RNA–Protein interactions for RNA: ENST00000527413.1

SSSCA1-204, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2

Gene SSSCA1, Length 532 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-204ENST00000527413 ADGRA2Q96PE1 1338 aa16.62■□□□□ 0.25
SSSCA1-204ENST00000527413 IDH1O75874 414 aaKnown RBP16.61■□□□□ 0.25
SSSCA1-204ENST00000527413 SIRT2Q8IXJ6 389 aa16.61■□□□□ 0.25
SSSCA1-204ENST00000527413 KIF1BPQ96EK5 621 aa16.61■□□□□ 0.25
SSSCA1-204ENST00000527413 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.61■□□□□ 0.25
SSSCA1-204ENST00000527413 FLT1P17948 1338 aa16.61■□□□□ 0.25
SSSCA1-204ENST00000527413 APBB1O00213 710 aa16.6■□□□□ 0.25
SSSCA1-204ENST00000527413 CYP7A1P22680 504 aa16.6■□□□□ 0.25
SSSCA1-204ENST00000527413 LACTBP83111 547 aaPredicted RBP16.6■□□□□ 0.25
SSSCA1-204ENST00000527413 KIF22Q14807 665 aa16.6■□□□□ 0.25
SSSCA1-204ENST00000527413 C20orf194Q5TEA3 1177 aa16.6■□□□□ 0.25
SSSCA1-204ENST00000527413 GPAT2Q6NUI2 795 aa16.6■□□□□ 0.25
SSSCA1-204ENST00000527413 C17orf99Q6UX52 265 aa16.6■□□□□ 0.25
SSSCA1-204ENST00000527413 CCDC84Q86UT8 332 aaPredicted RBP16.6■□□□□ 0.25
SSSCA1-204ENST00000527413 MAPKAPK5Q8IW41 473 aa16.6■□□□□ 0.25
SSSCA1-204ENST00000527413 CLASRPQ8N2M8 674 aaKnown RBP16.6■□□□□ 0.25
SSSCA1-204ENST00000527413 TGFBRAP1Q8WUH2 860 aa16.6■□□□□ 0.25
SSSCA1-204ENST00000527413 PARK7Q99497 189 aaKnown RBP16.6■□□□□ 0.25
SSSCA1-204ENST00000527413 ARHGAP39Q9C0H5 1083 aa16.6■□□□□ 0.25
SSSCA1-204ENST00000527413 DHX36Q9H2U1 1008 aaKnown RBP16.6■□□□□ 0.25
SSSCA1-204ENST00000527413 CPA4Q9UI42 421 aa16.6■□□□□ 0.25
SSSCA1-204ENST00000527413 HERC5Q9UII4 1024 aaKnown RBP16.6■□□□□ 0.25
SSSCA1-204ENST00000527413 PDE3AQ14432 1141 aa16.59■□□□□ 0.25
SSSCA1-204ENST00000527413 GADL1Q6ZQY3 521 aa16.59■□□□□ 0.25
SSSCA1-204ENST00000527413 FASTKD5Q7L8L6 764 aaKnown RBP16.59■□□□□ 0.25
SSSCA1-204ENST00000527413 ANTXR1Q9H6X2 564 aa16.59■□□□□ 0.25
SSSCA1-204ENST00000527413 PDE4DIPQ5VU43 2346 aa16.58■□□□□ 0.25
SSSCA1-204ENST00000527413 TRIM75PA6NK02 468 aa16.58■□□□□ 0.24
SSSCA1-204ENST00000527413 DYNLL1P63167 89 aaKnown RBP16.58■□□□□ 0.24
SSSCA1-204ENST00000527413 MAGEB6Q8N7X4 407 aa16.58■□□□□ 0.24
SSSCA1-204ENST00000527413 ARMC5Q96C12 935 aa16.58■□□□□ 0.24
SSSCA1-204ENST00000527413 PI4KBQ9UBF8 816 aa16.58■□□□□ 0.24
SSSCA1-204ENST00000527413 PTCH2Q9Y6C5 1203 aa16.58■□□□□ 0.24
SSSCA1-204ENST00000527413 RAB11FIP3O75154 756 aa16.57■□□□□ 0.24
SSSCA1-204ENST00000527413 CYP2C8P10632 490 aa16.57■□□□□ 0.24
SSSCA1-204ENST00000527413 CAP2P40123 477 aa16.57■□□□□ 0.24
SSSCA1-204ENST00000527413 MAP3K12Q12852 859 aa16.57■□□□□ 0.24
SSSCA1-204ENST00000527413 RRP1BQ14684 758 aaKnown RBP16.57■□□□□ 0.24
SSSCA1-204ENST00000527413 TMED8Q6PL24 325 aaPredicted RBP16.57■□□□□ 0.24
SSSCA1-204ENST00000527413 CERS3Q8IU89 383 aa16.57■□□□□ 0.24
SSSCA1-204ENST00000527413 MIGA1Q8NAN2 632 aa16.57■□□□□ 0.24
SSSCA1-204ENST00000527413 SLC45A1Q9Y2W3 748 aa16.57■□□□□ 0.24
SSSCA1-204ENST00000527413 KIAA0100Q14667 2235 aaKnown RBP16.57■□□□□ 0.24
SSSCA1-204ENST00000527413 MYH8P13535 1937 aa16.57■□□□□ 0.24
SSSCA1-204ENST00000527413 GNRH1P01148 92 aa16.56■□□□□ 0.24
SSSCA1-204ENST00000527413 IFIT2P09913 472 aaKnown RBP16.56■□□□□ 0.24
SSSCA1-204ENST00000527413 TTF1Q15361 905 aaPredicted RBP16.56■□□□□ 0.24
SSSCA1-204ENST00000527413 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.56■□□□□ 0.24
SSSCA1-204ENST00000527413 TBC1D2Q9BYX2 928 aa16.56■□□□□ 0.24
SSSCA1-204ENST00000527413 DNAJC18Q9H819 358 aa16.56■□□□□ 0.24
SSSCA1-204ENST00000527413 PALD1Q9ULE6 856 aa16.56■□□□□ 0.24
SSSCA1-204ENST00000527413 ECM2O94769 699 aaPredicted RBP16.55■□□□□ 0.24
SSSCA1-204ENST00000527413 HLA-DOAP06340 250 aa16.55■□□□□ 0.24
SSSCA1-204ENST00000527413 BCRP11274 1271 aa16.55■□□□□ 0.24
SSSCA1-204ENST00000527413 CTGFP29279 349 aa16.55■□□□□ 0.24
SSSCA1-204ENST00000527413 SLC9C1Q4G0N8 1177 aa16.55■□□□□ 0.24
SSSCA1-204ENST00000527413 METTL16Q86W50 562 aaKnown RBP16.55■□□□□ 0.24
SSSCA1-204ENST00000527413 CRACR2BQ8N4Y2 399 aaPredicted RBP16.55■□□□□ 0.24
SSSCA1-204ENST00000527413 ZNF280CQ8ND82 737 aa16.55■□□□□ 0.24
SSSCA1-204ENST00000527413 ZNF333Q96JL9 665 aa16.55■□□□□ 0.24
SSSCA1-204ENST00000527413 TRIM34Q9BYJ4 488 aa16.55■□□□□ 0.24
SSSCA1-204ENST00000527413 SAP30BPQ9UHR5 308 aaKnown RBP16.55■□□□□ 0.24
SSSCA1-204ENST00000527413 AGTPBP1Q9UPW5 1226 aa16.55■□□□□ 0.24
SSSCA1-204ENST00000527413 POTEFA5A3E0 1075 aa16.54■□□□□ 0.24
SSSCA1-204ENST00000527413 USP17L5A8MUK1 530 aa16.54■□□□□ 0.24
SSSCA1-204ENST00000527413 PSMC4P43686 418 aa16.54■□□□□ 0.24
SSSCA1-204ENST00000527413 USP5P45974 858 aa16.54■□□□□ 0.24
SSSCA1-204ENST00000527413 PRMT2P55345 433 aa16.54■□□□□ 0.24
SSSCA1-204ENST00000527413 SPP2Q13103 211 aa16.54■□□□□ 0.24
SSSCA1-204ENST00000527413 SLC4A8Q2Y0W8 1093 aa16.54■□□□□ 0.24
SSSCA1-204ENST00000527413 FOXP4Q8IVH2 680 aaPredicted RBP16.54■□□□□ 0.24
SSSCA1-204ENST00000527413 PROCA1Q8NCQ7 364 aaPredicted RBP16.54■□□□□ 0.24
SSSCA1-204ENST00000527413 TRIM47Q96LD4 638 aa16.54■□□□□ 0.24
SSSCA1-204ENST00000527413 DNAJC2Q99543 621 aaKnown RBP16.54■□□□□ 0.24
SSSCA1-204ENST00000527413 BCL11AQ9H165 835 aa16.54■□□□□ 0.24
SSSCA1-204ENST00000527413 BAZ2AQ9UIF9 1905 aaKnown RBP16.53■□□□□ 0.24
SSSCA1-204ENST00000527413 GOLIM4O00461 696 aa16.53■□□□□ 0.24
SSSCA1-204ENST00000527413 ASNSP08243 561 aa16.53■□□□□ 0.24
SSSCA1-204ENST00000527413 TREML2Q5T2D2 321 aa16.53■□□□□ 0.24
SSSCA1-204ENST00000527413 SMCR8Q8TEV9 937 aaPredicted RBP16.53■□□□□ 0.24
SSSCA1-204ENST00000527413 RIOK1Q9BRS2 568 aaKnown RBP16.53■□□□□ 0.24
SSSCA1-204ENST00000527413 AS3MTQ9HBK9 375 aa16.53■□□□□ 0.24
SSSCA1-204ENST00000527413 DOCK3Q8IZD9 2030 aa16.53■□□□□ 0.24
SSSCA1-204ENST00000527413 BRCA2P51587 3418 aa16.52■□□□□ 0.24
SSSCA1-204ENST00000527413 GDF11O95390 407 aa16.52■□□□□ 0.24
SSSCA1-204ENST00000527413 FMNL1O95466 1100 aaPredicted RBP16.52■□□□□ 0.24
SSSCA1-204ENST00000527413 PDE6AP16499 860 aa16.52■□□□□ 0.24
SSSCA1-204ENST00000527413 OSBPP22059 807 aa16.52■□□□□ 0.24
SSSCA1-204ENST00000527413 HMGCS2P54868 508 aa16.52■□□□□ 0.24
SSSCA1-204ENST00000527413 NBPF11Q86T75 865 aa16.52■□□□□ 0.24
SSSCA1-204ENST00000527413 SRRDQ9UH36 339 aa16.52■□□□□ 0.24
SSSCA1-204ENST00000527413 PNMA3Q9UL41 463 aa16.52■□□□□ 0.24
SSSCA1-204ENST00000527413 MYPNQ86TC9 1320 aa16.51■□□□□ 0.23
SSSCA1-204ENST00000527413 MAGEB6P1A0A0J9YX57 407 aa16.51■□□□□ 0.23
SSSCA1-204ENST00000527413 HOXD10P28358 340 aa16.51■□□□□ 0.23
SSSCA1-204ENST00000527413 FCGRTP55899 365 aa16.51■□□□□ 0.23
SSSCA1-204ENST00000527413 JAG1P78504 1218 aa16.51■□□□□ 0.23
SSSCA1-204ENST00000527413 SHROOM1Q2M3G4 852 aaPredicted RBP16.51■□□□□ 0.23
SSSCA1-204ENST00000527413 SH3D19Q5HYK7 790 aa16.51■□□□□ 0.23
SSSCA1-204ENST00000527413 SLC9C2Q5TAH2 1124 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms