RNA–Protein interactions for RNA: ENST00000524523.1

CTR9-202, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene CTR9, Length 902 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-202ENST00000524523 ISY1Q9ULR0 285 aaKnown RBP8.96□□□□□ -0.98
CTR9-202ENST00000524523 NHSQ6T4R5 1651 aa8.96□□□□□ -0.98
CTR9-202ENST00000524523 NUP98P52948 1817 aa8.96□□□□□ -0.98
CTR9-202ENST00000524523 COL5A3P25940 1745 aaPredicted RBP8.95□□□□□ -0.98
CTR9-202ENST00000524523 GOLIM4O00461 696 aa8.95□□□□□ -0.98
CTR9-202ENST00000524523 FRAT2O75474 233 aaPredicted RBP8.95□□□□□ -0.98
CTR9-202ENST00000524523 NR5A1Q13285 461 aa8.95□□□□□ -0.98
CTR9-202ENST00000524523 TRAPPC3LQ5T215 181 aa8.95□□□□□ -0.98
CTR9-202ENST00000524523 PRPF40BQ6NWY9 871 aaKnown RBP8.95□□□□□ -0.98
CTR9-202ENST00000524523 BLOC1S2Q6QNY1 142 aa8.95□□□□□ -0.98
CTR9-202ENST00000524523 SYNE4Q8N205 404 aa8.95□□□□□ -0.98
CTR9-202ENST00000524523 APPBP2Q92624 585 aa8.95□□□□□ -0.98
CTR9-202ENST00000524523 NLRP3Q96P20 1036 aa8.95□□□□□ -0.98
CTR9-202ENST00000524523 DNAJC2Q99543 621 aaKnown RBP8.95□□□□□ -0.98
CTR9-202ENST00000524523 PDRG1Q9NUG6 133 aa8.95□□□□□ -0.98
CTR9-202ENST00000524523 GNL3LQ9NVN8 582 aaKnown RBP8.95□□□□□ -0.98
CTR9-202ENST00000524523 MAP4K5Q9Y4K4 846 aa8.95□□□□□ -0.98
CTR9-202ENST00000524523 PDS5AQ29RF7 1337 aaKnown RBP8.95□□□□□ -0.98
CTR9-202ENST00000524523 RPAP1Q9BWH6 1393 aaPredicted RBP8.95□□□□□ -0.98
CTR9-202ENST00000524523 RIC1Q4ADV7 1423 aa8.95□□□□□ -0.98
CTR9-202ENST00000524523 PLSCR1O15162 318 aa8.94□□□□□ -0.98
CTR9-202ENST00000524523 HCLS1P14317 486 aaPredicted RBP8.94□□□□□ -0.98
CTR9-202ENST00000524523 CASTP20810 708 aaKnown RBP8.94□□□□□ -0.98
CTR9-202ENST00000524523 ALX1Q15699 326 aa8.94□□□□□ -0.98
CTR9-202ENST00000524523 CCDC102BQ68D86 513 aa8.94□□□□□ -0.98
CTR9-202ENST00000524523 ZNF787Q6DD87 383 aa8.94□□□□□ -0.98
CTR9-202ENST00000524523 ANKRD18AQ8IVF6 992 aa8.94□□□□□ -0.98
CTR9-202ENST00000524523 TNPO1Q92973 898 aaKnown RBP8.94□□□□□ -0.98
CTR9-202ENST00000524523 SLC10A4Q96EP9 437 aa8.94□□□□□ -0.98
CTR9-202ENST00000524523 ANKRD2Q9GZV1 360 aa8.94□□□□□ -0.98
CTR9-202ENST00000524523 CDV3Q9UKY7 258 aaKnown RBP8.94□□□□□ -0.98
CTR9-202ENST00000524523 ZMYM6O95789 1325 aa8.94□□□□□ -0.98
CTR9-202ENST00000524523 LRP5O75197 1615 aa8.94□□□□□ -0.98
CTR9-202ENST00000524523 CAPN5O15484 640 aaPredicted RBP8.93□□□□□ -0.98
CTR9-202ENST00000524523 PDCP20941 246 aa8.93□□□□□ -0.98
CTR9-202ENST00000524523 RPS6KB1P23443 525 aa8.93□□□□□ -0.98
CTR9-202ENST00000524523 GTF2E1P29083 439 aaPredicted RBP8.93□□□□□ -0.98
CTR9-202ENST00000524523 RFC4P35249 363 aa8.93□□□□□ -0.98
CTR9-202ENST00000524523 NT5C2P49902 561 aa8.93□□□□□ -0.98
CTR9-202ENST00000524523 RBM6P78332 1123 aaKnown RBP8.93□□□□□ -0.98
CTR9-202ENST00000524523 FKBP4Q02790 459 aaKnown RBP eCLIP8.93□□□□□ -0.98
CTR9-202ENST00000524523 MAP3K12Q12852 859 aa8.93□□□□□ -0.98
CTR9-202ENST00000524523 DDX46Q7L014 1031 aaKnown RBP8.93□□□□□ -0.98
CTR9-202ENST00000524523 KRT27Q7Z3Y8 459 aa8.93□□□□□ -0.98
CTR9-202ENST00000524523 ZNF589Q86UQ0 364 aaPredicted RBP8.93□□□□□ -0.98
CTR9-202ENST00000524523 MTMR14Q8NCE2 650 aa8.93□□□□□ -0.98
CTR9-202ENST00000524523 FLAD1Q8NFF5 587 aa8.93□□□□□ -0.98
CTR9-202ENST00000524523 ADAM32Q8TC27 787 aa8.93□□□□□ -0.98
CTR9-202ENST00000524523 JAKMIP1Q96N16 626 aaKnown RBP8.93□□□□□ -0.98
CTR9-202ENST00000524523 NEK1Q96PY6 1258 aa8.93□□□□□ -0.98
CTR9-202ENST00000524523 AGXT2Q9BYV1 514 aa8.93□□□□□ -0.98
CTR9-202ENST00000524523 PRM3Q9NNZ6 103 aa8.93□□□□□ -0.98
CTR9-202ENST00000524523 ATP6V1DQ9Y5K8 247 aa8.93□□□□□ -0.98
CTR9-202ENST00000524523 NDUFB9Q9Y6M9 179 aa8.93□□□□□ -0.98
CTR9-202ENST00000524523 WDR19Q8NEZ3 1342 aa8.93□□□□□ -0.98
CTR9-202ENST00000524523 WDR33Q9C0J8 1336 aaKnown RBP8.93□□□□□ -0.98
CTR9-202ENST00000524523 CARMIL3Q8ND23 1372 aa8.93□□□□□ -0.98
CTR9-202ENST00000524523 AK9Q5TCS8 1911 aa8.93□□□□□ -0.98
CTR9-202ENST00000524523 MYH14Q7Z406 1995 aaKnown RBP8.92□□□□□ -0.98
CTR9-202ENST00000524523 ZNF804BA4D1E1 1349 aa8.92□□□□□ -0.98
CTR9-202ENST00000524523 BRD1O95696 1058 aa8.92□□□□□ -0.98
CTR9-202ENST00000524523 HSPD1P10809 573 aaKnown RBP8.92□□□□□ -0.98
CTR9-202ENST00000524523 GNAT2P19087 354 aa8.92□□□□□ -0.98
CTR9-202ENST00000524523 ADD2P35612 726 aa8.92□□□□□ -0.98
CTR9-202ENST00000524523 GRM5P41594 1212 aa8.92□□□□□ -0.98
CTR9-202ENST00000524523 ZAP70P43403 619 aa8.92□□□□□ -0.98
CTR9-202ENST00000524523 AK2P54819 239 aa8.92□□□□□ -0.98
CTR9-202ENST00000524523 EVCP57679 992 aa8.92□□□□□ -0.98
CTR9-202ENST00000524523 RPS8P62241 208 aaKnown RBP8.92□□□□□ -0.98
CTR9-202ENST00000524523 TBC1D9BQ66K14 1250 aa8.92□□□□□ -0.98
CTR9-202ENST00000524523 DHX32Q7L7V1 743 aaKnown RBP8.92□□□□□ -0.98
CTR9-202ENST00000524523 TMC4Q7Z404 712 aa8.92□□□□□ -0.98
CTR9-202ENST00000524523 NBPF5PQ86XG9 351 aaPredicted RBP8.92□□□□□ -0.98
CTR9-202ENST00000524523 MTA3Q9BTC8 594 aa8.92□□□□□ -0.98
CTR9-202ENST00000524523 UPF3BQ9BZI7 483 aaKnown RBP8.92□□□□□ -0.98
CTR9-202ENST00000524523 FSHRP23945 695 aa8.91□□□□□ -0.98
CTR9-202ENST00000524523 ADORA1P30542 326 aa8.91□□□□□ -0.98
CTR9-202ENST00000524523 MCAMP43121 646 aa8.91□□□□□ -0.98
CTR9-202ENST00000524523 CHRNDQ07001 517 aa8.91□□□□□ -0.98
CTR9-202ENST00000524523 IMMTQ16891 758 aaKnown RBP8.91□□□□□ -0.98
CTR9-202ENST00000524523 CAVIN4Q5BKX8 364 aa8.91□□□□□ -0.98
CTR9-202ENST00000524523 C15orf52Q6ZUT6 534 aaKnown RBP8.91□□□□□ -0.98
CTR9-202ENST00000524523 SPATA5Q8NB90 893 aa8.91□□□□□ -0.98
CTR9-202ENST00000524523 OSBP2Q969R2 916 aa8.91□□□□□ -0.98
CTR9-202ENST00000524523 EDC3Q96F86 508 aaKnown RBP8.91□□□□□ -0.98
CTR9-202ENST00000524523 OCSTAMPQ9BR26 566 aa8.91□□□□□ -0.98
CTR9-202ENST00000524523 LLPHQ9BRT6 129 aaKnown RBP8.91□□□□□ -0.98
CTR9-202ENST00000524523 DACH1Q9UI36 760 aa8.91□□□□□ -0.98
CTR9-202ENST00000524523 KIF3AQ9Y496 699 aa8.91□□□□□ -0.98
CTR9-202ENST00000524523 MYH3P11055 1940 aa8.91□□□□□ -0.98
CTR9-202ENST00000524523 BCORQ6W2J9 1755 aa8.91□□□□□ -0.98
CTR9-202ENST00000524523 MAST3O60307 1309 aa8.9□□□□□ -0.98
CTR9-202ENST00000524523 KLRG2A4D1S0 409 aaPredicted RBP8.9□□□□□ -0.98
CTR9-202ENST00000524523 ZBBXA8MT70 800 aa8.9□□□□□ -0.98
CTR9-202ENST00000524523 TRAK2O60296 914 aa8.9□□□□□ -0.98
CTR9-202ENST00000524523 BAG4O95429 457 aaKnown RBP8.9□□□□□ -0.98
CTR9-202ENST00000524523 CYP21A2P08686 494 aa8.9□□□□□ -0.98
CTR9-202ENST00000524523 WDR4P57081 412 aaKnown RBP8.9□□□□□ -0.98
CTR9-202ENST00000524523 EXOSC10Q01780 885 aaKnown RBP8.9□□□□□ -0.98
CTR9-202ENST00000524523 ADCK5Q3MIX3 580 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms