RNA–Protein interactions for RNA: ENST00000528324.5

CMTM1-209, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-209ENST00000528324 APLP1P51693 650 aa16.77■□□□□ 0.28
CMTM1-209ENST00000528324 VPS53Q5VIR6 699 aa16.77■□□□□ 0.28
CMTM1-209ENST00000528324 EPB41L4AQ9HCS5 686 aaPredicted RBP16.77■□□□□ 0.28
CMTM1-209ENST00000528324 ANGEL1Q9UNK9 670 aaKnown RBP16.77■□□□□ 0.28
CMTM1-209ENST00000528324 FGAP02671 866 aa16.76■□□□□ 0.27
CMTM1-209ENST00000528324 MAP3K10Q02779 954 aa16.76■□□□□ 0.27
CMTM1-209ENST00000528324 PDE4BQ07343 736 aa16.76■□□□□ 0.27
CMTM1-209ENST00000528324 IMMTQ16891 758 aaKnown RBP16.76■□□□□ 0.27
CMTM1-209ENST00000528324 MIGA2Q7L4E1 593 aa16.76■□□□□ 0.27
CMTM1-209ENST00000528324 METTL16Q86W50 562 aaKnown RBP16.76■□□□□ 0.27
CMTM1-209ENST00000528324 PAPPA2Q9BXP8 1791 aa16.76■□□□□ 0.27
CMTM1-209ENST00000528324 ZNF213O14771 459 aa16.75■□□□□ 0.27
CMTM1-209ENST00000528324 PLCD1P51178 756 aa16.75■□□□□ 0.27
CMTM1-209ENST00000528324 PPARAQ07869 468 aa16.75■□□□□ 0.27
CMTM1-209ENST00000528324 PRKG1Q13976 671 aa16.75■□□□□ 0.27
CMTM1-209ENST00000528324 SLC4A8Q2Y0W8 1093 aa16.75■□□□□ 0.27
CMTM1-209ENST00000528324 DLK2Q6UY11 383 aa16.75■□□□□ 0.27
CMTM1-209ENST00000528324 CDAN1Q8IWY9 1227 aa16.75■□□□□ 0.27
CMTM1-209ENST00000528324 RNF41Q9H4P4 317 aaPredicted RBP16.75■□□□□ 0.27
CMTM1-209ENST00000528324 ABT1Q9ULW3 272 aaKnown RBP16.75■□□□□ 0.27
CMTM1-209ENST00000528324 CSADQ9Y600 493 aa16.75■□□□□ 0.27
CMTM1-209ENST00000528324 DDX60LQ5H9U9 1706 aaKnown RBP16.74■□□□□ 0.27
CMTM1-209ENST00000528324 EPB41L2O43491 1005 aaKnown RBP16.74■□□□□ 0.27
CMTM1-209ENST00000528324 USP2O75604 605 aaPredicted RBP16.74■□□□□ 0.27
CMTM1-209ENST00000528324 PCP11498 1178 aaKnown RBP16.74■□□□□ 0.27
CMTM1-209ENST00000528324 NT5C2P49902 561 aa16.74■□□□□ 0.27
CMTM1-209ENST00000528324 C1QTNF8P60827 252 aa16.74■□□□□ 0.27
CMTM1-209ENST00000528324 MAP3K9P80192 1104 aa16.74■□□□□ 0.27
CMTM1-209ENST00000528324 MAP3K11Q16584 847 aa16.74■□□□□ 0.27
CMTM1-209ENST00000528324 RNF20Q5VTR2 975 aa16.74■□□□□ 0.27
CMTM1-209ENST00000528324 CST9Q5W186 159 aa16.74■□□□□ 0.27
CMTM1-209ENST00000528324 ANKRD13AQ8IZ07 590 aa16.74■□□□□ 0.27
CMTM1-209ENST00000528324 MAP4K1Q92918 833 aa16.74■□□□□ 0.27
CMTM1-209ENST00000528324 KLRG1Q96E93 195 aa16.74■□□□□ 0.27
CMTM1-209ENST00000528324 WRNIP1Q96S55 665 aa16.74■□□□□ 0.27
CMTM1-209ENST00000528324 MKNK2Q9HBH9 465 aa16.74■□□□□ 0.27
CMTM1-209ENST00000528324 CREBZFQ9NS37 354 aa16.74■□□□□ 0.27
CMTM1-209ENST00000528324 GINM1Q9NU53 330 aa16.74■□□□□ 0.27
CMTM1-209ENST00000528324 ANAPC4Q9UJX5 808 aa16.74■□□□□ 0.27
CMTM1-209ENST00000528324 FOXP2O15409 715 aa16.73■□□□□ 0.27
CMTM1-209ENST00000528324 CTNND1O60716 968 aaKnown RBP16.73■□□□□ 0.27
CMTM1-209ENST00000528324 CYP2D6P10635 497 aa16.73■□□□□ 0.27
CMTM1-209ENST00000528324 HUNKP57058 714 aa16.73■□□□□ 0.27
CMTM1-209ENST00000528324 FMR1Q06787 632 aaKnown RBP eCLIP16.73■□□□□ 0.27
CMTM1-209ENST00000528324 C16orf86Q6ZW13 317 aa16.73■□□□□ 0.27
CMTM1-209ENST00000528324 IL25Q9H293 177 aa16.73■□□□□ 0.27
CMTM1-209ENST00000528324 SSC5DA1L4H1 1573 aa16.72■□□□□ 0.27
CMTM1-209ENST00000528324 LAMB1P07942 1786 aa16.72■□□□□ 0.27
CMTM1-209ENST00000528324 CYP2D7A0A087X1C5 515 aa16.72■□□□□ 0.27
CMTM1-209ENST00000528324 GABPAQ06546 454 aa16.72■□□□□ 0.27
CMTM1-209ENST00000528324 CERKLQ49MI3 558 aaPredicted RBP16.72■□□□□ 0.27
CMTM1-209ENST00000528324 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.72■□□□□ 0.27
CMTM1-209ENST00000528324 HHIPL1Q96JK4 782 aa16.72■□□□□ 0.27
CMTM1-209ENST00000528324 CCDC17Q96LX7 622 aa16.72■□□□□ 0.27
CMTM1-209ENST00000528324 LSG1Q9H089 658 aaKnown RBP16.72■□□□□ 0.27
CMTM1-209ENST00000528324 CABP5Q9NP86 173 aa16.72■□□□□ 0.27
CMTM1-209ENST00000528324 PICK1Q9NRD5 415 aa16.72■□□□□ 0.27
CMTM1-209ENST00000528324 ZNF112Q9UJU3 913 aa16.72■□□□□ 0.27
CMTM1-209ENST00000528324 TLL2Q9Y6L7 1015 aa16.72■□□□□ 0.27
CMTM1-209ENST00000528324 ROBO3Q96MS0 1386 aa16.72■□□□□ 0.27
CMTM1-209ENST00000528324 MYH8P13535 1937 aa16.71■□□□□ 0.27
CMTM1-209ENST00000528324 UBE2Q2LH0YL09 131 aa16.71■□□□□ 0.27
CMTM1-209ENST00000528324 MCCP23508 829 aa16.71■□□□□ 0.27
CMTM1-209ENST00000528324 CDK8P49336 464 aa16.71■□□□□ 0.27
CMTM1-209ENST00000528324 PTH1RQ03431 593 aa16.71■□□□□ 0.27
CMTM1-209ENST00000528324 LDLRAD1Q5T700 205 aa16.71■□□□□ 0.27
CMTM1-209ENST00000528324 TATDN1Q6P1N9 297 aa16.71■□□□□ 0.27
CMTM1-209ENST00000528324 MFSD6Q6ZSS7 791 aa16.71■□□□□ 0.27
CMTM1-209ENST00000528324 SAPCD2Q86UD0 394 aa16.71■□□□□ 0.27
CMTM1-209ENST00000528324 ZNF444Q8N0Y2 327 aaPredicted RBP16.71■□□□□ 0.27
CMTM1-209ENST00000528324 SLC10A4Q96EP9 437 aa16.71■□□□□ 0.27
CMTM1-209ENST00000528324 RBM8AQ9Y5S9 174 aaKnown RBP16.71■□□□□ 0.27
CMTM1-209ENST00000528324 FAM196BA6NMK8 535 aa16.7■□□□□ 0.26
CMTM1-209ENST00000528324 PHF20L1A8MW92 1017 aa16.7■□□□□ 0.26
CMTM1-209ENST00000528324 ASNSP08243 561 aa16.7■□□□□ 0.26
CMTM1-209ENST00000528324 ZKSCAN1P17029 563 aaPredicted RBP16.7■□□□□ 0.26
CMTM1-209ENST00000528324 TRDNQ13061 729 aa16.7■□□□□ 0.26
CMTM1-209ENST00000528324 NOL9Q5SY16 702 aaKnown RBP16.7■□□□□ 0.26
CMTM1-209ENST00000528324 DYNLL2Q96FJ2 89 aa16.7■□□□□ 0.26
CMTM1-209ENST00000528324 CNNM2Q9H8M5 875 aa16.7■□□□□ 0.26
CMTM1-209ENST00000528324 HSPA6P17066 643 aa16.69■□□□□ 0.26
CMTM1-209ENST00000528324 SHMT1P34896 483 aa16.69■□□□□ 0.26
CMTM1-209ENST00000528324 CAP2P40123 477 aa16.69■□□□□ 0.26
CMTM1-209ENST00000528324 HAND2P61296 217 aa16.69■□□□□ 0.26
CMTM1-209ENST00000528324 CTDSPL2Q05D32 466 aa16.69■□□□□ 0.26
CMTM1-209ENST00000528324 ABCB5Q2M3G0 1257 aa16.69■□□□□ 0.26
CMTM1-209ENST00000528324 PPP4R3BQ5MIZ7 849 aa16.69■□□□□ 0.26
CMTM1-209ENST00000528324 AKNAD1Q5T1N1 836 aa16.69■□□□□ 0.26
CMTM1-209ENST00000528324 MOB2Q70IA6 237 aa16.69■□□□□ 0.26
CMTM1-209ENST00000528324 SCYL3Q8IZE3 742 aa16.69■□□□□ 0.26
CMTM1-209ENST00000528324 CCDC102AQ96A19 550 aa16.69■□□□□ 0.26
CMTM1-209ENST00000528324 TBC1D2Q9BYX2 928 aa16.69■□□□□ 0.26
CMTM1-209ENST00000528324 TOMM22Q9NS69 142 aa16.69■□□□□ 0.26
CMTM1-209ENST00000528324 SIPA1L1O43166 1804 aa16.68■□□□□ 0.26
CMTM1-209ENST00000528324 MPHOSPH10O00566 681 aaKnown RBP16.68■□□□□ 0.26
CMTM1-209ENST00000528324 ORC4O43929 436 aa16.68■□□□□ 0.26
CMTM1-209ENST00000528324 INPP5BP32019 993 aa16.68■□□□□ 0.26
CMTM1-209ENST00000528324 ZNF157P51786 506 aaPredicted RBP16.68■□□□□ 0.26
CMTM1-209ENST00000528324 VGLL4Q14135 290 aa16.68■□□□□ 0.26
CMTM1-209ENST00000528324 RGMBQ6NW40 437 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms