RNA–Protein interactions for RNA: ENST00000528789.1

CHRDL2-206, Transcript of chordin like 2, humanhuman

TSL 1 (best)

Gene CHRDL2, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-206ENST00000528789 SIPA1L1O43166 1804 aa21.01■□□□□ 0.95
CHRDL2-206ENST00000528789 NAV1Q8NEY1 1877 aa21.01■□□□□ 0.95
CHRDL2-206ENST00000528789 TBC1D12O60347 775 aa21.01■□□□□ 0.95
CHRDL2-206ENST00000528789 HLA-DOAP06340 250 aa21.01■□□□□ 0.95
CHRDL2-206ENST00000528789 OTUD5Q96G74 571 aa21.01■□□□□ 0.95
CHRDL2-206ENST00000528789 SEC62Q99442 399 aaKnown RBP21.01■□□□□ 0.95
CHRDL2-206ENST00000528789 MYH1P12882 1939 aa21.01■□□□□ 0.95
CHRDL2-206ENST00000528789 CENPQQ7L2Z9 268 aaPredicted RBP21■□□□□ 0.95
CHRDL2-206ENST00000528789 CRACR2BQ8N4Y2 399 aaPredicted RBP21■□□□□ 0.95
CHRDL2-206ENST00000528789 STRBPQ96SI9 672 aaKnown RBP21■□□□□ 0.95
CHRDL2-206ENST00000528789 TRIM34Q9BYJ4 488 aa21■□□□□ 0.95
CHRDL2-206ENST00000528789 DCP1AQ9NPI6 582 aaPredicted RBP21■□□□□ 0.95
CHRDL2-206ENST00000528789 MCM9Q9NXL9 1143 aa21■□□□□ 0.95
CHRDL2-206ENST00000528789 SPDYE5A6NIY4 337 aa20.99■□□□□ 0.95
CHRDL2-206ENST00000528789 GPAA1O43292 621 aa20.99■□□□□ 0.95
CHRDL2-206ENST00000528789 POLR3DP05423 398 aaPredicted RBP20.99■□□□□ 0.95
CHRDL2-206ENST00000528789 ZBTB48P10074 688 aaPredicted RBP20.99■□□□□ 0.95
CHRDL2-206ENST00000528789 CYP2D6P10635 497 aa20.99■□□□□ 0.95
CHRDL2-206ENST00000528789 EVX2Q03828 476 aa20.99■□□□□ 0.95
CHRDL2-206ENST00000528789 RRP1BQ14684 758 aaKnown RBP20.99■□□□□ 0.95
CHRDL2-206ENST00000528789 ZMYM1Q5SVZ6 1142 aa20.99■□□□□ 0.95
CHRDL2-206ENST00000528789 NOL9Q5SY16 702 aaKnown RBP20.99■□□□□ 0.95
CHRDL2-206ENST00000528789 CCDC136Q96JN2 1154 aa20.99■□□□□ 0.95
CHRDL2-206ENST00000528789 DNAJC18Q9H819 358 aa20.99■□□□□ 0.95
CHRDL2-206ENST00000528789 HERC5Q9UII4 1024 aaKnown RBP20.99■□□□□ 0.95
CHRDL2-206ENST00000528789 PLCD1P51178 756 aa20.98■□□□□ 0.95
CHRDL2-206ENST00000528789 TTC6Q86TZ1 520 aa20.98■□□□□ 0.95
CHRDL2-206ENST00000528789 ERO1BQ86YB8 467 aa20.98■□□□□ 0.95
CHRDL2-206ENST00000528789 FOXP4Q8IVH2 680 aaPredicted RBP20.98■□□□□ 0.95
CHRDL2-206ENST00000528789 SCYL3Q8IZE3 742 aa20.98■□□□□ 0.95
CHRDL2-206ENST00000528789 BEGAINQ9BUH8 593 aa20.98■□□□□ 0.95
CHRDL2-206ENST00000528789 ATP8A2Q9NTI2 1148 aa20.98■□□□□ 0.95
CHRDL2-206ENST00000528789 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.98■□□□□ 0.95
CHRDL2-206ENST00000528789 DDX60LQ5H9U9 1706 aaKnown RBP20.98■□□□□ 0.95
CHRDL2-206ENST00000528789 FOXN1O15353 648 aa20.97■□□□□ 0.95
CHRDL2-206ENST00000528789 CCDC129Q6ZRS4 1044 aa20.97■□□□□ 0.95
CHRDL2-206ENST00000528789 SKAP1Q86WV1 359 aa20.97■□□□□ 0.95
CHRDL2-206ENST00000528789 PICK1Q9NRD5 415 aa20.97■□□□□ 0.95
CHRDL2-206ENST00000528789 TSKSQ9UJT2 592 aa20.97■□□□□ 0.95
CHRDL2-206ENST00000528789 CTNND1O60716 968 aaKnown RBP20.96■□□□□ 0.95
CHRDL2-206ENST00000528789 TTC22Q5TAA0 569 aa20.96■□□□□ 0.95
CHRDL2-206ENST00000528789 CCDC84Q86UT8 332 aaPredicted RBP20.96■□□□□ 0.95
CHRDL2-206ENST00000528789 METTL16Q86W50 562 aaKnown RBP20.96■□□□□ 0.95
CHRDL2-206ENST00000528789 FAM227BQ96M60 508 aa20.96■□□□□ 0.95
CHRDL2-206ENST00000528789 CYP2D7A0A087X1C5 515 aa20.95■□□□□ 0.94
CHRDL2-206ENST00000528789 MANSC4A6NHS7 340 aaPredicted RBP20.95■□□□□ 0.94
CHRDL2-206ENST00000528789 IRF6O14896 467 aa20.95■□□□□ 0.94
CHRDL2-206ENST00000528789 GSPT1P15170 499 aaKnown RBP20.95■□□□□ 0.94
CHRDL2-206ENST00000528789 SREBF2Q12772 1141 aa20.95■□□□□ 0.94
CHRDL2-206ENST00000528789 PPIL2Q13356 520 aa20.95■□□□□ 0.94
CHRDL2-206ENST00000528789 DDRGK1Q96HY6 314 aa20.95■□□□□ 0.94
CHRDL2-206ENST00000528789 SERPINB13Q9UIV8 391 aa20.95■□□□□ 0.94
CHRDL2-206ENST00000528789 BAZ2AQ9UIF9 1905 aaKnown RBP20.95■□□□□ 0.94
CHRDL2-206ENST00000528789 A0A0D9SFI3 127 aa20.94■□□□□ 0.94
CHRDL2-206ENST00000528789 GSG1L2A8MUP6 293 aa20.94■□□□□ 0.94
CHRDL2-206ENST00000528789 USP17L12C9JPN9 530 aa20.94■□□□□ 0.94
CHRDL2-206ENST00000528789 USP17L21D6R901 530 aa20.94■□□□□ 0.94
CHRDL2-206ENST00000528789 SMIM22K7EJ46 135 aa20.94■□□□□ 0.94
CHRDL2-206ENST00000528789 GDF11O95390 407 aa20.94■□□□□ 0.94
CHRDL2-206ENST00000528789 PTPRAP18433 802 aa20.94■□□□□ 0.94
CHRDL2-206ENST00000528789 CAP2P40123 477 aa20.94■□□□□ 0.94
CHRDL2-206ENST00000528789 TM4SF4P48230 202 aa20.94■□□□□ 0.94
CHRDL2-206ENST00000528789 PPATQ06203 517 aa20.94■□□□□ 0.94
CHRDL2-206ENST00000528789 NMIQ13287 307 aaPredicted RBP20.94■□□□□ 0.94
CHRDL2-206ENST00000528789 SHROOM1Q2M3G4 852 aaPredicted RBP20.94■□□□□ 0.94
CHRDL2-206ENST00000528789 REM2Q8IYK8 340 aaPredicted RBP20.94■□□□□ 0.94
CHRDL2-206ENST00000528789 EHD4Q9H223 541 aa20.94■□□□□ 0.94
CHRDL2-206ENST00000528789 RNF186Q9NXI6 227 aa20.94■□□□□ 0.94
CHRDL2-206ENST00000528789 DOCK1Q14185 1865 aa20.94■□□□□ 0.94
CHRDL2-206ENST00000528789 APPP05067 770 aa20.93■□□□□ 0.94
CHRDL2-206ENST00000528789 SDSP20132 328 aa20.93■□□□□ 0.94
CHRDL2-206ENST00000528789 JAG1P78504 1218 aa20.93■□□□□ 0.94
CHRDL2-206ENST00000528789 DYNLL2Q96FJ2 89 aa20.93■□□□□ 0.94
CHRDL2-206ENST00000528789 MS4A4AQ96JQ5 239 aa20.93■□□□□ 0.94
CHRDL2-206ENST00000528789 EPB41L4AQ9HCS5 686 aaPredicted RBP20.93■□□□□ 0.94
CHRDL2-206ENST00000528789 ZHX2Q9Y6X8 837 aa20.93■□□□□ 0.94
CHRDL2-206ENST00000528789 CCL15-CCL14A0A0B4J2E2 113 aa20.92■□□□□ 0.94
CHRDL2-206ENST00000528789 TRPA1O75762 1119 aa20.92■□□□□ 0.94
CHRDL2-206ENST00000528789 GNAT2P19087 354 aa20.92■□□□□ 0.94
CHRDL2-206ENST00000528789 GTF2A2P52657 109 aa20.92■□□□□ 0.94
CHRDL2-206ENST00000528789 CCL15Q16663 113 aa20.92■□□□□ 0.94
CHRDL2-206ENST00000528789 CTR9Q6PD62 1173 aa20.92■□□□□ 0.94
CHRDL2-206ENST00000528789 AMOTL1Q8IY63 956 aa20.92■□□□□ 0.94
CHRDL2-206ENST00000528789 SLC44A5Q8NCS7 719 aa20.92■□□□□ 0.94
CHRDL2-206ENST00000528789 BRI3BPQ8WY22 251 aa20.92■□□□□ 0.94
CHRDL2-206ENST00000528789 HELLSQ9NRZ9 838 aa20.92■□□□□ 0.94
CHRDL2-206ENST00000528789 PATL2C9JE40 543 aaKnown RBP20.91■□□□□ 0.94
CHRDL2-206ENST00000528789 IGF2BP3O00425 579 aaKnown RBP eCLIP20.91■□□□□ 0.94
CHRDL2-206ENST00000528789 HSPA8P11142 646 aaKnown RBP20.91■□□□□ 0.94
CHRDL2-206ENST00000528789 SHMT1P34896 483 aa20.91■□□□□ 0.94
CHRDL2-206ENST00000528789 TDO2P48775 406 aa20.91■□□□□ 0.94
CHRDL2-206ENST00000528789 GABPAQ06546 454 aa20.91■□□□□ 0.94
CHRDL2-206ENST00000528789 SNAPC2Q13487 334 aa20.91■□□□□ 0.94
CHRDL2-206ENST00000528789 C12orf60Q5U649 245 aa20.91■□□□□ 0.94
CHRDL2-206ENST00000528789 ATAD5Q96QE3 1844 aa20.9■□□□□ 0.94
CHRDL2-206ENST00000528789 CTCFP49711 727 aaPredicted RBP20.9■□□□□ 0.94
CHRDL2-206ENST00000528789 MCMDC2Q4G0Z9 681 aa20.9■□□□□ 0.94
CHRDL2-206ENST00000528789 TATDN1Q6P1N9 297 aa20.9■□□□□ 0.94
CHRDL2-206ENST00000528789 IFNL1Q8IU54 200 aa20.9■□□□□ 0.94
CHRDL2-206ENST00000528789 IFNL3Q8IZI9 196 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms