RNA–Protein interactions for RNA: ENST00000528739.5

CAPN1-216, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-216ENST00000528739 ATRNL1Q5VV63 1379 aa17.3■□□□□ 0.36
CAPN1-216ENST00000528739 OTOFQ9HC10 1997 aa17.3■□□□□ 0.36
CAPN1-216ENST00000528739 TRIM75PA6NK02 468 aa17.3■□□□□ 0.36
CAPN1-216ENST00000528739 ECM2O94769 699 aaPredicted RBP17.3■□□□□ 0.36
CAPN1-216ENST00000528739 SP3Q02447 781 aa17.3■□□□□ 0.36
CAPN1-216ENST00000528739 NOM1Q5C9Z4 860 aaKnown RBP17.3■□□□□ 0.36
CAPN1-216ENST00000528739 ERO1AQ96HE7 468 aa17.3■□□□□ 0.36
CAPN1-216ENST00000528739 HAUS7Q99871 368 aa17.3■□□□□ 0.36
CAPN1-216ENST00000528739 ECHDC1Q9NTX5 307 aa17.3■□□□□ 0.36
CAPN1-216ENST00000528739 HERC5Q9UII4 1024 aaKnown RBP17.3■□□□□ 0.36
CAPN1-216ENST00000528739 CXCL11O14625 94 aa17.29■□□□□ 0.36
CAPN1-216ENST00000528739 POLR3DP05423 398 aaPredicted RBP17.29■□□□□ 0.36
CAPN1-216ENST00000528739 MAP3K10Q02779 954 aa17.29■□□□□ 0.36
CAPN1-216ENST00000528739 TMED8Q6PL24 325 aaPredicted RBP17.29■□□□□ 0.36
CAPN1-216ENST00000528739 CCDC84Q86UT8 332 aaPredicted RBP17.29■□□□□ 0.36
CAPN1-216ENST00000528739 FOXP4Q8IVH2 680 aaPredicted RBP17.29■□□□□ 0.36
CAPN1-216ENST00000528739 CD99L2Q8TCZ2 262 aa17.29■□□□□ 0.36
CAPN1-216ENST00000528739 CRNKL1Q9BZJ0 848 aaKnown RBP17.29■□□□□ 0.36
CAPN1-216ENST00000528739 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.29■□□□□ 0.36
CAPN1-216ENST00000528739 TRIM17Q9Y577 477 aa17.29■□□□□ 0.36
CAPN1-216ENST00000528739 PDHXO00330 501 aa17.28■□□□□ 0.36
CAPN1-216ENST00000528739 PKN2Q16513 984 aaKnown RBP17.28■□□□□ 0.36
CAPN1-216ENST00000528739 ANKRD45Q5TZF3 282 aa17.28■□□□□ 0.36
CAPN1-216ENST00000528739 TSHZ3Q63HK5 1081 aa17.28■□□□□ 0.36
CAPN1-216ENST00000528739 FASTKD5Q7L8L6 764 aaKnown RBP17.28■□□□□ 0.36
CAPN1-216ENST00000528739 KCNH4Q9UQ05 1017 aa17.28■□□□□ 0.36
CAPN1-216ENST00000528739 CAP2P40123 477 aa17.27■□□□□ 0.36
CAPN1-216ENST00000528739 ZSCAN25Q6NSZ9 544 aa17.27■□□□□ 0.36
CAPN1-216ENST00000528739 ANKRD23Q86SG2 305 aa17.27■□□□□ 0.36
CAPN1-216ENST00000528739 TTC6Q86TZ1 520 aa17.27■□□□□ 0.36
CAPN1-216ENST00000528739 AFG3L2Q9Y4W6 797 aa17.27■□□□□ 0.36
CAPN1-216ENST00000528739 USP17L5A8MUK1 530 aa17.26■□□□□ 0.35
CAPN1-216ENST00000528739 GDF11O95390 407 aa17.26■□□□□ 0.35
CAPN1-216ENST00000528739 ADD2P35612 726 aa17.26■□□□□ 0.35
CAPN1-216ENST00000528739 SPP2Q13103 211 aa17.26■□□□□ 0.35
CAPN1-216ENST00000528739 KIF22Q14807 665 aa17.26■□□□□ 0.35
CAPN1-216ENST00000528739 ARHGEF6Q15052 776 aa17.26■□□□□ 0.35
CAPN1-216ENST00000528739 SLFNL1Q499Z3 407 aa17.26■□□□□ 0.35
CAPN1-216ENST00000528739 ARMT1Q9H993 441 aa17.26■□□□□ 0.35
CAPN1-216ENST00000528739 EFCC1Q9HA90 598 aa17.26■□□□□ 0.35
CAPN1-216ENST00000528739 AS3MTQ9HBK9 375 aa17.26■□□□□ 0.35
CAPN1-216ENST00000528739 ZCCHC17Q9NP64 241 aaKnown RBP17.26■□□□□ 0.35
CAPN1-216ENST00000528739 SUPT16HQ9Y5B9 1047 aaKnown RBP17.26■□□□□ 0.35
CAPN1-216ENST00000528739 MAST2Q6P0Q8 1798 aa17.25■□□□□ 0.35
CAPN1-216ENST00000528739 COL2A1P02458 1487 aaPredicted RBP17.25■□□□□ 0.35
CAPN1-216ENST00000528739 TLR2O60603 784 aa17.25■□□□□ 0.35
CAPN1-216ENST00000528739 LCORLQ8N3X6 602 aa17.25■□□□□ 0.35
CAPN1-216ENST00000528739 SDR42E1Q8WUS8 393 aa17.25■□□□□ 0.35
CAPN1-216ENST00000528739 RIOK1Q9BRS2 568 aaKnown RBP17.25■□□□□ 0.35
CAPN1-216ENST00000528739 MCM9Q9NXL9 1143 aa17.25■□□□□ 0.35
CAPN1-216ENST00000528739 CPA4Q9UI42 421 aa17.25■□□□□ 0.35
CAPN1-216ENST00000528739 DOCK2Q92608 1830 aa17.25■□□□□ 0.35
CAPN1-216ENST00000528739 A0A0G2JLL6 359 aaPredicted RBP17.24■□□□□ 0.35
CAPN1-216ENST00000528739 ERC2O15083 957 aa17.24■□□□□ 0.35
CAPN1-216ENST00000528739 MBD4O95243 580 aa17.24■□□□□ 0.35
CAPN1-216ENST00000528739 RRP1BQ14684 758 aaKnown RBP17.24■□□□□ 0.35
CAPN1-216ENST00000528739 FBXO46Q6PJ61 603 aaPredicted RBP17.24■□□□□ 0.35
CAPN1-216ENST00000528739 OTOP1Q7RTM1 612 aa17.24■□□□□ 0.35
CAPN1-216ENST00000528739 PRRT2Q7Z6L0 340 aaPredicted RBP17.24■□□□□ 0.35
CAPN1-216ENST00000528739 ZNF280CQ8ND82 737 aa17.24■□□□□ 0.35
CAPN1-216ENST00000528739 DDRGK1Q96HY6 314 aa17.24■□□□□ 0.35
CAPN1-216ENST00000528739 PARK7Q99497 189 aaKnown RBP17.24■□□□□ 0.35
CAPN1-216ENST00000528739 HPS5Q9UPZ3 1129 aa17.24■□□□□ 0.35
CAPN1-216ENST00000528739 TCRBV5S4A2TA0A5A2 114 aa17.23■□□□□ 0.35
CAPN1-216ENST00000528739 ASNSP08243 561 aa17.23■□□□□ 0.35
CAPN1-216ENST00000528739 CYP2C8P10632 490 aa17.23■□□□□ 0.35
CAPN1-216ENST00000528739 AMOTL1Q8IY63 956 aa17.23■□□□□ 0.35
CAPN1-216ENST00000528739 GCC1Q96CN9 775 aa17.23■□□□□ 0.35
CAPN1-216ENST00000528739 TBC1D2Q9BYX2 928 aa17.23■□□□□ 0.35
CAPN1-216ENST00000528739 SERPINB13Q9UIV8 391 aa17.23■□□□□ 0.35
CAPN1-216ENST00000528739 MYO5AQ9Y4I1 1855 aaKnown RBP17.22■□□□□ 0.35
CAPN1-216ENST00000528739 CHGBP05060 677 aa17.22■□□□□ 0.35
CAPN1-216ENST00000528739 UBE3CQ15386 1083 aa17.22■□□□□ 0.35
CAPN1-216ENST00000528739 GPAT2Q6NUI2 795 aa17.22■□□□□ 0.35
CAPN1-216ENST00000528739 EXOC6Q8TAG9 804 aa17.22■□□□□ 0.35
CAPN1-216ENST00000528739 SMCR8Q8TEV9 937 aaPredicted RBP17.22■□□□□ 0.35
CAPN1-216ENST00000528739 RWDD1Q9H446 243 aaPredicted RBP17.22■□□□□ 0.35
CAPN1-216ENST00000528739 DNAJC18Q9H819 358 aa17.22■□□□□ 0.35
CAPN1-216ENST00000528739 TMOD4Q9NZQ9 345 aa17.22■□□□□ 0.35
CAPN1-216ENST00000528739 MPHOSPH10O00566 681 aaKnown RBP17.21■□□□□ 0.35
CAPN1-216ENST00000528739 PRKAB2O43741 272 aa17.21■□□□□ 0.35
CAPN1-216ENST00000528739 PLCD1P51178 756 aa17.21■□□□□ 0.35
CAPN1-216ENST00000528739 HMGCS2P54868 508 aa17.21■□□□□ 0.35
CAPN1-216ENST00000528739 AAMPQ13685 434 aa17.21■□□□□ 0.35
CAPN1-216ENST00000528739 MOGSQ13724 837 aa17.21■□□□□ 0.35
CAPN1-216ENST00000528739 RAB3GAP1Q15042 981 aa17.21■□□□□ 0.35
CAPN1-216ENST00000528739 LRRFIP1Q32MZ4 808 aaKnown RBP17.21■□□□□ 0.35
CAPN1-216ENST00000528739 CERKLQ49MI3 558 aaPredicted RBP17.21■□□□□ 0.35
CAPN1-216ENST00000528739 OTUD7AQ8TE49 926 aaPredicted RBP17.21■□□□□ 0.35
CAPN1-216ENST00000528739 CABP5Q9NP86 173 aa17.21■□□□□ 0.35
CAPN1-216ENST00000528739 SLC4A4Q9Y6R1 1079 aa17.21■□□□□ 0.35
CAPN1-216ENST00000528739 TTC41PQ6P2S7 1318 aa17.21■□□□□ 0.34
CAPN1-216ENST00000528739 GLRX3O76003 335 aaKnown RBP17.2■□□□□ 0.34
CAPN1-216ENST00000528739 FMNL1O95466 1100 aaPredicted RBP17.2■□□□□ 0.34
CAPN1-216ENST00000528739 GH2P01242 217 aa17.2■□□□□ 0.34
CAPN1-216ENST00000528739 MX1P20591 662 aa17.2■□□□□ 0.34
CAPN1-216ENST00000528739 SOX10P56693 466 aa17.2■□□□□ 0.34
CAPN1-216ENST00000528739 HDAC1Q13547 482 aaPredicted RBP17.2■□□□□ 0.34
CAPN1-216ENST00000528739 MTMR2Q13614 643 aa17.2■□□□□ 0.34
CAPN1-216ENST00000528739 B4GALNT3Q6L9W6 998 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms