RNA–Protein interactions for RNA: ENST00000525854.5

HIF3A-209, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-209ENST00000525854 MAPKAPK5Q8IW41 473 aa14.17□□□□□ -0.14
HIF3A-209ENST00000525854 ARMC5Q96C12 935 aa14.17□□□□□ -0.14
HIF3A-209ENST00000525854 CPA4Q9UI42 421 aa14.17□□□□□ -0.14
HIF3A-209ENST00000525854 SLC45A1Q9Y2W3 748 aa14.17□□□□□ -0.14
HIF3A-209ENST00000525854 FLT1P17948 1338 aa14.16□□□□□ -0.14
HIF3A-209ENST00000525854 TRIM75PA6NK02 468 aa14.16□□□□□ -0.14
HIF3A-209ENST00000525854 FAM196BA6NMK8 535 aa14.16□□□□□ -0.14
HIF3A-209ENST00000525854 APBB1O00213 710 aa14.16□□□□□ -0.14
HIF3A-209ENST00000525854 SLURP2P0DP57 97 aa14.16□□□□□ -0.14
HIF3A-209ENST00000525854 CAP2P40123 477 aa14.16□□□□□ -0.14
HIF3A-209ENST00000525854 PRMT2P55345 433 aa14.16□□□□□ -0.14
HIF3A-209ENST00000525854 CAP1Q01518 475 aa14.16□□□□□ -0.14
HIF3A-209ENST00000525854 GPAT2Q6NUI2 795 aa14.16□□□□□ -0.14
HIF3A-209ENST00000525854 GADL1Q6ZQY3 521 aa14.16□□□□□ -0.14
HIF3A-209ENST00000525854 SIRT2Q8IXJ6 389 aa14.16□□□□□ -0.14
HIF3A-209ENST00000525854 MAGEB6Q8N7X4 407 aa14.16□□□□□ -0.14
HIF3A-209ENST00000525854 TRIM34Q9BYJ4 488 aa14.16□□□□□ -0.14
HIF3A-209ENST00000525854 ADGRA2Q96PE1 1338 aa14.15□□□□□ -0.14
HIF3A-209ENST00000525854 MAST2Q6P0Q8 1798 aa14.15□□□□□ -0.14
HIF3A-209ENST00000525854 HLA-DOAP06340 250 aa14.15□□□□□ -0.14
HIF3A-209ENST00000525854 HOXD10P28358 340 aa14.15□□□□□ -0.14
HIF3A-209ENST00000525854 SLC9C1Q4G0N8 1177 aa14.15□□□□□ -0.14
HIF3A-209ENST00000525854 CRACR2BQ8N4Y2 399 aaPredicted RBP14.15□□□□□ -0.14
HIF3A-209ENST00000525854 ZNF280CQ8ND82 737 aa14.15□□□□□ -0.14
HIF3A-209ENST00000525854 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.15□□□□□ -0.14
HIF3A-209ENST00000525854 PTCH2Q9Y6C5 1203 aa14.15□□□□□ -0.14
HIF3A-209ENST00000525854 USP17L5A8MUK1 530 aa14.14□□□□□ -0.15
HIF3A-209ENST00000525854 CYP2C8P10632 490 aa14.14□□□□□ -0.15
HIF3A-209ENST00000525854 PSMC4P43686 418 aa14.14□□□□□ -0.15
HIF3A-209ENST00000525854 USP5P45974 858 aa14.14□□□□□ -0.15
HIF3A-209ENST00000525854 DYNLL1P63167 89 aaKnown RBP14.14□□□□□ -0.15
HIF3A-209ENST00000525854 SPP2Q13103 211 aa14.14□□□□□ -0.15
HIF3A-209ENST00000525854 METTL16Q86W50 562 aaKnown RBP14.14□□□□□ -0.15
HIF3A-209ENST00000525854 MIGA1Q8NAN2 632 aa14.14□□□□□ -0.15
HIF3A-209ENST00000525854 PROCA1Q8NCQ7 364 aaPredicted RBP14.14□□□□□ -0.15
HIF3A-209ENST00000525854 SMCR8Q8TEV9 937 aaPredicted RBP14.14□□□□□ -0.15
HIF3A-209ENST00000525854 ARHGAP39Q9C0H5 1083 aa14.14□□□□□ -0.15
HIF3A-209ENST00000525854 ANTXR1Q9H6X2 564 aa14.14□□□□□ -0.15
HIF3A-209ENST00000525854 AS3MTQ9HBK9 375 aa14.14□□□□□ -0.15
HIF3A-209ENST00000525854 GINM1Q9NU53 330 aa14.14□□□□□ -0.15
HIF3A-209ENST00000525854 PALD1Q9ULE6 856 aa14.14□□□□□ -0.15
HIF3A-209ENST00000525854 AGTPBP1Q9UPW5 1226 aa14.14□□□□□ -0.15
HIF3A-209ENST00000525854 NDUFB9Q9Y6M9 179 aa14.14□□□□□ -0.15
HIF3A-209ENST00000525854 FMNL1O95466 1100 aaPredicted RBP14.13□□□□□ -0.15
HIF3A-209ENST00000525854 ASNSP08243 561 aa14.13□□□□□ -0.15
HIF3A-209ENST00000525854 BCRP11274 1271 aa14.13□□□□□ -0.15
HIF3A-209ENST00000525854 FCGRTP55899 365 aa14.13□□□□□ -0.15
HIF3A-209ENST00000525854 PABPC4Q13310 644 aaKnown RBP eCLIP14.13□□□□□ -0.15
HIF3A-209ENST00000525854 TMEM106CQ9BVX2 250 aa14.13□□□□□ -0.15
HIF3A-209ENST00000525854 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.13□□□□□ -0.15
HIF3A-209ENST00000525854 PNMA3Q9UL41 463 aa14.13□□□□□ -0.15
HIF3A-209ENST00000525854 DOCK1Q14185 1865 aa14.12□□□□□ -0.15
HIF3A-209ENST00000525854 SLC9C2Q5TAH2 1124 aa14.12□□□□□ -0.15
HIF3A-209ENST00000525854 C20orf194Q5TEA3 1177 aa14.12□□□□□ -0.15
HIF3A-209ENST00000525854 CCDC84Q86UT8 332 aaPredicted RBP14.12□□□□□ -0.15
HIF3A-209ENST00000525854 ZNF333Q96JL9 665 aa14.12□□□□□ -0.15
HIF3A-209ENST00000525854 TRIM47Q96LD4 638 aa14.12□□□□□ -0.15
HIF3A-209ENST00000525854 DNAJC2Q99543 621 aaKnown RBP14.12□□□□□ -0.15
HIF3A-209ENST00000525854 WDR18Q9BV38 432 aa14.12□□□□□ -0.15
HIF3A-209ENST00000525854 BCL11AQ9H165 835 aa14.12□□□□□ -0.15
HIF3A-209ENST00000525854 SRRDQ9UH36 339 aa14.12□□□□□ -0.15
HIF3A-209ENST00000525854 SAP30BPQ9UHR5 308 aaKnown RBP14.12□□□□□ -0.15
HIF3A-209ENST00000525854 GOLIM4O00461 696 aa14.11□□□□□ -0.15
HIF3A-209ENST00000525854 RRP1BQ14684 758 aaKnown RBP14.11□□□□□ -0.15
HIF3A-209ENST00000525854 PDE4DIPQ5VU43 2346 aa14.11□□□□□ -0.15
HIF3A-209ENST00000525854 TTC6Q86TZ1 520 aa14.11□□□□□ -0.15
HIF3A-209ENST00000525854 LRRCC1Q9C099 1032 aa14.11□□□□□ -0.15
HIF3A-209ENST00000525854 MAGEB6P1A0A0J9YX57 407 aa14.1□□□□□ -0.15
HIF3A-209ENST00000525854 POTEFA5A3E0 1075 aa14.1□□□□□ -0.15
HIF3A-209ENST00000525854 ECM2O94769 699 aaPredicted RBP14.1□□□□□ -0.15
HIF3A-209ENST00000525854 PDE6AP16499 860 aa14.1□□□□□ -0.15
HIF3A-209ENST00000525854 ATP5JP18859 108 aa14.1□□□□□ -0.15
HIF3A-209ENST00000525854 OSBPP22059 807 aa14.1□□□□□ -0.15
HIF3A-209ENST00000525854 CTGFP29279 349 aa14.1□□□□□ -0.15
HIF3A-209ENST00000525854 HMGCS2P54868 508 aa14.1□□□□□ -0.15
HIF3A-209ENST00000525854 SH3D19Q5HYK7 790 aa14.1□□□□□ -0.15
HIF3A-209ENST00000525854 TREML2Q5T2D2 321 aa14.1□□□□□ -0.15
HIF3A-209ENST00000525854 RAET1EQ8TD07 263 aa14.1□□□□□ -0.15
HIF3A-209ENST00000525854 CRNKL1Q9BZJ0 848 aaKnown RBP14.1□□□□□ -0.15
HIF3A-209ENST00000525854 EHD4Q9H223 541 aa14.1□□□□□ -0.15
HIF3A-209ENST00000525854 DNAJC18Q9H819 358 aa14.1□□□□□ -0.15
HIF3A-209ENST00000525854 TMOD4Q9NZQ9 345 aa14.1□□□□□ -0.15
HIF3A-209ENST00000525854 SERPINB13Q9UIV8 391 aa14.1□□□□□ -0.15
HIF3A-209ENST00000525854 MYPNQ86TC9 1320 aa14.1□□□□□ -0.15
HIF3A-209ENST00000525854 KIAA0100Q14667 2235 aaKnown RBP14.09□□□□□ -0.15
HIF3A-209ENST00000525854 C19orf81C9J6K1 198 aa14.09□□□□□ -0.15
HIF3A-209ENST00000525854 GCLCP48506 637 aaPredicted RBP14.09□□□□□ -0.15
HIF3A-209ENST00000525854 BACE1P56817 501 aa14.09□□□□□ -0.15
HIF3A-209ENST00000525854 SLC4A8Q2Y0W8 1093 aa14.09□□□□□ -0.15
HIF3A-209ENST00000525854 SH3TC2Q8TF17 1288 aa14.09□□□□□ -0.15
HIF3A-209ENST00000525854 RIOK1Q9BRS2 568 aaKnown RBP14.09□□□□□ -0.15
HIF3A-209ENST00000525854 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.09□□□□□ -0.15
HIF3A-209ENST00000525854 PAG1Q9NWQ8 432 aa14.09□□□□□ -0.15
HIF3A-209ENST00000525854 ZBTB21Q9ULJ3 1066 aa14.09□□□□□ -0.15
HIF3A-209ENST00000525854 GDF11O95390 407 aa14.08□□□□□ -0.16
HIF3A-209ENST00000525854 MTMR2Q13614 643 aa14.08□□□□□ -0.16
HIF3A-209ENST00000525854 FAM110CQ1W6H9 321 aa14.08□□□□□ -0.16
HIF3A-209ENST00000525854 ANKRD13CQ8N6S4 541 aa14.08□□□□□ -0.16
HIF3A-209ENST00000525854 HAUS7Q99871 368 aa14.08□□□□□ -0.16
HIF3A-209ENST00000525854 BOLA2Q9H3K6 86 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms