ 1.12
LTBP3-211ENST00000528966 ERVK-9P63128 1117 aa22.06■■□□□ 1.12
LTBP3-211ENST00000528966 ERVK-24P63145 666 aa22.06■■□□□ 1.12
LTBP3-211ENST00000528966 GPR142Q7Z601 462 aa22.06■■□□□ 1.12
LTBP3-211ENST00000528966 APBA2Q99767 749 aa22.06■■□□□ 1.12
LTBP3-211ENST00000528966 IL15P40933 162 aaPredicted RBP22.05■■□□□ 1.12
LTBP3-211ENST00000528966 JAG1P78504 1218 aa22.05■■□□□ 1.12
LTBP3-211ENST00000528966 SEMA6BQ9H3T3 888 aa22.05■■□□□ 1.12
LTBP3-211ENST00000528966 TMOD4Q9NZQ9 345 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms