RNA–Protein interactions for RNA: ENST00000528414.5

PTPN22-207, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,424 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-207ENST00000528414 CCDC178Q5BJE1 867 aa4.36□□□□□ -1.71
PTPN22-207ENST00000528414 SYNE3Q6ZMZ3 975 aa4.36□□□□□ -1.71
PTPN22-207ENST00000528414 TAX1BP1Q86VP1 789 aa4.36□□□□□ -1.71
PTPN22-207ENST00000528414 LCA5Q86VQ0 697 aa4.36□□□□□ -1.71
PTPN22-207ENST00000528414 BRSK2Q8IWQ3 736 aa4.36□□□□□ -1.71
PTPN22-207ENST00000528414 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.36□□□□□ -1.71
PTPN22-207ENST00000528414 TRIML1Q8N9V2 468 aa4.36□□□□□ -1.71
PTPN22-207ENST00000528414 BTG4Q9NY30 223 aa4.36□□□□□ -1.71
PTPN22-207ENST00000528414 BIN2Q9UBW5 565 aaPredicted RBP4.36□□□□□ -1.71
PTPN22-207ENST00000528414 MRPS23Q9Y3D9 190 aaKnown RBP4.36□□□□□ -1.71
PTPN22-207ENST00000528414 PPP2R3BQ9Y5P8 575 aa4.36□□□□□ -1.71
PTPN22-207ENST00000528414 MYH3P11055 1940 aa4.36□□□□□ -1.71
PTPN22-207ENST00000528414 MYPNQ86TC9 1320 aa4.36□□□□□ -1.71
PTPN22-207ENST00000528414 ALPK3Q96L96 1907 aa4.36□□□□□ -1.71
PTPN22-207ENST00000528414 STK25O00506 426 aa4.36□□□□□ -1.71
PTPN22-207ENST00000528414 CCP110O43303 1012 aa4.36□□□□□ -1.71
PTPN22-207ENST00000528414 SLC26A4O43511 780 aa4.36□□□□□ -1.71
PTPN22-207ENST00000528414 CCDC159P0C7I6 412 aa4.36□□□□□ -1.71
PTPN22-207ENST00000528414 TNNT1P13805 278 aa4.36□□□□□ -1.71
PTPN22-207ENST00000528414 OAS2P29728 719 aaKnown RBP4.36□□□□□ -1.71
PTPN22-207ENST00000528414 LRRC41Q15345 812 aa4.36□□□□□ -1.71
PTPN22-207ENST00000528414 E2F4Q16254 413 aa4.36□□□□□ -1.71
PTPN22-207ENST00000528414 AMHR2Q16671 573 aa4.36□□□□□ -1.71
PTPN22-207ENST00000528414 RNF187Q5TA31 235 aaPredicted RBP4.36□□□□□ -1.71
PTPN22-207ENST00000528414 PPP1R18Q6NYC8 613 aa4.36□□□□□ -1.71
PTPN22-207ENST00000528414 ZNF449Q6P9G9 518 aa4.36□□□□□ -1.71
PTPN22-207ENST00000528414 PACS1Q6VY07 963 aa4.36□□□□□ -1.71
PTPN22-207ENST00000528414 MILR1Q7Z6M3 343 aa4.36□□□□□ -1.71
PTPN22-207ENST00000528414 DEFB132Q7Z7B7 95 aa4.36□□□□□ -1.71
PTPN22-207ENST00000528414 C11orf74Q86VG3 221 aa4.36□□□□□ -1.71
PTPN22-207ENST00000528414 ZNF713Q8N859 430 aaPredicted RBP4.36□□□□□ -1.71
PTPN22-207ENST00000528414 ARL10Q8N8L6 244 aa4.36□□□□□ -1.71
PTPN22-207ENST00000528414 LILRB1Q8NHL6 650 aaPredicted RBP4.36□□□□□ -1.71
PTPN22-207ENST00000528414 PAWRQ96IZ0 340 aaKnown RBP4.36□□□□□ -1.71
PTPN22-207ENST00000528414 C1orf74Q96LT6 269 aa4.36□□□□□ -1.71
PTPN22-207ENST00000528414 UROC1Q96N76 676 aa4.36□□□□□ -1.71
PTPN22-207ENST00000528414 ETAA1Q9NY74 926 aa4.36□□□□□ -1.71
PTPN22-207ENST00000528414 LRRC37A2A6NM11 1700 aa4.36□□□□□ -1.71
PTPN22-207ENST00000528414 ZNF24P17028 368 aa4.36□□□□□ -1.71
PTPN22-207ENST00000528414 TNNI2P48788 182 aa4.36□□□□□ -1.71
PTPN22-207ENST00000528414 PAK2Q13177 524 aa4.36□□□□□ -1.71
PTPN22-207ENST00000528414 R3HDM1Q15032 1099 aaKnown RBP4.36□□□□□ -1.71
PTPN22-207ENST00000528414 PKN2Q16513 984 aaKnown RBP4.36□□□□□ -1.71
PTPN22-207ENST00000528414 INF2Q27J81 1249 aa4.36□□□□□ -1.71
PTPN22-207ENST00000528414 SPECC1Q5M775 1068 aa4.36□□□□□ -1.71
PTPN22-207ENST00000528414 ARHGAP27Q6ZUM4 889 aa4.36□□□□□ -1.71
PTPN22-207ENST00000528414 PPM1EQ8WY54 764 aa4.36□□□□□ -1.71
PTPN22-207ENST00000528414 BHMTQ93088 406 aa4.36□□□□□ -1.71
PTPN22-207ENST00000528414 TRIM6Q9C030 488 aaPredicted RBP4.36□□□□□ -1.71
PTPN22-207ENST00000528414 GDPD2Q9HCC8 539 aa4.36□□□□□ -1.71
PTPN22-207ENST00000528414 TMEM98Q9Y2Y6 226 aa4.36□□□□□ -1.71
PTPN22-207ENST00000528414 PHIPQ8WWQ0 1821 aa4.35□□□□□ -1.71
PTPN22-207ENST00000528414 GTPBP10A4D1E9 387 aaKnown RBP4.35□□□□□ -1.71
PTPN22-207ENST00000528414 A6NCN8 305 aa4.35□□□□□ -1.71
PTPN22-207ENST00000528414 FAM25EA8MYX2 175 aa4.35□□□□□ -1.71
PTPN22-207ENST00000528414 GOLGA6L6A8MZA4 724 aa4.35□□□□□ -1.71
PTPN22-207ENST00000528414 H0Y3Z8 333 aa4.35□□□□□ -1.71
PTPN22-207ENST00000528414 GOLGA6L22H0YM25 854 aa4.35□□□□□ -1.71
PTPN22-207ENST00000528414 TRAPPC10P48553 1259 aa4.35□□□□□ -1.71
PTPN22-207ENST00000528414 TRDNQ13061 729 aa4.35□□□□□ -1.71
PTPN22-207ENST00000528414 FAM212AQ96EL1 285 aa4.35□□□□□ -1.71
PTPN22-207ENST00000528414 PCMTD1Q96MG8 357 aaPredicted RBP4.35□□□□□ -1.71
PTPN22-207ENST00000528414 IWS1Q96ST2 819 aa4.35□□□□□ -1.71
PTPN22-207ENST00000528414 FHDC1Q9C0D6 1143 aaPredicted RBP4.35□□□□□ -1.71
PTPN22-207ENST00000528414 WBP1LQ9NX94 342 aa4.35□□□□□ -1.71
PTPN22-207ENST00000528414 ZMAT5Q9UDW3 170 aaKnown RBP4.35□□□□□ -1.71
PTPN22-207ENST00000528414 A0A0B4J203 849 aa4.35□□□□□ -1.71
PTPN22-207ENST00000528414 FSD2A1L4K1 749 aa4.35□□□□□ -1.71
PTPN22-207ENST00000528414 VCAM1P19320 739 aa4.35□□□□□ -1.71
PTPN22-207ENST00000528414 NDUFV2P19404 249 aa4.35□□□□□ -1.71
PTPN22-207ENST00000528414 KCNA3P22001 575 aa4.35□□□□□ -1.71
PTPN22-207ENST00000528414 TSGA10IPQ3SY00 556 aa4.35□□□□□ -1.71
PTPN22-207ENST00000528414 PARP10Q53GL7 1025 aa4.35□□□□□ -1.71
PTPN22-207ENST00000528414 ACBD5Q5T8D3 534 aaPredicted RBP4.35□□□□□ -1.71
PTPN22-207ENST00000528414 CTR9Q6PD62 1173 aa4.35□□□□□ -1.71
PTPN22-207ENST00000528414 FIP1L1Q6UN15 594 aaKnown RBP4.35□□□□□ -1.71
PTPN22-207ENST00000528414 CYP26C1Q6V0L0 522 aa4.35□□□□□ -1.71
PTPN22-207ENST00000528414 MYOCDQ8IZQ8 938 aa4.35□□□□□ -1.71
PTPN22-207ENST00000528414 IPCEF1Q8WWN9 437 aaPredicted RBP4.35□□□□□ -1.71
PTPN22-207ENST00000528414 IP6K1Q92551 441 aa4.35□□□□□ -1.71
PTPN22-207ENST00000528414 RIC8AQ9NPQ8 531 aa4.35□□□□□ -1.71
PTPN22-207ENST00000528414 EVLQ9UI08 416 aaPredicted RBP4.35□□□□□ -1.71
PTPN22-207ENST00000528414 KDM2BQ8NHM5 1336 aa4.35□□□□□ -1.71
PTPN22-207ENST00000528414 H0YHG0 523 aa4.34□□□□□ -1.71
PTPN22-207ENST00000528414 INMTO95050 263 aa4.34□□□□□ -1.71
PTPN22-207ENST00000528414 YBX3P16989 372 aaKnown RBP eCLIP4.34□□□□□ -1.71
PTPN22-207ENST00000528414 CDC27P30260 824 aa4.34□□□□□ -1.71
PTPN22-207ENST00000528414 CTAG1AP78358 180 aa4.34□□□□□ -1.71
PTPN22-207ENST00000528414 SARNPP82979 210 aaKnown RBP4.34□□□□□ -1.71
PTPN22-207ENST00000528414 TMED1Q13445 227 aa4.34□□□□□ -1.71
PTPN22-207ENST00000528414 SNX32Q86XE0 403 aa4.34□□□□□ -1.71
PTPN22-207ENST00000528414 NACA2Q9H009 215 aa4.34□□□□□ -1.71
PTPN22-207ENST00000528414 ZNF69Q9UC07 566 aa4.34□□□□□ -1.71
PTPN22-207ENST00000528414 STAG3Q9UJ98 1225 aa4.34□□□□□ -1.71
PTPN22-207ENST00000528414 ELL2O00472 640 aaPredicted RBP4.34□□□□□ -1.71
PTPN22-207ENST00000528414 SGTAO43765 313 aa4.34□□□□□ -1.71
PTPN22-207ENST00000528414 ORC4O43929 436 aa4.34□□□□□ -1.71
PTPN22-207ENST00000528414 SETSIPP0DME0 302 aa4.34□□□□□ -1.71
PTPN22-207ENST00000528414 NCAM1P13591 858 aa4.34□□□□□ -1.71
PTPN22-207ENST00000528414 CTHP32929 405 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms