RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 GINM1Q9NU53 330 aa11.67□□□□□ -0.54
CHD7-208ENST00000528280 TLR7Q9NYK1 1049 aaKnown RBP11.67□□□□□ -0.54
CHD7-208ENST00000528280 ZHX2Q9Y6X8 837 aa11.67□□□□□ -0.54
CHD7-208ENST00000528280 COL2A1P02458 1487 aaPredicted RBP11.67□□□□□ -0.54
CHD7-208ENST00000528280 HTTP42858 3142 aa11.67□□□□□ -0.54
CHD7-208ENST00000528280 COL6A3P12111 3177 aa11.66□□□□□ -0.54
CHD7-208ENST00000528280 BTBD19C9JJ37 291 aa11.66□□□□□ -0.54
CHD7-208ENST00000528280 APBB1O00213 710 aa11.66□□□□□ -0.54
CHD7-208ENST00000528280 HLA-DOAP06340 250 aa11.66□□□□□ -0.54
CHD7-208ENST00000528280 FAM43AQ8N2R8 423 aa11.66□□□□□ -0.54
CHD7-208ENST00000528280 MAGEB6Q8N7X4 407 aa11.66□□□□□ -0.54
CHD7-208ENST00000528280 TGFBRAP1Q8WUH2 860 aa11.66□□□□□ -0.54
CHD7-208ENST00000528280 EFCC1Q9HA90 598 aa11.66□□□□□ -0.54
CHD7-208ENST00000528280 SLC45A1Q9Y2W3 748 aa11.66□□□□□ -0.54
CHD7-208ENST00000528280 AFG3L2Q9Y4W6 797 aa11.66□□□□□ -0.54
CHD7-208ENST00000528280 RFX7Q2KHR2 1363 aa11.66□□□□□ -0.54
CHD7-208ENST00000528280 PDHXO00330 501 aa11.65□□□□□ -0.54
CHD7-208ENST00000528280 ATP5JP18859 108 aa11.65□□□□□ -0.54
CHD7-208ENST00000528280 USP5P45974 858 aa11.65□□□□□ -0.54
CHD7-208ENST00000528280 C20orf194Q5TEA3 1177 aa11.65□□□□□ -0.54
CHD7-208ENST00000528280 TTC6Q86TZ1 520 aa11.65□□□□□ -0.54
CHD7-208ENST00000528280 CRACR2BQ8N4Y2 399 aaPredicted RBP11.65□□□□□ -0.54
CHD7-208ENST00000528280 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.65□□□□□ -0.54
CHD7-208ENST00000528280 AS3MTQ9HBK9 375 aa11.65□□□□□ -0.54
CHD7-208ENST00000528280 TAOK2Q9UL54 1235 aa11.65□□□□□ -0.54
CHD7-208ENST00000528280 TRIM17Q9Y577 477 aa11.65□□□□□ -0.54
CHD7-208ENST00000528280 LAMB1P07942 1786 aa11.64□□□□□ -0.55
CHD7-208ENST00000528280 A0A0G2JLL6 359 aaPredicted RBP11.64□□□□□ -0.55
CHD7-208ENST00000528280 HOXD10P28358 340 aa11.64□□□□□ -0.55
CHD7-208ENST00000528280 CAP2P40123 477 aa11.64□□□□□ -0.55
CHD7-208ENST00000528280 PRMT2P55345 433 aa11.64□□□□□ -0.55
CHD7-208ENST00000528280 AAMPQ13685 434 aa11.64□□□□□ -0.55
CHD7-208ENST00000528280 SLC9C2Q5TAH2 1124 aa11.64□□□□□ -0.55
CHD7-208ENST00000528280 ZSCAN25Q6NSZ9 544 aa11.64□□□□□ -0.55
CHD7-208ENST00000528280 OTOP1Q7RTM1 612 aa11.64□□□□□ -0.55
CHD7-208ENST00000528280 PRRT2Q7Z6L0 340 aaPredicted RBP11.64□□□□□ -0.55
CHD7-208ENST00000528280 NBPF11Q86T75 865 aa11.64□□□□□ -0.55
CHD7-208ENST00000528280 METTL16Q86W50 562 aaKnown RBP11.64□□□□□ -0.55
CHD7-208ENST00000528280 GPATCH3Q96I76 525 aa11.64□□□□□ -0.55
CHD7-208ENST00000528280 PARK7Q99497 189 aaKnown RBP11.64□□□□□ -0.55
CHD7-208ENST00000528280 DCTPP1Q9H773 170 aa11.64□□□□□ -0.55
CHD7-208ENST00000528280 MAGEB6P1A0A0J9YX57 407 aa11.63□□□□□ -0.55
CHD7-208ENST00000528280 USP17L5A8MUK1 530 aa11.63□□□□□ -0.55
CHD7-208ENST00000528280 ASNSP08243 561 aa11.63□□□□□ -0.55
CHD7-208ENST00000528280 PABPC4Q13310 644 aaKnown RBP eCLIP11.63□□□□□ -0.55
CHD7-208ENST00000528280 MAPKAPK5Q8IW41 473 aa11.63□□□□□ -0.55
CHD7-208ENST00000528280 ZNF280CQ8ND82 737 aa11.63□□□□□ -0.55
CHD7-208ENST00000528280 CD99L2Q8TCZ2 262 aa11.63□□□□□ -0.55
CHD7-208ENST00000528280 ANTXR1Q9H6X2 564 aa11.63□□□□□ -0.55
CHD7-208ENST00000528280 PTPN22Q9Y2R2 807 aa11.63□□□□□ -0.55
CHD7-208ENST00000528280 BRCA2P51587 3418 aa11.63□□□□□ -0.55
CHD7-208ENST00000528280 FLT1P17948 1338 aa11.62□□□□□ -0.55
CHD7-208ENST00000528280 OTOFQ9HC10 1997 aa11.62□□□□□ -0.55
CHD7-208ENST00000528280 GOLIM4O00461 696 aa11.62□□□□□ -0.55
CHD7-208ENST00000528280 EN2P19622 333 aaPredicted RBP11.62□□□□□ -0.55
CHD7-208ENST00000528280 C17orf99Q6UX52 265 aa11.62□□□□□ -0.55
CHD7-208ENST00000528280 ADGRA1Q86SQ6 560 aa11.62□□□□□ -0.55
CHD7-208ENST00000528280 PROCA1Q8NCQ7 364 aaPredicted RBP11.62□□□□□ -0.55
CHD7-208ENST00000528280 DNAJC2Q99543 621 aaKnown RBP11.62□□□□□ -0.55
CHD7-208ENST00000528280 HAUS7Q99871 368 aa11.62□□□□□ -0.55
CHD7-208ENST00000528280 WDR18Q9BV38 432 aa11.62□□□□□ -0.55
CHD7-208ENST00000528280 CRNKL1Q9BZJ0 848 aaKnown RBP11.62□□□□□ -0.55
CHD7-208ENST00000528280 PAG1Q9NWQ8 432 aa11.62□□□□□ -0.55
CHD7-208ENST00000528280 ZBTB47Q9UFB7 747 aaPredicted RBP11.62□□□□□ -0.55
CHD7-208ENST00000528280 PNMA3Q9UL41 463 aa11.62□□□□□ -0.55
CHD7-208ENST00000528280 PALD1Q9ULE6 856 aa11.62□□□□□ -0.55
CHD7-208ENST00000528280 C19orf81C9J6K1 198 aa11.61□□□□□ -0.55
CHD7-208ENST00000528280 PDE6AP16499 860 aa11.61□□□□□ -0.55
CHD7-208ENST00000528280 MNX1P50219 401 aaPredicted RBP11.61□□□□□ -0.55
CHD7-208ENST00000528280 RRP1P56182 461 aaKnown RBP11.61□□□□□ -0.55
CHD7-208ENST00000528280 DYNLL1P63167 89 aaKnown RBP11.61□□□□□ -0.55
CHD7-208ENST00000528280 LACTBP83111 547 aaPredicted RBP11.61□□□□□ -0.55
CHD7-208ENST00000528280 SPP2Q13103 211 aa11.61□□□□□ -0.55
CHD7-208ENST00000528280 MOGSQ13724 837 aa11.61□□□□□ -0.55
CHD7-208ENST00000528280 LRRFIP1Q32MZ4 808 aaKnown RBP11.61□□□□□ -0.55
CHD7-208ENST00000528280 GPAT2Q6NUI2 795 aa11.61□□□□□ -0.55
CHD7-208ENST00000528280 GADL1Q6ZQY3 521 aa11.61□□□□□ -0.55
CHD7-208ENST00000528280 MIGA1Q8NAN2 632 aa11.61□□□□□ -0.55
CHD7-208ENST00000528280 DDRGK1Q96HY6 314 aa11.61□□□□□ -0.55
CHD7-208ENST00000528280 BCL11AQ9H165 835 aa11.61□□□□□ -0.55
CHD7-208ENST00000528280 EHD4Q9H223 541 aa11.61□□□□□ -0.55
CHD7-208ENST00000528280 BOLA2Q9H3K6 86 aa11.61□□□□□ -0.55
CHD7-208ENST00000528280 ECHDC1Q9NTX5 307 aa11.61□□□□□ -0.55
CHD7-208ENST00000528280 TRIM75PA6NK02 468 aa11.6□□□□□ -0.55
CHD7-208ENST00000528280 H0YGN5 161 aa11.6□□□□□ -0.55
CHD7-208ENST00000528280 POLR3DP05423 398 aaPredicted RBP11.6□□□□□ -0.55
CHD7-208ENST00000528280 OSBPP22059 807 aa11.6□□□□□ -0.55
CHD7-208ENST00000528280 UBE3CQ15386 1083 aa11.6□□□□□ -0.55
CHD7-208ENST00000528280 AMOTL1Q8IY63 956 aa11.6□□□□□ -0.55
CHD7-208ENST00000528280 ATP8A2Q9NTI2 1148 aa11.6□□□□□ -0.55
CHD7-208ENST00000528280 TMOD4Q9NZQ9 345 aa11.6□□□□□ -0.55
CHD7-208ENST00000528280 SERPINB13Q9UIV8 391 aa11.6□□□□□ -0.55
CHD7-208ENST00000528280 AGTPBP1Q9UPW5 1226 aa11.6□□□□□ -0.55
CHD7-208ENST00000528280 NDUFB9Q9Y6M9 179 aa11.6□□□□□ -0.55
CHD7-208ENST00000528280 DOCK2Q92608 1830 aa11.6□□□□□ -0.55
CHD7-208ENST00000528280 ZNF532Q9HCE3 1301 aa11.6□□□□□ -0.55
CHD7-208ENST00000528280 FMNL1O95466 1100 aaPredicted RBP11.59□□□□□ -0.55
CHD7-208ENST00000528280 GCLCP48506 637 aaPredicted RBP11.59□□□□□ -0.55
CHD7-208ENST00000528280 SH3D19Q5HYK7 790 aa11.59□□□□□ -0.55
CHD7-208ENST00000528280 TATDN1Q6P1N9 297 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms