RNA–Protein interactions for RNA: ENST00000526606.1

AMBRA1-205, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 4

Gene AMBRA1, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-205ENST00000526606 TBC1D12O60347 775 aa24.43■■□□□ 1.5
AMBRA1-205ENST00000526606 RRP1BQ14684 758 aaKnown RBP24.43■■□□□ 1.5
AMBRA1-205ENST00000526606 FAM163AQ96GL9 167 aaPredicted RBP24.43■■□□□ 1.5
AMBRA1-205ENST00000526606 ASCC2Q9H1I8 757 aaPredicted RBP24.43■■□□□ 1.5
AMBRA1-205ENST00000526606 LOC285556D6RIA3 1793 aa24.43■■□□□ 1.5
AMBRA1-205ENST00000526606 PEX10O60683 326 aa24.42■■□□□ 1.5
AMBRA1-205ENST00000526606 FAM109BQ6ICB4 259 aaPredicted RBP24.42■■□□□ 1.5
AMBRA1-205ENST00000526606 DENND2AQ9ULE3 1009 aa24.42■■□□□ 1.5
AMBRA1-205ENST00000526606 ZBTB22O15209 634 aa24.41■■□□□ 1.5
AMBRA1-205ENST00000526606 PRKAR2AP13861 404 aaKnown RBP24.41■■□□□ 1.5
AMBRA1-205ENST00000526606 CYP2B6P20813 491 aa24.41■■□□□ 1.5
AMBRA1-205ENST00000526606 HMGCS2P54868 508 aa24.41■■□□□ 1.5
AMBRA1-205ENST00000526606 RHBDL3P58872 404 aa24.41■■□□□ 1.5
AMBRA1-205ENST00000526606 MDM2Q00987 491 aaPredicted RBP24.41■■□□□ 1.5
AMBRA1-205ENST00000526606 PICALMQ13492 652 aa24.41■■□□□ 1.5
AMBRA1-205ENST00000526606 ATP2B3Q16720 1220 aa24.41■■□□□ 1.5
AMBRA1-205ENST00000526606 LRRC26Q2I0M4 334 aa24.41■■□□□ 1.5
AMBRA1-205ENST00000526606 LHX8Q68G74 356 aa24.41■■□□□ 1.5
AMBRA1-205ENST00000526606 MRPL50Q8N5N7 158 aaKnown RBP24.41■■□□□ 1.5
AMBRA1-205ENST00000526606 GNL3LQ9NVN8 582 aaKnown RBP24.41■■□□□ 1.5
AMBRA1-205ENST00000526606 MORF4L1Q9UBU8 362 aa24.41■■□□□ 1.5
AMBRA1-205ENST00000526606 MUC3AQ02505 3323 aa24.4■■□□□ 1.5
AMBRA1-205ENST00000526606 COL2A1P02458 1487 aaPredicted RBP24.4■■□□□ 1.5
AMBRA1-205ENST00000526606 SEMA3EO15041 775 aa24.4■■□□□ 1.5
AMBRA1-205ENST00000526606 ZNF280CQ8ND82 737 aa24.4■■□□□ 1.5
AMBRA1-205ENST00000526606 ZNF384Q8TF68 577 aa24.4■■□□□ 1.5
AMBRA1-205ENST00000526606 ADORA1P30542 326 aa24.39■■□□□ 1.49
AMBRA1-205ENST00000526606 BTDP43251 543 aa24.39■■□□□ 1.49
AMBRA1-205ENST00000526606 CACNB2Q08289 660 aaPredicted RBP24.38■■□□□ 1.49
AMBRA1-205ENST00000526606 SH3D19Q5HYK7 790 aa24.38■■□□□ 1.49
AMBRA1-205ENST00000526606 FAM161BQ96MY7 647 aa24.38■■□□□ 1.49
AMBRA1-205ENST00000526606 OSBPL5Q9H0X9 879 aaPredicted RBP24.38■■□□□ 1.49
AMBRA1-205ENST00000526606 SIL1Q9H173 461 aa24.38■■□□□ 1.49
AMBRA1-205ENST00000526606 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.38■■□□□ 1.49
AMBRA1-205ENST00000526606 CCDC102BQ68D86 513 aa24.37■■□□□ 1.49
AMBRA1-205ENST00000526606 USP6NLQ92738 828 aa24.37■■□□□ 1.49
AMBRA1-205ENST00000526606 TXNRD2Q9NNW7 524 aa24.37■■□□□ 1.49
AMBRA1-205ENST00000526606 GPR75-ASB3A0A0A6YYF3 556 aa24.36■■□□□ 1.49
AMBRA1-205ENST00000526606 XRCC5P13010 732 aaKnown RBP24.36■■□□□ 1.49
AMBRA1-205ENST00000526606 CCND3P30281 292 aaPredicted RBP24.36■■□□□ 1.49
AMBRA1-205ENST00000526606 RASGRF1Q13972 1273 aa24.36■■□□□ 1.49
AMBRA1-205ENST00000526606 P2RX7Q99572 595 aaKnown RBP24.36■■□□□ 1.49
AMBRA1-205ENST00000526606 CEP126Q9P2H0 1117 aa24.36■■□□□ 1.49
AMBRA1-205ENST00000526606 NPM3O75607 178 aaKnown RBP24.35■■□□□ 1.49
AMBRA1-205ENST00000526606 CIAO1O76071 339 aa24.35■■□□□ 1.49
AMBRA1-205ENST00000526606 CAP2P40123 477 aa24.35■■□□□ 1.49
AMBRA1-205ENST00000526606 PABPC4Q13310 644 aaKnown RBP eCLIP24.35■■□□□ 1.49
AMBRA1-205ENST00000526606 POTEEQ6S8J3 1075 aa24.35■■□□□ 1.49
AMBRA1-205ENST00000526606 DZIP1Q86YF9 867 aaKnown RBP24.35■■□□□ 1.49
AMBRA1-205ENST00000526606 ABCF2Q9UG63 623 aa24.35■■□□□ 1.49
AMBRA1-205ENST00000526606 ATAD5Q96QE3 1844 aa24.35■■□□□ 1.49
AMBRA1-205ENST00000526606 MROH7-TTC4A0A0A0MT08 1334 aa24.35■■□□□ 1.49
AMBRA1-205ENST00000526606 TTC28Q96AY4 2481 aa24.34■■□□□ 1.49
AMBRA1-205ENST00000526606 CCL14Q16627 93 aa24.34■■□□□ 1.49
AMBRA1-205ENST00000526606 ZGPATQ8N5A5 531 aaKnown RBP24.34■■□□□ 1.49
AMBRA1-205ENST00000526606 NUDT12Q9BQG2 462 aa24.34■■□□□ 1.49
AMBRA1-205ENST00000526606 FBXO3Q9UK99 471 aa24.34■■□□□ 1.49
AMBRA1-205ENST00000526606 JAG1P78504 1218 aa24.33■■□□□ 1.49
AMBRA1-205ENST00000526606 MECOMQ03112 1051 aa24.33■■□□□ 1.49
AMBRA1-205ENST00000526606 Q3C1V9 767 aa24.33■■□□□ 1.49
AMBRA1-205ENST00000526606 RBPJLQ9UBG7 517 aa24.33■■□□□ 1.49
AMBRA1-205ENST00000526606 PTPRCP08575 1304 aa24.33■■□□□ 1.48
AMBRA1-205ENST00000526606 USP17L5A8MUK1 530 aa24.32■■□□□ 1.48
AMBRA1-205ENST00000526606 HOXA7P31268 230 aaPredicted RBP24.32■■□□□ 1.48
AMBRA1-205ENST00000526606 TIMM10P62072 90 aa24.32■■□□□ 1.48
AMBRA1-205ENST00000526606 TBC1D2Q9BYX2 928 aa24.32■■□□□ 1.48
AMBRA1-205ENST00000526606 SLF2Q8IX21 1173 aa24.31■■□□□ 1.48
AMBRA1-205ENST00000526606 PA2G4Q9UQ80 394 aaKnown RBP24.31■■□□□ 1.48
AMBRA1-205ENST00000526606 PDS5AQ29RF7 1337 aaKnown RBP24.31■■□□□ 1.48
AMBRA1-205ENST00000526606 MORN1Q5T089 497 aa24.3■■□□□ 1.48
AMBRA1-205ENST00000526606 GPRC5AQ8NFJ5 357 aa24.3■■□□□ 1.48
AMBRA1-205ENST00000526606 SOCS4Q8WXH5 440 aa24.3■■□□□ 1.48
AMBRA1-205ENST00000526606 WDR18Q9BV38 432 aa24.3■■□□□ 1.48
AMBRA1-205ENST00000526606 PORCNQ9H237 461 aa24.3■■□□□ 1.48
AMBRA1-205ENST00000526606 ZKSCAN1P17029 563 aaPredicted RBP24.29■■□□□ 1.48
AMBRA1-205ENST00000526606 IL15P40933 162 aaPredicted RBP24.29■■□□□ 1.48
AMBRA1-205ENST00000526606 BACE1P56817 501 aa24.29■■□□□ 1.48
AMBRA1-205ENST00000526606 HERVK_113P62684 666 aa24.29■■□□□ 1.48
AMBRA1-205ENST00000526606 MTMR2Q13614 643 aa24.29■■□□□ 1.48
AMBRA1-205ENST00000526606 CDX2Q99626 313 aaPredicted RBP24.29■■□□□ 1.48
AMBRA1-205ENST00000526606 MRS2Q9HD23 443 aa24.29■■□□□ 1.48
AMBRA1-205ENST00000526606 IRX3P78415 501 aaPredicted RBP24.28■■□□□ 1.48
AMBRA1-205ENST00000526606 SHROOM1Q2M3G4 852 aaPredicted RBP24.28■■□□□ 1.48
AMBRA1-205ENST00000526606 SPTY2D1Q68D10 685 aaPredicted RBP24.28■■□□□ 1.48
AMBRA1-205ENST00000526606 TRMT44Q8IYL2 757 aaKnown RBP24.28■■□□□ 1.48
AMBRA1-205ENST00000526606 SSH1Q8WYL5 1049 aa24.28■■□□□ 1.48
AMBRA1-205ENST00000526606 PRDM6Q9NQX0 595 aa24.28■■□□□ 1.48
AMBRA1-205ENST00000526606 GPR142Q7Z601 462 aa24.27■■□□□ 1.48
AMBRA1-205ENST00000526606 SENP6Q9GZR1 1112 aaPredicted RBP24.27■■□□□ 1.48
AMBRA1-205ENST00000526606 SIPA1L1O43166 1804 aa24.26■■□□□ 1.47
AMBRA1-205ENST00000526606 FRMPD3Q5JV73 1810 aa24.26■■□□□ 1.47
AMBRA1-205ENST00000526606 MAPK4P31152 587 aa24.26■■□□□ 1.47
AMBRA1-205ENST00000526606 ERICH6Q7L0X2 663 aa24.26■■□□□ 1.47
AMBRA1-205ENST00000526606 NSUN4Q96CB9 384 aaKnown RBP24.26■■□□□ 1.47
AMBRA1-205ENST00000526606 SEMA6BQ9H3T3 888 aa24.26■■□□□ 1.47
AMBRA1-205ENST00000526606 AS3MTQ9HBK9 375 aa24.26■■□□□ 1.47
AMBRA1-205ENST00000526606 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.26■■□□□ 1.47
AMBRA1-205ENST00000526606 MAST2Q6P0Q8 1798 aa24.26■■□□□ 1.47
AMBRA1-205ENST00000526606 ERVK-9P63128 1117 aa24.25■■□□□ 1.47
AMBRA1-205ENST00000526606 ERVK-24P63145 666 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms