RNA–Protein interactions for RNA: ENST00000526645.5

CTSB-212, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-212ENST00000526645 DENND2AQ9ULE3 1009 aa13.48□□□□□ -0.25
CTSB-212ENST00000526645 DDTLA6NHG4 134 aaPredicted RBP13.47□□□□□ -0.25
CTSB-212ENST00000526645 EYA2O00167 538 aa13.47□□□□□ -0.25
CTSB-212ENST00000526645 MDM2Q00987 491 aaPredicted RBP13.47□□□□□ -0.25
CTSB-212ENST00000526645 KLHDC4Q8TBB5 520 aa13.47□□□□□ -0.25
CTSB-212ENST00000526645 NUDT12Q9BQG2 462 aa13.47□□□□□ -0.25
CTSB-212ENST00000526645 ASCC2Q9H1I8 757 aaPredicted RBP13.47□□□□□ -0.25
CTSB-212ENST00000526645 FBXO3Q9UK99 471 aa13.47□□□□□ -0.25
CTSB-212ENST00000526645 ATAD5Q96QE3 1844 aa13.47□□□□□ -0.25
CTSB-212ENST00000526645 FRMPD3Q5JV73 1810 aa13.46□□□□□ -0.25
CTSB-212ENST00000526645 NPM3O75607 178 aaKnown RBP13.46□□□□□ -0.25
CTSB-212ENST00000526645 ZKSCAN1P17029 563 aaPredicted RBP13.46□□□□□ -0.25
CTSB-212ENST00000526645 SPP2Q13103 211 aa13.46□□□□□ -0.25
CTSB-212ENST00000526645 PDE3AQ14432 1141 aa13.46□□□□□ -0.25
CTSB-212ENST00000526645 LRRC26Q2I0M4 334 aa13.46□□□□□ -0.25
CTSB-212ENST00000526645 SH3D19Q5HYK7 790 aa13.46□□□□□ -0.25
CTSB-212ENST00000526645 DZIP1Q86YF9 867 aaKnown RBP13.46□□□□□ -0.25
CTSB-212ENST00000526645 SYMPKQ92797 1274 aaKnown RBP13.46□□□□□ -0.25
CTSB-212ENST00000526645 FAM163AQ96GL9 167 aaPredicted RBP13.46□□□□□ -0.25
CTSB-212ENST00000526645 AS3MTQ9HBK9 375 aa13.46□□□□□ -0.25
CTSB-212ENST00000526645 PDS5AQ29RF7 1337 aaKnown RBP13.45□□□□□ -0.26
CTSB-212ENST00000526645 MAP4K4O95819 1239 aaPredicted RBP13.45□□□□□ -0.26
CTSB-212ENST00000526645 CYP2B6P20813 491 aa13.45□□□□□ -0.26
CTSB-212ENST00000526645 MAPK4P31152 587 aa13.45□□□□□ -0.26
CTSB-212ENST00000526645 HMGCS2P54868 508 aa13.45□□□□□ -0.26
CTSB-212ENST00000526645 IRX3P78415 501 aaPredicted RBP13.45□□□□□ -0.26
CTSB-212ENST00000526645 PICALMQ13492 652 aa13.45□□□□□ -0.26
CTSB-212ENST00000526645 ATP2B3Q16720 1220 aa13.45□□□□□ -0.26
CTSB-212ENST00000526645 CCDC84Q86UT8 332 aaPredicted RBP13.45□□□□□ -0.26
CTSB-212ENST00000526645 MAFAQ8NHW3 353 aaPredicted RBP13.45□□□□□ -0.26
CTSB-212ENST00000526645 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.45□□□□□ -0.263e-7■□□□□ 9.8
CTSB-212ENST00000526645 DDX4Q9NQI0 724 aaKnown RBP13.45□□□□□ -0.26
CTSB-212ENST00000526645 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.45□□□□□ -0.26
CTSB-212ENST00000526645 MROH7-TTC4A0A0A0MT08 1334 aa13.44□□□□□ -0.26
CTSB-212ENST00000526645 LTBP2Q14767 1821 aa13.44□□□□□ -0.26
CTSB-212ENST00000526645 USP17L5A8MUK1 530 aa13.44□□□□□ -0.26
CTSB-212ENST00000526645 CACNB2Q08289 660 aaPredicted RBP13.44□□□□□ -0.26
CTSB-212ENST00000526645 SPTY2D1Q68D10 685 aaPredicted RBP13.44□□□□□ -0.26
CTSB-212ENST00000526645 GTF3C2Q8WUA4 911 aaPredicted RBP13.44□□□□□ -0.26
CTSB-212ENST00000526645 FAM161BQ96MY7 647 aa13.44□□□□□ -0.26
CTSB-212ENST00000526645 PRKAG2Q9UGJ0 569 aa13.44□□□□□ -0.26
CTSB-212ENST00000526645 CIAO1O76071 339 aa13.43□□□□□ -0.26
CTSB-212ENST00000526645 RGS2P41220 211 aa13.43□□□□□ -0.26
CTSB-212ENST00000526645 BTDP43251 543 aa13.43□□□□□ -0.26
CTSB-212ENST00000526645 RFX5P48382 616 aaPredicted RBP13.43□□□□□ -0.26
CTSB-212ENST00000526645 LHX8Q68G74 356 aa13.43□□□□□ -0.26
CTSB-212ENST00000526645 GPRC5AQ8NFJ5 357 aa13.43□□□□□ -0.26
CTSB-212ENST00000526645 CDX2Q99626 313 aaPredicted RBP13.43□□□□□ -0.26
CTSB-212ENST00000526645 APBA2Q99767 749 aa13.43□□□□□ -0.26
CTSB-212ENST00000526645 PTPRCP08575 1304 aa13.42□□□□□ -0.26
CTSB-212ENST00000526645 MSCO60682 206 aa13.42□□□□□ -0.26
CTSB-212ENST00000526645 HOXA7P31268 230 aaPredicted RBP13.42□□□□□ -0.26
CTSB-212ENST00000526645 CAP2P40123 477 aa13.42□□□□□ -0.26
CTSB-212ENST00000526645 ATG9AQ7Z3C6 839 aa13.42□□□□□ -0.26
CTSB-212ENST00000526645 CCAR1Q8IX12 1150 aaKnown RBP13.42□□□□□ -0.26
CTSB-212ENST00000526645 USP6NLQ92738 828 aa13.42□□□□□ -0.26
CTSB-212ENST00000526645 TMOD4Q9NZQ9 345 aa13.42□□□□□ -0.26
CTSB-212ENST00000526645 CEP126Q9P2H0 1117 aa13.42□□□□□ -0.26
CTSB-212ENST00000526645 HERC5Q9UII4 1024 aaKnown RBP13.42□□□□□ -0.26
CTSB-212ENST00000526645 SPTBN5Q9NRC6 3674 aaKnown RBP13.42□□□□□ -0.26
CTSB-212ENST00000526645 VCANP13611 3396 aa13.41□□□□□ -0.26
CTSB-212ENST00000526645 GPR75-ASB3A0A0A6YYF3 556 aa13.41□□□□□ -0.26
CTSB-212ENST00000526645 SLURP2P0DP57 97 aa13.41□□□□□ -0.26
CTSB-212ENST00000526645 CCND3P30281 292 aaPredicted RBP13.41□□□□□ -0.26
CTSB-212ENST00000526645 PHKA1P46020 1223 aa13.41□□□□□ -0.26
CTSB-212ENST00000526645 HERVK_113P62684 666 aa13.41□□□□□ -0.26
CTSB-212ENST00000526645 WDR18Q9BV38 432 aa13.41□□□□□ -0.26
CTSB-212ENST00000526645 ABCF2Q9UG63 623 aa13.41□□□□□ -0.26
CTSB-212ENST00000526645 TMEM265A0A087WTH1 108 aa13.4□□□□□ -0.26
CTSB-212ENST00000526645 FAM196BA6NMK8 535 aa13.4□□□□□ -0.26
CTSB-212ENST00000526645 ASNSP08243 561 aa13.4□□□□□ -0.26
CTSB-212ENST00000526645 BACE1P56817 501 aa13.4□□□□□ -0.26
CTSB-212ENST00000526645 RHBDL3P58872 404 aa13.4□□□□□ -0.26
CTSB-212ENST00000526645 SMAD3P84022 425 aaKnown RBP13.4□□□□□ -0.26
CTSB-212ENST00000526645 CCDC102BQ68D86 513 aa13.4□□□□□ -0.26
CTSB-212ENST00000526645 GPR142Q7Z601 462 aa13.4□□□□□ -0.26
CTSB-212ENST00000526645 SENP6Q9GZR1 1112 aaPredicted RBP13.4□□□□□ -0.26
CTSB-212ENST00000526645 USP44Q9H0E7 712 aa13.4□□□□□ -0.26
CTSB-212ENST00000526645 SEMA6BQ9H3T3 888 aa13.4□□□□□ -0.26
CTSB-212ENST00000526645 C19orf81C9J6K1 198 aa13.39□□□□□ -0.27
CTSB-212ENST00000526645 DNM1LO00429 736 aa13.39□□□□□ -0.27
CTSB-212ENST00000526645 GLRX3O76003 335 aaKnown RBP13.39□□□□□ -0.27
CTSB-212ENST00000526645 FOSL2P15408 326 aa13.39□□□□□ -0.27
CTSB-212ENST00000526645 IL15P40933 162 aaPredicted RBP13.39□□□□□ -0.27
CTSB-212ENST00000526645 ERVK-9P63128 1117 aa13.39□□□□□ -0.27
CTSB-212ENST00000526645 ERVK-24P63145 666 aa13.39□□□□□ -0.27
CTSB-212ENST00000526645 GSTO1P78417 241 aa13.39□□□□□ -0.27
CTSB-212ENST00000526645 MTMR2Q13614 643 aa13.39□□□□□ -0.27
CTSB-212ENST00000526645 RASGRF1Q13972 1273 aa13.39□□□□□ -0.27
CTSB-212ENST00000526645 MORN1Q5T089 497 aa13.39□□□□□ -0.27
CTSB-212ENST00000526645 MFSD14CQ5VZR4 134 aa13.39□□□□□ -0.27
CTSB-212ENST00000526645 PLEKHH3Q7Z736 793 aa13.39□□□□□ -0.27
CTSB-212ENST00000526645 CWC22Q9HCG8 908 aaKnown RBP13.39□□□□□ -0.27
CTSB-212ENST00000526645 TXNRD2Q9NNW7 524 aa13.39□□□□□ -0.27
CTSB-212ENST00000526645 GINM1Q9NU53 330 aa13.39□□□□□ -0.27
CTSB-212ENST00000526645 LDHCP07864 332 aa13.38□□□□□ -0.27
CTSB-212ENST00000526645 MECOMQ03112 1051 aa13.38□□□□□ -0.27
CTSB-212ENST00000526645 MAP2K5Q13163 448 aa13.38□□□□□ -0.27
CTSB-212ENST00000526645 CCL14Q16627 93 aa13.38□□□□□ -0.27
CTSB-212ENST00000526645 ERICH6Q7L0X2 663 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms