RNA–Protein interactions for RNA: ENST00000526080.1

PTPRU-209, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 424 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-209ENST00000526080 OGDHLQ9ULD0 1010 aa17.21■□□□□ 0.35
PTPRU-209ENST00000526080 NPM3O75607 178 aaKnown RBP17.2■□□□□ 0.34
PTPRU-209ENST00000526080 ADORA1P30542 326 aa17.2■□□□□ 0.34
PTPRU-209ENST00000526080 BTDP43251 543 aa17.2■□□□□ 0.34
PTPRU-209ENST00000526080 MAGEA10P43363 369 aaPredicted RBP17.2■□□□□ 0.34
PTPRU-209ENST00000526080 GCLCP48506 637 aaPredicted RBP17.2■□□□□ 0.34
PTPRU-209ENST00000526080 RASGRF1Q13972 1273 aa17.2■□□□□ 0.34
PTPRU-209ENST00000526080 MAP3K21Q5TCX8 1036 aa17.2■□□□□ 0.34
PTPRU-209ENST00000526080 CCDC102BQ68D86 513 aa17.2■□□□□ 0.34
PTPRU-209ENST00000526080 TDHQ8IZJ6 230 aa17.2■□□□□ 0.34
PTPRU-209ENST00000526080 ZNF384Q8TF68 577 aa17.2■□□□□ 0.34
PTPRU-209ENST00000526080 SIL1Q9H173 461 aa17.2■□□□□ 0.34
PTPRU-209ENST00000526080 MTMR10Q9NXD2 777 aa17.2■□□□□ 0.34
PTPRU-209ENST00000526080 MROH7-TTC4A0A0A0MT08 1334 aa17.2■□□□□ 0.34
PTPRU-209ENST00000526080 PFASO15067 1338 aa17.2■□□□□ 0.34
PTPRU-209ENST00000526080 PICALMQ13492 652 aa17.19■□□□□ 0.34
PTPRU-209ENST00000526080 DZIP1Q86YF9 867 aaKnown RBP17.19■□□□□ 0.34
PTPRU-209ENST00000526080 SSH1Q8WYL5 1049 aa17.19■□□□□ 0.34
PTPRU-209ENST00000526080 TRIB2Q92519 343 aa17.19■□□□□ 0.34
PTPRU-209ENST00000526080 OSBPL5Q9H0X9 879 aaPredicted RBP17.19■□□□□ 0.34
PTPRU-209ENST00000526080 C11orf49Q9H6J7 331 aa17.19■□□□□ 0.34
PTPRU-209ENST00000526080 HMX1Q9NP08 348 aaPredicted RBP17.19■□□□□ 0.34
PTPRU-209ENST00000526080 CEP126Q9P2H0 1117 aa17.19■□□□□ 0.34
PTPRU-209ENST00000526080 MORF4L1Q9UBU8 362 aa17.19■□□□□ 0.34
PTPRU-209ENST00000526080 MUC3AQ02505 3323 aa17.18■□□□□ 0.34
PTPRU-209ENST00000526080 GPR75-ASB3A0A0A6YYF3 556 aa17.18■□□□□ 0.34
PTPRU-209ENST00000526080 FAM196BA6NMK8 535 aa17.18■□□□□ 0.34
PTPRU-209ENST00000526080 SYN1P17600 705 aa17.18■□□□□ 0.34
PTPRU-209ENST00000526080 IL15P40933 162 aaPredicted RBP17.18■□□□□ 0.34
PTPRU-209ENST00000526080 SPP2Q13103 211 aa17.18■□□□□ 0.34
PTPRU-209ENST00000526080 SH3D19Q5HYK7 790 aa17.18■□□□□ 0.34
PTPRU-209ENST00000526080 ZNF280CQ8ND82 737 aa17.18■□□□□ 0.34
PTPRU-209ENST00000526080 TBC1D2Q9BYX2 928 aa17.18■□□□□ 0.34
PTPRU-209ENST00000526080 SIPA1L1O43166 1804 aa17.17■□□□□ 0.34
PTPRU-209ENST00000526080 COL6A1P12109 1028 aa17.17■□□□□ 0.34
PTPRU-209ENST00000526080 HMGCS2P54868 508 aa17.17■□□□□ 0.34
PTPRU-209ENST00000526080 RRP1BQ14684 758 aaKnown RBP17.17■□□□□ 0.34
PTPRU-209ENST00000526080 SLF2Q8IX21 1173 aa17.17■□□□□ 0.34
PTPRU-209ENST00000526080 ASCC2Q9H1I8 757 aaPredicted RBP17.17■□□□□ 0.34
PTPRU-209ENST00000526080 PABPC4Q13310 644 aaKnown RBP eCLIP17.16■□□□□ 0.34
PTPRU-209ENST00000526080 MECOMQ03112 1051 aa17.15■□□□□ 0.34
PTPRU-209ENST00000526080 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.15■□□□□ 0.34
PTPRU-209ENST00000526080 COPRSQ9NQ92 184 aa17.15■□□□□ 0.34
PTPRU-209ENST00000526080 ABCF2Q9UG63 623 aa17.15■□□□□ 0.34
PTPRU-209ENST00000526080 PA2G4Q9UQ80 394 aaKnown RBP17.15■□□□□ 0.34
PTPRU-209ENST00000526080 MAP4K4O95819 1239 aaPredicted RBP17.14■□□□□ 0.33
PTPRU-209ENST00000526080 XRCC5P13010 732 aaKnown RBP17.14■□□□□ 0.33
PTPRU-209ENST00000526080 PRKAR2AP13861 404 aaKnown RBP17.14■□□□□ 0.33
PTPRU-209ENST00000526080 CAP2P40123 477 aa17.14■□□□□ 0.33
PTPRU-209ENST00000526080 SPTY2D1Q68D10 685 aaPredicted RBP17.14■□□□□ 0.33
PTPRU-209ENST00000526080 UBE2OQ9C0C9 1292 aaKnown RBP17.14■□□□□ 0.33
PTPRU-209ENST00000526080 MAST2Q6P0Q8 1798 aa17.14■□□□□ 0.33
PTPRU-209ENST00000526080 FRMPD3Q5JV73 1810 aa17.13■□□□□ 0.33
PTPRU-209ENST00000526080 USP17L5A8MUK1 530 aa17.13■□□□□ 0.33
PTPRU-209ENST00000526080 UBTFL1P0CB47 393 aaPredicted RBP17.13■□□□□ 0.33
PTPRU-209ENST00000526080 USP6NLQ92738 828 aa17.13■□□□□ 0.33
PTPRU-209ENST00000526080 NSUN4Q96CB9 384 aaKnown RBP17.13■□□□□ 0.33
PTPRU-209ENST00000526080 COL25A1Q9BXS0 654 aaPredicted RBP17.13■□□□□ 0.33
PTPRU-209ENST00000526080 CYP2B6P20813 491 aa17.12■□□□□ 0.33
PTPRU-209ENST00000526080 HOXA7P31268 230 aaPredicted RBP17.12■□□□□ 0.33
PTPRU-209ENST00000526080 TIMM10P62072 90 aa17.12■□□□□ 0.33
PTPRU-209ENST00000526080 LHX8Q68G74 356 aa17.12■□□□□ 0.33
PTPRU-209ENST00000526080 ERICH6Q7L0X2 663 aa17.12■□□□□ 0.33
PTPRU-209ENST00000526080 SOCS4Q8WXH5 440 aa17.12■□□□□ 0.33
PTPRU-209ENST00000526080 WDR18Q9BV38 432 aa17.12■□□□□ 0.33
PTPRU-209ENST00000526080 TXNRD2Q9NNW7 524 aa17.12■□□□□ 0.33
PTPRU-209ENST00000526080 A0A1B0GUL7 405 aa17.11■□□□□ 0.33
PTPRU-209ENST00000526080 PEX10O60683 326 aa17.11■□□□□ 0.33
PTPRU-209ENST00000526080 LRRC26Q2I0M4 334 aa17.11■□□□□ 0.33
PTPRU-209ENST00000526080 ALDH1L2Q3SY69 923 aa17.11■□□□□ 0.33
PTPRU-209ENST00000526080 XAGE2Q96GT9 111 aa17.11■□□□□ 0.33
PTPRU-209ENST00000526080 GUCD1Q96NT3 240 aa17.11■□□□□ 0.33
PTPRU-209ENST00000526080 HERC5Q9UII4 1024 aaKnown RBP17.11■□□□□ 0.33
PTPRU-209ENST00000526080 POTEB2H3BUK9 544 aa17.1■□□□□ 0.33
PTPRU-209ENST00000526080 BACE1P56817 501 aa17.1■□□□□ 0.33
PTPRU-209ENST00000526080 HERVK_113P62684 666 aa17.1■□□□□ 0.33
PTPRU-209ENST00000526080 JAG1P78504 1218 aa17.1■□□□□ 0.33
PTPRU-209ENST00000526080 CACNB2Q08289 660 aaPredicted RBP17.1■□□□□ 0.33
PTPRU-209ENST00000526080 MTMR2Q13614 643 aa17.1■□□□□ 0.33
PTPRU-209ENST00000526080 FAM109BQ6ICB4 259 aaPredicted RBP17.1■□□□□ 0.33
PTPRU-209ENST00000526080 POTEEQ6S8J3 1075 aa17.1■□□□□ 0.33
PTPRU-209ENST00000526080 P2RX7Q99572 595 aaKnown RBP17.1■□□□□ 0.33
PTPRU-209ENST00000526080 NUDT12Q9BQG2 462 aa17.1■□□□□ 0.33
PTPRU-209ENST00000526080 AS3MTQ9HBK9 375 aa17.1■□□□□ 0.33
PTPRU-209ENST00000526080 HMG20BQ9P0W2 317 aa17.1■□□□□ 0.33
PTPRU-209ENST00000526080 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.1■□□□□ 0.33
PTPRU-209ENST00000526080 E9PSI1 815 aa17.09■□□□□ 0.33
PTPRU-209ENST00000526080 MVPQ14764 893 aaKnown RBP17.09■□□□□ 0.33
PTPRU-209ENST00000526080 MORN1Q5T089 497 aa17.09■□□□□ 0.33
PTPRU-209ENST00000526080 PI16Q6UXB8 463 aa17.09■□□□□ 0.33
PTPRU-209ENST00000526080 METTL16Q86W50 562 aaKnown RBP17.09■□□□□ 0.33
PTPRU-209ENST00000526080 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.09■□□□□ 0.33
PTPRU-209ENST00000526080 TRMT44Q8IYL2 757 aaKnown RBP17.09■□□□□ 0.33
PTPRU-209ENST00000526080 DNAJC18Q9H819 358 aa17.09■□□□□ 0.33
PTPRU-209ENST00000526080 RBPJLQ9UBG7 517 aa17.09■□□□□ 0.33
PTPRU-209ENST00000526080 FOCADQ5VW36 1801 aa17.09■□□□□ 0.33
PTPRU-209ENST00000526080 ZKSCAN1P17029 563 aaPredicted RBP17.08■□□□□ 0.32
PTPRU-209ENST00000526080 CCND3P30281 292 aaPredicted RBP17.08■□□□□ 0.32
PTPRU-209ENST00000526080 MAPK4P31152 587 aa17.08■□□□□ 0.32
PTPRU-209ENST00000526080 IRX3P78415 501 aaPredicted RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms