RNA–Protein interactions for RNA: ENST00000527619.5

SOX6-208, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-208ENST00000527619 AGAP3Q96P47 875 aa8.48□□□□□ -1.05
SOX6-208ENST00000527619 HSD3B7Q9H2F3 369 aa8.48□□□□□ -1.05
SOX6-208ENST00000527619 VIPAS39Q9H9C1 493 aa8.48□□□□□ -1.05
SOX6-208ENST00000527619 HMG20BQ9P0W2 317 aa8.48□□□□□ -1.05
SOX6-208ENST00000527619 TSPYL4Q9UJ04 414 aa8.48□□□□□ -1.05
SOX6-208ENST00000527619 FAM169AQ9Y6X4 670 aa8.48□□□□□ -1.05
SOX6-208ENST00000527619 A2ML1A8K2U0 1454 aa8.48□□□□□ -1.05
SOX6-208ENST00000527619 A0A1B0GVL5 298 aa8.47□□□□□ -1.05
SOX6-208ENST00000527619 LRRIQ3A6PVS8 624 aaPredicted RBP8.47□□□□□ -1.05
SOX6-208ENST00000527619 BIN1O00499 593 aa8.47□□□□□ -1.05
SOX6-208ENST00000527619 EBAG9O00559 213 aa8.47□□□□□ -1.05
SOX6-208ENST00000527619 MYO1BO43795 1136 aa8.47□□□□□ -1.05
SOX6-208ENST00000527619 SHOX2O60902 331 aaPredicted RBP8.47□□□□□ -1.05
SOX6-208ENST00000527619 FAM200BP0CF97 657 aa8.47□□□□□ -1.05
SOX6-208ENST00000527619 GCFC2P16383 781 aaKnown RBP8.47□□□□□ -1.05
SOX6-208ENST00000527619 NDUFA8P51970 172 aa8.47□□□□□ -1.05
SOX6-208ENST00000527619 VSNL1P62760 191 aa8.47□□□□□ -1.05
SOX6-208ENST00000527619 WDR78Q5VTH9 848 aa8.47□□□□□ -1.05
SOX6-208ENST00000527619 ADALQ6DHV7 355 aa8.47□□□□□ -1.05
SOX6-208ENST00000527619 ARL10Q8N8L6 244 aa8.47□□□□□ -1.05
SOX6-208ENST00000527619 SMARCC2Q8TAQ2 1214 aa8.47□□□□□ -1.05
SOX6-208ENST00000527619 SNRNP27Q8WVK2 155 aaKnown RBP8.47□□□□□ -1.05
SOX6-208ENST00000527619 CLIC6Q96NY7 704 aa8.47□□□□□ -1.05
SOX6-208ENST00000527619 SNRKQ9NRH2 765 aa8.47□□□□□ -1.05
SOX6-208ENST00000527619 UTP6Q9NYH9 597 aaKnown RBP8.47□□□□□ -1.05
SOX6-208ENST00000527619 MIS18AQ9NYP9 233 aa8.47□□□□□ -1.05
SOX6-208ENST00000527619 PCDHA7Q9UN72 937 aa8.47□□□□□ -1.05
SOX6-208ENST00000527619 NEDD4P46934 1319 aa8.47□□□□□ -1.05
SOX6-208ENST00000527619 SH3BP5O60239 455 aa8.47□□□□□ -1.05
SOX6-208ENST00000527619 PRPF6O94906 941 aaKnown RBP8.47□□□□□ -1.05
SOX6-208ENST00000527619 SYF2O95926 243 aaKnown RBP8.47□□□□□ -1.05
SOX6-208ENST00000527619 INPP5BP32019 993 aa8.47□□□□□ -1.05
SOX6-208ENST00000527619 NMIQ13287 307 aaPredicted RBP8.47□□□□□ -1.05
SOX6-208ENST00000527619 KARSQ15046 597 aaKnown RBP8.47□□□□□ -1.05
SOX6-208ENST00000527619 BICD1Q96G01 975 aa8.47□□□□□ -1.05
SOX6-208ENST00000527619 PLEKHG4BQ96PX9 1271 aa8.47□□□□□ -1.05
SOX6-208ENST00000527619 LLPHQ9BRT6 129 aaKnown RBP8.47□□□□□ -1.05
SOX6-208ENST00000527619 UBA5Q9GZZ9 404 aa8.47□□□□□ -1.05
SOX6-208ENST00000527619 ARHGEF10LQ9HCE6 1279 aa8.47□□□□□ -1.05
SOX6-208ENST00000527619 ECHDC1Q9NTX5 307 aa8.47□□□□□ -1.05
SOX6-208ENST00000527619 GABBR1Q9UBS5 961 aa8.47□□□□□ -1.05
SOX6-208ENST00000527619 CEP170BQ9Y4F5 1589 aaPredicted RBP8.47□□□□□ -1.05
SOX6-208ENST00000527619 EDC4Q6P2E9 1401 aaKnown RBP8.47□□□□□ -1.05
SOX6-208ENST00000527619 TMEM232C9JQI7 657 aa8.47□□□□□ -1.05
SOX6-208ENST00000527619 CCNHP51946 323 aaPredicted RBP8.47□□□□□ -1.05
SOX6-208ENST00000527619 MYL5Q02045 173 aa8.47□□□□□ -1.05
SOX6-208ENST00000527619 DDR1Q08345 913 aa8.47□□□□□ -1.05
SOX6-208ENST00000527619 TBX2Q13207 712 aaPredicted RBP8.47□□□□□ -1.05
SOX6-208ENST00000527619 SULT6B1Q6IMI4 303 aa8.47□□□□□ -1.05
SOX6-208ENST00000527619 TTC30AQ86WT1 665 aa8.47□□□□□ -1.05
SOX6-208ENST00000527619 FAM227BQ96M60 508 aa8.47□□□□□ -1.05
SOX6-208ENST00000527619 PICK1Q9NRD5 415 aa8.47□□□□□ -1.05
SOX6-208ENST00000527619 TMOD4Q9NZQ9 345 aa8.47□□□□□ -1.05
SOX6-208ENST00000527619 CACNA1FO60840 1977 aa8.46□□□□□ -1.05
SOX6-208ENST00000527619 CDHR2Q9BYE9 1310 aa8.46□□□□□ -1.05
SOX6-208ENST00000527619 PARNO95453 639 aaKnown RBP8.46□□□□□ -1.06
SOX6-208ENST00000527619 RHOXF2BP0C7M4 288 aa8.46□□□□□ -1.06
SOX6-208ENST00000527619 NAT2P11245 290 aa8.46□□□□□ -1.06
SOX6-208ENST00000527619 GPTP24298 496 aa8.46□□□□□ -1.06
SOX6-208ENST00000527619 PRPHP41219 470 aa8.46□□□□□ -1.06
SOX6-208ENST00000527619 CCT5P48643 541 aa8.46□□□□□ -1.06
SOX6-208ENST00000527619 NEDD9Q14511 834 aa8.46□□□□□ -1.06
SOX6-208ENST00000527619 KRT32Q14532 448 aa8.46□□□□□ -1.06
SOX6-208ENST00000527619 RRS1Q15050 365 aaKnown RBP8.46□□□□□ -1.06
SOX6-208ENST00000527619 SKIDA1Q1XH10 827 aa8.46□□□□□ -1.06
SOX6-208ENST00000527619 INF2Q27J81 1249 aa8.46□□□□□ -1.06
SOX6-208ENST00000527619 TRIM42Q8IWZ5 723 aa8.46□□□□□ -1.06
SOX6-208ENST00000527619 IQCF2Q8IXL9 164 aa8.46□□□□□ -1.06
SOX6-208ENST00000527619 SMCR8Q8TEV9 937 aaPredicted RBP8.46□□□□□ -1.06
SOX6-208ENST00000527619 SMARCC1Q92922 1105 aaPredicted RBP8.46□□□□□ -1.06
SOX6-208ENST00000527619 CABS1Q96KC9 395 aa8.46□□□□□ -1.06
SOX6-208ENST00000527619 RHOXF2Q9BQY4 288 aa8.46□□□□□ -1.06
SOX6-208ENST00000527619 JPH2Q9BR39 696 aaPredicted RBP8.46□□□□□ -1.06
SOX6-208ENST00000527619 LMCD1Q9NZU5 365 aa8.46□□□□□ -1.06
SOX6-208ENST00000527619 TAF6LQ9Y6J9 622 aa8.46□□□□□ -1.06
SOX6-208ENST00000527619 SHTN1A0MZ66 631 aa8.46□□□□□ -1.06
SOX6-208ENST00000527619 CREB3O43889 395 aa8.46□□□□□ -1.06
SOX6-208ENST00000527619 PDE6BP35913 854 aa8.46□□□□□ -1.06
SOX6-208ENST00000527619 PEX19P40855 299 aa8.46□□□□□ -1.06
SOX6-208ENST00000527619 SCRN1Q12765 414 aa8.46□□□□□ -1.06
SOX6-208ENST00000527619 MTX1Q13505 466 aa8.46□□□□□ -1.06
SOX6-208ENST00000527619 PDIA5Q14554 519 aa8.46□□□□□ -1.06
SOX6-208ENST00000527619 CRYMQ14894 314 aa8.46□□□□□ -1.06
SOX6-208ENST00000527619 CLEC4GQ6UXB4 293 aa8.46□□□□□ -1.06
SOX6-208ENST00000527619 ANKLE2Q86XL3 938 aa8.46□□□□□ -1.06
SOX6-208ENST00000527619 NME9Q86XW9 330 aa8.46□□□□□ -1.06
SOX6-208ENST00000527619 CACTIN-AS1Q8N1I8 211 aa8.46□□□□□ -1.06
SOX6-208ENST00000527619 CLASRPQ8N2M8 674 aaKnown RBP8.46□□□□□ -1.06
SOX6-208ENST00000527619 PDILTQ8N807 584 aa8.46□□□□□ -1.06
SOX6-208ENST00000527619 IGSF22Q8N9C0 903 aa8.46□□□□□ -1.06
SOX6-208ENST00000527619 SIL1Q9H173 461 aa8.46□□□□□ -1.06
SOX6-208ENST00000527619 MRPL44Q9H9J2 332 aaKnown RBP8.46□□□□□ -1.06
SOX6-208ENST00000527619 RTEL1Q9NZ71 1219 aa8.46□□□□□ -1.06
SOX6-208ENST00000527619 ABCF2Q9UG63 623 aa8.46□□□□□ -1.06
SOX6-208ENST00000527619 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.46□□□□□ -1.06
SOX6-208ENST00000527619 NCKAP5LQ9HCH0 1330 aa8.45□□□□□ -1.06
SOX6-208ENST00000527619 NUTM2FA1L443 756 aa8.45□□□□□ -1.06
SOX6-208ENST00000527619 KIF5CO60282 957 aa8.45□□□□□ -1.06
SOX6-208ENST00000527619 CCDC175P0C221 793 aa8.45□□□□□ -1.06
SOX6-208ENST00000527619 PECAM1P16284 738 aaPredicted RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms