RNA–Protein interactions for RNA: ENST00000525056.1

ATM-206, Transcript of ATM serine/threonine kinase, humanhuman

TSL 3

Gene ATM, Length 657 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-206ENST00000525056 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.9□□□□□ -1.14
ATM-206ENST00000525056 KDM3BQ7LBC6 1761 aa7.89□□□□□ -1.15
ATM-206ENST00000525056 COL5A2P05997 1499 aaPredicted RBP7.89□□□□□ -1.15
ATM-206ENST00000525056 CPDO75976 1380 aa7.89□□□□□ -1.15
ATM-206ENST00000525056 CEMIPQ8WUJ3 1361 aa7.89□□□□□ -1.15
ATM-206ENST00000525056 MAP3K19Q56UN5 1328 aa7.89□□□□□ -1.15
ATM-206ENST00000525056 SLC35F4A4IF30 521 aa7.89□□□□□ -1.15
ATM-206ENST00000525056 A6NJY4 79 aa7.89□□□□□ -1.15
ATM-206ENST00000525056 FAM196BA6NMK8 535 aa7.89□□□□□ -1.15
ATM-206ENST00000525056 SFI1A8K8P3 1242 aa7.89□□□□□ -1.15
ATM-206ENST00000525056 USP17L15C9J2P7 530 aa7.89□□□□□ -1.15
ATM-206ENST00000525056 USP17L10C9JJH3 530 aa7.89□□□□□ -1.15
ATM-206ENST00000525056 USP17L13C9JLJ4 530 aa7.89□□□□□ -1.15
ATM-206ENST00000525056 USP17L12C9JPN9 530 aa7.89□□□□□ -1.15
ATM-206ENST00000525056 USP17L11C9JVI0 530 aa7.89□□□□□ -1.15
ATM-206ENST00000525056 USP17L21D6R901 530 aa7.89□□□□□ -1.15
ATM-206ENST00000525056 USP17L18D6R9N7 530 aa7.89□□□□□ -1.15
ATM-206ENST00000525056 USP17L22D6RA61 530 aa7.89□□□□□ -1.15
ATM-206ENST00000525056 USP17L17D6RBQ6 530 aa7.89□□□□□ -1.15
ATM-206ENST00000525056 USP17L19D6RCP7 530 aa7.89□□□□□ -1.15
ATM-206ENST00000525056 USP17L20D6RJB6 530 aa7.89□□□□□ -1.15
ATM-206ENST00000525056 CDK2AP1O14519 115 aa7.89□□□□□ -1.15
ATM-206ENST00000525056 CSB-PGBD3P0DP91 1061 aa7.89□□□□□ -1.15
ATM-206ENST00000525056 CDC25BP30305 580 aa7.89□□□□□ -1.15
ATM-206ENST00000525056 USP17L24Q0WX57 530 aa7.89□□□□□ -1.15
ATM-206ENST00000525056 MTFR1Q15390 333 aa7.89□□□□□ -1.15
ATM-206ENST00000525056 WDR44Q5JSH3 913 aa7.89□□□□□ -1.15
ATM-206ENST00000525056 GNASQ5JWF2 1037 aa7.89□□□□□ -1.15
ATM-206ENST00000525056 TAS1R3Q7RTX0 852 aa7.89□□□□□ -1.15
ATM-206ENST00000525056 EVI5LQ96CN4 794 aa7.89□□□□□ -1.15
ATM-206ENST00000525056 FAM13BQ9NYF5 915 aa7.89□□□□□ -1.15
ATM-206ENST00000525056 SLIT3O75094 1523 aa7.88□□□□□ -1.15
ATM-206ENST00000525056 ABCC6O95255 1503 aa7.88□□□□□ -1.15
ATM-206ENST00000525056 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.88□□□□□ -1.15
ATM-206ENST00000525056 NRDCO43847 1150 aa7.88□□□□□ -1.15
ATM-206ENST00000525056 SMARCA5O60264 1052 aaPredicted RBP7.88□□□□□ -1.15
ATM-206ENST00000525056 PPFIA3O75145 1194 aa7.88□□□□□ -1.15
ATM-206ENST00000525056 ADCY5O95622 1261 aa7.88□□□□□ -1.15
ATM-206ENST00000525056 AMPHP49418 695 aa7.88□□□□□ -1.15
ATM-206ENST00000525056 SEC13P55735 322 aa7.88□□□□□ -1.15
ATM-206ENST00000525056 MAP3K11Q16584 847 aa7.88□□□□□ -1.15
ATM-206ENST00000525056 MCM10Q7L590 875 aa7.88□□□□□ -1.15
ATM-206ENST00000525056 PTF1AQ7RTS3 328 aa7.88□□□□□ -1.15
ATM-206ENST00000525056 NPAS3Q8IXF0 933 aa7.88□□□□□ -1.15
ATM-206ENST00000525056 TNS4Q8IZW8 715 aa7.88□□□□□ -1.15
ATM-206ENST00000525056 CCDC155Q8N6L0 562 aa7.88□□□□□ -1.15
ATM-206ENST00000525056 RHPN1Q8TCX5 695 aa7.88□□□□□ -1.15
ATM-206ENST00000525056 OTUD7AQ8TE49 926 aaPredicted RBP7.88□□□□□ -1.15
ATM-206ENST00000525056 CAMKK2Q96RR4 588 aa7.88□□□□□ -1.15
ATM-206ENST00000525056 FUCA2Q9BTY2 467 aa7.88□□□□□ -1.15
ATM-206ENST00000525056 LSG1Q9H089 658 aaKnown RBP7.88□□□□□ -1.15
ATM-206ENST00000525056 ZSCAN16Q9H4T2 348 aaPredicted RBP7.88□□□□□ -1.15
ATM-206ENST00000525056 EXOC6BQ9Y2D4 811 aa7.88□□□□□ -1.15
ATM-206ENST00000525056 SNX14Q9Y5W7 946 aa7.88□□□□□ -1.15
ATM-206ENST00000525056 MRC1P22897 1456 aa7.87□□□□□ -1.15
ATM-206ENST00000525056 RGPD3A6NKT7 1758 aaPredicted RBP7.87□□□□□ -1.15
ATM-206ENST00000525056 RGPD4Q7Z3J3 1758 aa7.87□□□□□ -1.15
ATM-206ENST00000525056 GOLGA6L4A6NEF3 574 aa7.87□□□□□ -1.15
ATM-206ENST00000525056 M0R2N6 131 aa7.87□□□□□ -1.15
ATM-206ENST00000525056 SYT1P21579 422 aa7.87□□□□□ -1.15
ATM-206ENST00000525056 PHKA2P46019 1235 aa7.87□□□□□ -1.15
ATM-206ENST00000525056 VEGFBP49765 207 aa7.87□□□□□ -1.15
ATM-206ENST00000525056 DPYDQ12882 1025 aa7.87□□□□□ -1.15
ATM-206ENST00000525056 DCTN1Q14203 1278 aa7.87□□□□□ -1.15
ATM-206ENST00000525056 DDB1Q16531 1140 aa7.87□□□□□ -1.15
ATM-206ENST00000525056 MTHFSDQ2M296 383 aaKnown RBP7.87□□□□□ -1.15
ATM-206ENST00000525056 ANKMY2Q8IV38 441 aa7.87□□□□□ -1.15
ATM-206ENST00000525056 KIAA1524Q8TCG1 905 aa7.87□□□□□ -1.15
ATM-206ENST00000525056 PI4K2BQ8TCG2 481 aa7.87□□□□□ -1.15
ATM-206ENST00000525056 RHBDD1Q8TEB9 315 aa7.87□□□□□ -1.15
ATM-206ENST00000525056 NUP62CLQ9H1M0 184 aa7.87□□□□□ -1.15
ATM-206ENST00000525056 ECHDC1Q9NTX5 307 aa7.87□□□□□ -1.15
ATM-206ENST00000525056 SCHIP1Q9P0W5 487 aaPredicted RBP7.87□□□□□ -1.15
ATM-206ENST00000525056 CFAP45Q9UL16 551 aa7.87□□□□□ -1.15
ATM-206ENST00000525056 IQSEC3Q9UPP2 1182 aaPredicted RBP7.87□□□□□ -1.15
ATM-206ENST00000525056 LRRFIP2Q9Y608 721 aaKnown RBP7.87□□□□□ -1.15
ATM-206ENST00000525056 COL15A1P39059 1388 aa7.86□□□□□ -1.15
ATM-206ENST00000525056 SMTNL1A8MU46 457 aa7.86□□□□□ -1.15
ATM-206ENST00000525056 H3BM21 787 aa7.86□□□□□ -1.15
ATM-206ENST00000525056 SURF6O75683 361 aaKnown RBP7.86□□□□□ -1.15
ATM-206ENST00000525056 DDX58O95786 925 aaKnown RBP7.86□□□□□ -1.15
ATM-206ENST00000525056 HMGB1P09429 215 aaKnown RBP7.86□□□□□ -1.15
ATM-206ENST00000525056 EPHA4P54764 986 aa7.86□□□□□ -1.15
ATM-206ENST00000525056 AK2P54819 239 aa7.86□□□□□ -1.15
ATM-206ENST00000525056 DMTNQ08495 405 aa7.86□□□□□ -1.15
ATM-206ENST00000525056 AMOTQ4VCS5 1084 aa7.86□□□□□ -1.15
ATM-206ENST00000525056 C4orf17Q53FE4 359 aa7.86□□□□□ -1.15
ATM-206ENST00000525056 RBM43Q6ZSC3 357 aaKnown RBP7.86□□□□□ -1.15
ATM-206ENST00000525056 RUFY3Q7L099 469 aa7.86□□□□□ -1.15
ATM-206ENST00000525056 ARHGEF25Q86VW2 580 aa7.86□□□□□ -1.15
ATM-206ENST00000525056 PBXIP1Q96AQ6 731 aa7.86□□□□□ -1.15
ATM-206ENST00000525056 NIFKQ9BYG3 293 aaKnown RBP7.86□□□□□ -1.15
ATM-206ENST00000525056 USP44Q9H0E7 712 aa7.86□□□□□ -1.15
ATM-206ENST00000525056 TIMMDC1Q9NPL8 285 aa7.86□□□□□ -1.15
ATM-206ENST00000525056 KCND1Q9NSA2 647 aa7.86□□□□□ -1.15
ATM-206ENST00000525056 PDRG1Q9NUG6 133 aa7.86□□□□□ -1.15
ATM-206ENST00000525056 HYPKQ9NX55 129 aa7.86□□□□□ -1.15
ATM-206ENST00000525056 CGNQ9P2M7 1197 aaKnown RBP7.86□□□□□ -1.15
ATM-206ENST00000525056 PALD1Q9ULE6 856 aa7.86□□□□□ -1.15
ATM-206ENST00000525056 THRAP3Q9Y2W1 955 aaKnown RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms