RNA–Protein interactions for RNA: ENST00000524516.1

PUM1-213, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 2

Gene PUM1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-213ENST00000524516 TMEM39AQ9NV64 488 aa10.4□□□□□ -0.74
PUM1-213ENST00000524516 APBB1O00213 710 aa10.39□□□□□ -0.75
PUM1-213ENST00000524516 KIAA0355O15063 1070 aa10.39□□□□□ -0.75
PUM1-213ENST00000524516 PQBP1O60828 265 aaKnown RBP10.39□□□□□ -0.75
PUM1-213ENST00000524516 HSPA5P11021 654 aaKnown RBP10.39□□□□□ -0.75
PUM1-213ENST00000524516 MAPK4P31152 587 aa10.39□□□□□ -0.75
PUM1-213ENST00000524516 HDLBPQ00341 1268 aaKnown RBP10.39□□□□□ -0.75
PUM1-213ENST00000524516 PROCA1Q8NCQ7 364 aaPredicted RBP10.39□□□□□ -0.75
PUM1-213ENST00000524516 MFSD14AQ96MC6 490 aa10.39□□□□□ -0.75
PUM1-213ENST00000524516 ZDHHC15Q96MV8 337 aa10.39□□□□□ -0.75
PUM1-213ENST00000524516 ASCC2Q9H1I8 757 aaPredicted RBP10.39□□□□□ -0.75
PUM1-213ENST00000524516 USP34Q70CQ2 3546 aa10.39□□□□□ -0.75
PUM1-213ENST00000524516 MYO9BQ13459 2157 aa10.39□□□□□ -0.75
PUM1-213ENST00000524516 UTYO14607 1347 aa10.38□□□□□ -0.75
PUM1-213ENST00000524516 MAPK8IP3Q9UPT6 1336 aa10.38□□□□□ -0.75
PUM1-213ENST00000524516 ZDBF2Q9HCK1 2354 aa10.38□□□□□ -0.75
PUM1-213ENST00000524516 IRX3P78415 501 aaPredicted RBP10.38□□□□□ -0.75
PUM1-213ENST00000524516 CHAF1AQ13111 956 aaPredicted RBP10.38□□□□□ -0.75
PUM1-213ENST00000524516 PPIGQ13427 754 aaKnown RBP eCLIP10.38□□□□□ -0.755e-8■□□□□ 9.4
PUM1-213ENST00000524516 GRIK5Q16478 980 aa10.38□□□□□ -0.75
PUM1-213ENST00000524516 ANO1Q5XXA6 986 aa10.38□□□□□ -0.75
PUM1-213ENST00000524516 HFE2Q6ZVN8 426 aa10.38□□□□□ -0.75
PUM1-213ENST00000524516 TDRD7Q8NHU6 1098 aaKnown RBP10.38□□□□□ -0.75
PUM1-213ENST00000524516 ANKS1AQ92625 1134 aa10.38□□□□□ -0.75
PUM1-213ENST00000524516 BABAM1Q9NWV8 329 aa10.38□□□□□ -0.75
PUM1-213ENST00000524516 MORF4L1Q9UBU8 362 aa10.38□□□□□ -0.75
PUM1-213ENST00000524516 YBX2Q9Y2T7 364 aaKnown RBP10.38□□□□□ -0.75
PUM1-213ENST00000524516 LRRFIP2Q9Y608 721 aaKnown RBP10.38□□□□□ -0.75
PUM1-213ENST00000524516 A0A1B0GUL6 1792 aa10.38□□□□□ -0.75
PUM1-213ENST00000524516 DOCK1Q14185 1865 aa10.38□□□□□ -0.75
PUM1-213ENST00000524516 C5orf42Q9H799 3197 aa10.38□□□□□ -0.75
PUM1-213ENST00000524516 PHIPQ8WWQ0 1821 aa10.37□□□□□ -0.75
PUM1-213ENST00000524516 LOC285556D6RIA3 1793 aa10.37□□□□□ -0.75
PUM1-213ENST00000524516 DCXO43602 365 aa10.37□□□□□ -0.75
PUM1-213ENST00000524516 PLIN1O60240 522 aa10.37□□□□□ -0.75
PUM1-213ENST00000524516 TMEM240Q5SV17 173 aa10.37□□□□□ -0.75
PUM1-213ENST00000524516 C1orf53Q5VUE5 145 aa10.37□□□□□ -0.75
PUM1-213ENST00000524516 APOBEC3HQ6NTF7 200 aaKnown RBP10.37□□□□□ -0.75
PUM1-213ENST00000524516 GPR142Q7Z601 462 aa10.37□□□□□ -0.75
PUM1-213ENST00000524516 CCDC84Q86UT8 332 aaPredicted RBP10.37□□□□□ -0.75
PUM1-213ENST00000524516 SLC44A5Q8NCS7 719 aa10.37□□□□□ -0.75
PUM1-213ENST00000524516 PRSS33Q8NF86 280 aa10.37□□□□□ -0.75
PUM1-213ENST00000524516 GPRC5AQ8NFJ5 357 aa10.37□□□□□ -0.75
PUM1-213ENST00000524516 COL26A1Q96A83 441 aa10.37□□□□□ -0.75
PUM1-213ENST00000524516 MTIF3Q9H2K0 278 aaKnown RBP10.37□□□□□ -0.75
PUM1-213ENST00000524516 SPINK5Q9NQ38 1064 aaPredicted RBP10.37□□□□□ -0.75
PUM1-213ENST00000524516 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.37□□□□□ -0.75
PUM1-213ENST00000524516 MTCH2Q9Y6C9 303 aa10.37□□□□□ -0.75
PUM1-213ENST00000524516 DOCK2Q92608 1830 aa10.37□□□□□ -0.75
PUM1-213ENST00000524516 CHD9Q3L8U1 2897 aa10.36□□□□□ -0.75
PUM1-213ENST00000524516 MAST3O60307 1309 aa10.36□□□□□ -0.75
PUM1-213ENST00000524516 GBF1Q92538 1859 aa10.36□□□□□ -0.75
PUM1-213ENST00000524516 PEX10O60683 326 aa10.36□□□□□ -0.75
PUM1-213ENST00000524516 FRAT2O75474 233 aaPredicted RBP10.36□□□□□ -0.75
PUM1-213ENST00000524516 HIBADHP31937 336 aaKnown RBP10.36□□□□□ -0.75
PUM1-213ENST00000524516 ATP2B2Q01814 1243 aa10.36□□□□□ -0.75
PUM1-213ENST00000524516 MORN1Q5T089 497 aa10.36□□□□□ -0.75
PUM1-213ENST00000524516 PSRC1Q6PGN9 363 aaPredicted RBP10.36□□□□□ -0.75
PUM1-213ENST00000524516 SAMD1Q6SPF0 538 aaPredicted RBP10.36□□□□□ -0.75
PUM1-213ENST00000524516 PLEKHH3Q7Z736 793 aa10.36□□□□□ -0.75
PUM1-213ENST00000524516 USP6NLQ92738 828 aa10.36□□□□□ -0.75
PUM1-213ENST00000524516 METTL22Q9BUU2 404 aaPredicted RBP10.36□□□□□ -0.75
PUM1-213ENST00000524516 ANKRD18BA2A2Z9 1011 aa10.35□□□□□ -0.75
PUM1-213ENST00000524516 PHF20L1A8MW92 1017 aa10.35□□□□□ -0.75
PUM1-213ENST00000524516 PER1O15534 1290 aaPredicted RBP10.35□□□□□ -0.75
PUM1-213ENST00000524516 GYG1P46976 350 aa10.35□□□□□ -0.75
PUM1-213ENST00000524516 ID4P47928 161 aa10.35□□□□□ -0.75
PUM1-213ENST00000524516 HMGCS2P54868 508 aa10.35□□□□□ -0.75
PUM1-213ENST00000524516 MAP2K5Q13163 448 aa10.35□□□□□ -0.75
PUM1-213ENST00000524516 NCBP3Q53F19 620 aaKnown RBP10.35□□□□□ -0.75
PUM1-213ENST00000524516 UBE3BQ7Z3V4 1068 aa10.35□□□□□ -0.75
PUM1-213ENST00000524516 VPS37DQ86XT2 251 aa10.35□□□□□ -0.75
PUM1-213ENST00000524516 FAM178BQ8IXR5 827 aa10.35□□□□□ -0.75
PUM1-213ENST00000524516 TBC1D22AQ8WUA7 517 aa10.35□□□□□ -0.75
PUM1-213ENST00000524516 EDC3Q96F86 508 aaKnown RBP10.35□□□□□ -0.75
PUM1-213ENST00000524516 PHAXQ9H814 394 aaKnown RBP10.35□□□□□ -0.75
PUM1-213ENST00000524516 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.35□□□□□ -0.753e-6■■□□□ 13.5
PUM1-213ENST00000524516 FAM86C1Q9NVL1 165 aa10.35□□□□□ -0.75
PUM1-213ENST00000524516 FLRT1Q9NZU1 646 aa10.35□□□□□ -0.75
PUM1-213ENST00000524516 LAS1LQ9Y4W2 734 aaKnown RBP10.35□□□□□ -0.75
PUM1-213ENST00000524516 ZNF521Q96K83 1311 aa10.34□□□□□ -0.75
PUM1-213ENST00000524516 DCDC2CA8MYV0 355 aa10.34□□□□□ -0.75
PUM1-213ENST00000524516 RFXAPO00287 272 aa10.34□□□□□ -0.75
PUM1-213ENST00000524516 CTNND1O60716 968 aaKnown RBP10.34□□□□□ -0.75
PUM1-213ENST00000524516 DDX58O95786 925 aaKnown RBP10.34□□□□□ -0.75
PUM1-213ENST00000524516 TIMP1P01033 207 aa10.34□□□□□ -0.75
PUM1-213ENST00000524516 HOXB7P09629 217 aa10.34□□□□□ -0.75
PUM1-213ENST00000524516 ACRP10323 421 aa10.34□□□□□ -0.75
PUM1-213ENST00000524516 CYP2C19P33261 490 aa10.34□□□□□ -0.75
PUM1-213ENST00000524516 RASIP1Q5U651 963 aa10.34□□□□□ -0.75
PUM1-213ENST00000524516 WDR78Q5VTH9 848 aa10.34□□□□□ -0.75
PUM1-213ENST00000524516 KRT40Q6A162 431 aa10.34□□□□□ -0.75
PUM1-213ENST00000524516 ZNF365Q70YC5 407 aa10.34□□□□□ -0.75
PUM1-213ENST00000524516 ZSCAN29Q8IWY8 852 aaPredicted RBP10.34□□□□□ -0.75
PUM1-213ENST00000524516 PRRX2Q99811 253 aa10.34□□□□□ -0.75
PUM1-213ENST00000524516 PAGR1Q9BTK6 254 aa10.34□□□□□ -0.75
PUM1-213ENST00000524516 PORCNQ9H237 461 aa10.34□□□□□ -0.75
PUM1-213ENST00000524516 IQSEC3Q9UPP2 1182 aaPredicted RBP10.34□□□□□ -0.75
PUM1-213ENST00000524516 CHD7Q9P2D1 2997 aa10.33□□□□□ -0.76
PUM1-213ENST00000524516 GLRX3O76003 335 aaKnown RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms