RNA–Protein interactions for RNA: ENST00000527739.5

CAPN1-211, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-211ENST00000527739 MIGA1Q8NAN2 632 aa23.48■■□□□ 1.35
CAPN1-211ENST00000527739 ARMC5Q96C12 935 aa23.48■■□□□ 1.35
CAPN1-211ENST00000527739 TRIM34Q9BYJ4 488 aa23.48■■□□□ 1.35
CAPN1-211ENST00000527739 PCDH10Q9P2E7 1040 aa23.48■■□□□ 1.35
CAPN1-211ENST00000527739 MAP3K12Q12852 859 aa23.47■■□□□ 1.35
CAPN1-211ENST00000527739 KIF22Q14807 665 aa23.47■■□□□ 1.35
CAPN1-211ENST00000527739 CCDC84Q86UT8 332 aaPredicted RBP23.47■■□□□ 1.35
CAPN1-211ENST00000527739 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.47■■□□□ 1.35
CAPN1-211ENST00000527739 CPA4Q9UI42 421 aa23.47■■□□□ 1.35
CAPN1-211ENST00000527739 TRIM75PA6NK02 468 aa23.46■■□□□ 1.35
CAPN1-211ENST00000527739 IGSF3O75054 1194 aa23.46■■□□□ 1.35
CAPN1-211ENST00000527739 EN2P19622 333 aaPredicted RBP23.46■■□□□ 1.35
CAPN1-211ENST00000527739 FASTKD5Q7L8L6 764 aaKnown RBP23.46■■□□□ 1.35
CAPN1-211ENST00000527739 RBBP6Q7Z6E9 1792 aaKnown RBP23.46■■□□□ 1.35
CAPN1-211ENST00000527739 DNAJC2Q99543 621 aaKnown RBP23.46■■□□□ 1.35
CAPN1-211ENST00000527739 DHX36Q9H2U1 1008 aaKnown RBP23.46■■□□□ 1.35
CAPN1-211ENST00000527739 PI4KBQ9UBF8 816 aa23.46■■□□□ 1.35
CAPN1-211ENST00000527739 SAP30BPQ9UHR5 308 aaKnown RBP23.46■■□□□ 1.35
CAPN1-211ENST00000527739 AFG3L2Q9Y4W6 797 aa23.46■■□□□ 1.35
CAPN1-211ENST00000527739 ZSWIM8A7E2V4 1837 aa23.45■■□□□ 1.34
CAPN1-211ENST00000527739 PTCH2Q9Y6C5 1203 aa23.45■■□□□ 1.34
CAPN1-211ENST00000527739 USP5P45974 858 aa23.44■■□□□ 1.34
CAPN1-211ENST00000527739 MOGSQ13724 837 aa23.44■■□□□ 1.34
CAPN1-211ENST00000527739 SLC4A8Q2Y0W8 1093 aa23.44■■□□□ 1.34
CAPN1-211ENST00000527739 CRACR2BQ8N4Y2 399 aaPredicted RBP23.44■■□□□ 1.34
CAPN1-211ENST00000527739 PALD1Q9ULE6 856 aa23.44■■□□□ 1.34
CAPN1-211ENST00000527739 FLT1P17948 1338 aa23.43■■□□□ 1.34
CAPN1-211ENST00000527739 A0A0G2JLL6 359 aaPredicted RBP23.43■■□□□ 1.34
CAPN1-211ENST00000527739 TTF1Q15361 905 aaPredicted RBP23.43■■□□□ 1.34
CAPN1-211ENST00000527739 GPAT2Q6NUI2 795 aa23.43■■□□□ 1.34
CAPN1-211ENST00000527739 PRRT2Q7Z6L0 340 aaPredicted RBP23.43■■□□□ 1.34
CAPN1-211ENST00000527739 YTHDC1Q96MU7 727 aaKnown RBP23.43■■□□□ 1.34
CAPN1-211ENST00000527739 ARHGAP39Q9C0H5 1083 aa23.43■■□□□ 1.34
CAPN1-211ENST00000527739 HERC5Q9UII4 1024 aaKnown RBP23.43■■□□□ 1.34
CAPN1-211ENST00000527739 GOLIM4O00461 696 aa23.42■■□□□ 1.34
CAPN1-211ENST00000527739 HLA-DOAP06340 250 aa23.42■■□□□ 1.34
CAPN1-211ENST00000527739 CYP2C8P10632 490 aa23.42■■□□□ 1.34
CAPN1-211ENST00000527739 ZNF333Q96JL9 665 aa23.42■■□□□ 1.34
CAPN1-211ENST00000527739 PARK7Q99497 189 aaKnown RBP23.42■■□□□ 1.34
CAPN1-211ENST00000527739 KIAA0100Q14667 2235 aaKnown RBP23.41■■□□□ 1.34
CAPN1-211ENST00000527739 CAP2P40123 477 aa23.41■■□□□ 1.34
CAPN1-211ENST00000527739 LACTBP83111 547 aaPredicted RBP23.41■■□□□ 1.34
CAPN1-211ENST00000527739 SPP2Q13103 211 aa23.41■■□□□ 1.34
CAPN1-211ENST00000527739 SLC9C2Q5TAH2 1124 aa23.41■■□□□ 1.34
CAPN1-211ENST00000527739 C17orf99Q6UX52 265 aa23.41■■□□□ 1.34
CAPN1-211ENST00000527739 FOXP4Q8IVH2 680 aaPredicted RBP23.41■■□□□ 1.34
CAPN1-211ENST00000527739 RRP1BQ14684 758 aaKnown RBP23.4■■□□□ 1.34
CAPN1-211ENST00000527739 CERS3Q8IU89 383 aa23.4■■□□□ 1.34
CAPN1-211ENST00000527739 LRRCC1Q9C099 1032 aa23.4■■□□□ 1.34
CAPN1-211ENST00000527739 BOLA2Q9H3K6 86 aa23.4■■□□□ 1.34
CAPN1-211ENST00000527739 COL2A1P02458 1487 aaPredicted RBP23.4■■□□□ 1.34
CAPN1-211ENST00000527739 DOCK2Q92608 1830 aa23.39■■□□□ 1.33
CAPN1-211ENST00000527739 USP17L5A8MUK1 530 aa23.39■■□□□ 1.33
CAPN1-211ENST00000527739 SMARCA5O60264 1052 aaPredicted RBP23.39■■□□□ 1.33
CAPN1-211ENST00000527739 MYCP01106 439 aaPredicted RBP23.39■■□□□ 1.33
CAPN1-211ENST00000527739 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.39■■□□□ 1.33
CAPN1-211ENST00000527739 MAGEB6P1A0A0J9YX57 407 aa23.38■■□□□ 1.33
CAPN1-211ENST00000527739 FMNL1O95466 1100 aaPredicted RBP23.38■■□□□ 1.33
CAPN1-211ENST00000527739 PSMC4P43686 418 aa23.38■■□□□ 1.33
CAPN1-211ENST00000527739 SLC9C1Q4G0N8 1177 aa23.38■■□□□ 1.33
CAPN1-211ENST00000527739 ZNF280CQ8ND82 737 aa23.38■■□□□ 1.33
CAPN1-211ENST00000527739 EDC3Q96F86 508 aaKnown RBP23.38■■□□□ 1.33
CAPN1-211ENST00000527739 AS3MTQ9HBK9 375 aa23.38■■□□□ 1.33
CAPN1-211ENST00000527739 GDF11O95390 407 aa23.37■■□□□ 1.33
CAPN1-211ENST00000527739 PDE6AP16499 860 aa23.37■■□□□ 1.33
CAPN1-211ENST00000527739 TMED8Q6PL24 325 aaPredicted RBP23.37■■□□□ 1.33
CAPN1-211ENST00000527739 SMCR8Q8TEV9 937 aaPredicted RBP23.37■■□□□ 1.33
CAPN1-211ENST00000527739 TMEM106CQ9BVX2 250 aa23.37■■□□□ 1.33
CAPN1-211ENST00000527739 SH3TC2Q8TF17 1288 aa23.36■■□□□ 1.33
CAPN1-211ENST00000527739 PAG1Q9NWQ8 432 aa23.36■■□□□ 1.33
CAPN1-211ENST00000527739 ZNF532Q9HCE3 1301 aa23.35■■□□□ 1.33
CAPN1-211ENST00000527739 ATP5JP18859 108 aa23.35■■□□□ 1.33
CAPN1-211ENST00000527739 CTGFP29279 349 aa23.35■■□□□ 1.33
CAPN1-211ENST00000527739 HMGCS2P54868 508 aa23.35■■□□□ 1.33
CAPN1-211ENST00000527739 HABP4Q5JVS0 413 aaKnown RBP23.35■■□□□ 1.33
CAPN1-211ENST00000527739 NBPF11Q86T75 865 aa23.35■■□□□ 1.33
CAPN1-211ENST00000527739 TBC1D2Q9BYX2 928 aa23.35■■□□□ 1.33
CAPN1-211ENST00000527739 DNAJC18Q9H819 358 aa23.35■■□□□ 1.33
CAPN1-211ENST00000527739 AGTPBP1Q9UPW5 1226 aa23.35■■□□□ 1.33
CAPN1-211ENST00000527739 SLC45A1Q9Y2W3 748 aa23.35■■□□□ 1.33
CAPN1-211ENST00000527739 GNRH1P01148 92 aa23.34■■□□□ 1.33
CAPN1-211ENST00000527739 POLR3DP05423 398 aaPredicted RBP23.34■■□□□ 1.33
CAPN1-211ENST00000527739 ASNSP08243 561 aa23.34■■□□□ 1.33
CAPN1-211ENST00000527739 HOXD10P28358 340 aa23.34■■□□□ 1.33
CAPN1-211ENST00000527739 TREML2Q5T2D2 321 aa23.34■■□□□ 1.33
CAPN1-211ENST00000527739 TTC6Q86TZ1 520 aa23.34■■□□□ 1.33
CAPN1-211ENST00000527739 GCC1Q96CN9 775 aa23.34■■□□□ 1.33
CAPN1-211ENST00000527739 TRIM47Q96LD4 638 aa23.34■■□□□ 1.33
CAPN1-211ENST00000527739 CRNKL1Q9BZJ0 848 aaKnown RBP23.34■■□□□ 1.33
CAPN1-211ENST00000527739 ADGRA2Q96PE1 1338 aa23.33■■□□□ 1.33
CAPN1-211ENST00000527739 MAST2Q6P0Q8 1798 aa23.33■■□□□ 1.33
CAPN1-211ENST00000527739 JAG1P78504 1218 aa23.33■■□□□ 1.33
CAPN1-211ENST00000527739 RIOK1Q9BRS2 568 aaKnown RBP23.33■■□□□ 1.33
CAPN1-211ENST00000527739 PNMA3Q9UL41 463 aa23.33■■□□□ 1.33
CAPN1-211ENST00000527739 BCRP11274 1271 aa23.32■■□□□ 1.32
CAPN1-211ENST00000527739 FCGRTP55899 365 aa23.32■■□□□ 1.32
CAPN1-211ENST00000527739 SHROOM1Q2M3G4 852 aaPredicted RBP23.32■■□□□ 1.32
CAPN1-211ENST00000527739 METTL16Q86W50 562 aaKnown RBP23.32■■□□□ 1.32
CAPN1-211ENST00000527739 PROCA1Q8NCQ7 364 aaPredicted RBP23.32■■□□□ 1.32
CAPN1-211ENST00000527739 RAET1EQ8TD07 263 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms