RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 TDRD3Q9H7E2 651 aaKnown RBP8.45□□□□□ -1.06
VPS11-201ENST00000524454 HELLSQ9NRZ9 838 aa8.45□□□□□ -1.06
VPS11-201ENST00000524454 CCDC171Q6TFL3 1326 aa8.45□□□□□ -1.06
VPS11-201ENST00000524454 PITPNM2Q9BZ72 1349 aa8.45□□□□□ -1.06
VPS11-201ENST00000524454 SSC5DA1L4H1 1573 aa8.44□□□□□ -1.06
VPS11-201ENST00000524454 ZKSCAN1P17029 563 aaPredicted RBP8.44□□□□□ -1.06
VPS11-201ENST00000524454 PRDX5P30044 214 aa8.44□□□□□ -1.06
VPS11-201ENST00000524454 TTLL12Q14166 644 aaPredicted RBP8.44□□□□□ -1.06
VPS11-201ENST00000524454 KRT32Q14532 448 aa8.44□□□□□ -1.06
VPS11-201ENST00000524454 DIXDC1Q155Q3 683 aa8.44□□□□□ -1.06
VPS11-201ENST00000524454 CCDC102BQ68D86 513 aa8.44□□□□□ -1.06
VPS11-201ENST00000524454 PI16Q6UXB8 463 aa8.44□□□□□ -1.06
VPS11-201ENST00000524454 CLEC17AQ6ZS10 378 aa8.44□□□□□ -1.06
VPS11-201ENST00000524454 CDAN1Q8IWY9 1227 aa8.44□□□□□ -1.06
VPS11-201ENST00000524454 C2orf69Q8N8R5 385 aa8.44□□□□□ -1.06
VPS11-201ENST00000524454 FSD1Q9BTV5 496 aa8.44□□□□□ -1.06
VPS11-201ENST00000524454 ALDH8A1Q9H2A2 487 aaPredicted RBP8.44□□□□□ -1.06
VPS11-201ENST00000524454 TLR7Q9NYK1 1049 aaKnown RBP8.44□□□□□ -1.06
VPS11-201ENST00000524454 AKAP11Q9UKA4 1901 aa8.43□□□□□ -1.06
VPS11-201ENST00000524454 POTEB3A0JP26 581 aa8.43□□□□□ -1.06
VPS11-201ENST00000524454 TCP10L2B9ZVM9 353 aa8.43□□□□□ -1.06
VPS11-201ENST00000524454 UBE2Q2LH0YL09 131 aa8.43□□□□□ -1.06
VPS11-201ENST00000524454 FOXN1O15353 648 aa8.43□□□□□ -1.06
VPS11-201ENST00000524454 UQCRFS1P1P0C7P4 283 aa8.43□□□□□ -1.06
VPS11-201ENST00000524454 PSMA5P28066 241 aa8.43□□□□□ -1.06
VPS11-201ENST00000524454 ARID4AP29374 1257 aaPredicted RBP8.43□□□□□ -1.06
VPS11-201ENST00000524454 CUL4AQ13619 759 aa8.43□□□□□ -1.06
VPS11-201ENST00000524454 RASGRF1Q13972 1273 aa8.43□□□□□ -1.06
VPS11-201ENST00000524454 NECTIN1Q15223 517 aa8.43□□□□□ -1.06
VPS11-201ENST00000524454 TTF1Q15361 905 aaPredicted RBP8.43□□□□□ -1.06
VPS11-201ENST00000524454 GORABQ5T7V8 394 aa8.43□□□□□ -1.06
VPS11-201ENST00000524454 ZSCAN25Q6NSZ9 544 aa8.43□□□□□ -1.06
VPS11-201ENST00000524454 POTEBQ6S5H4 581 aa8.43□□□□□ -1.06
VPS11-201ENST00000524454 APOBEC3FQ8IUX4 373 aaKnown RBP8.43□□□□□ -1.06
VPS11-201ENST00000524454 MTMR14Q8NCE2 650 aa8.43□□□□□ -1.06
VPS11-201ENST00000524454 DBNDD2Q9BQY9 259 aa8.43□□□□□ -1.06
VPS11-201ENST00000524454 PAG1Q9NWQ8 432 aa8.43□□□□□ -1.06
VPS11-201ENST00000524454 ZNF70Q9UC06 446 aaPredicted RBP8.43□□□□□ -1.06
VPS11-201ENST00000524454 TSKSQ9UJT2 592 aa8.43□□□□□ -1.06
VPS11-201ENST00000524454 RPAP1Q9BWH6 1393 aaPredicted RBP8.43□□□□□ -1.06
VPS11-201ENST00000524454 FAM155AB1AL88 458 aaPredicted RBP8.42□□□□□ -1.06
VPS11-201ENST00000524454 MYO1BO43795 1136 aa8.42□□□□□ -1.06
VPS11-201ENST00000524454 EVI5O60447 810 aa8.42□□□□□ -1.06
VPS11-201ENST00000524454 HSP90AA1P07900 732 aaKnown RBP8.42□□□□□ -1.06
VPS11-201ENST00000524454 ZNF157P51786 506 aaPredicted RBP8.42□□□□□ -1.06
VPS11-201ENST00000524454 EMP3P54852 163 aa8.42□□□□□ -1.06
VPS11-201ENST00000524454 NUCB2P80303 420 aa8.42□□□□□ -1.06
VPS11-201ENST00000524454 MCMDC2Q4G0Z9 681 aa8.42□□□□□ -1.06
VPS11-201ENST00000524454 NBPF12Q5TAG4 269 aaPredicted RBP8.42□□□□□ -1.06
VPS11-201ENST00000524454 VPS53Q5VIR6 699 aa8.42□□□□□ -1.06
VPS11-201ENST00000524454 CWC27Q6UX04 472 aaKnown RBP8.42□□□□□ -1.06
VPS11-201ENST00000524454 TBC1D22AQ8WUA7 517 aa8.42□□□□□ -1.06
VPS11-201ENST00000524454 TEKT1Q969V4 418 aa8.42□□□□□ -1.06
VPS11-201ENST00000524454 DSCC1Q9BVC3 393 aa8.42□□□□□ -1.06
VPS11-201ENST00000524454 DEFB129Q9H1M3 183 aa8.42□□□□□ -1.06
VPS11-201ENST00000524454 BOLA2Q9H3K6 86 aa8.42□□□□□ -1.06
VPS11-201ENST00000524454 GNL3LQ9NVN8 582 aaKnown RBP8.42□□□□□ -1.06
VPS11-201ENST00000524454 ABCF2Q9UG63 623 aa8.42□□□□□ -1.06
VPS11-201ENST00000524454 SERPINA10Q9UK55 444 aa8.42□□□□□ -1.06
VPS11-201ENST00000524454 PDS5AQ29RF7 1337 aaKnown RBP8.42□□□□□ -1.06
VPS11-201ENST00000524454 MAST2Q6P0Q8 1798 aa8.42□□□□□ -1.06
VPS11-201ENST00000524454 ZMYM6O95789 1325 aa8.41□□□□□ -1.06
VPS11-201ENST00000524454 TBC1D12O60347 775 aa8.41□□□□□ -1.06
VPS11-201ENST00000524454 HMGB1P09429 215 aaKnown RBP8.41□□□□□ -1.06
VPS11-201ENST00000524454 ECE1P42892 770 aa8.41□□□□□ -1.06
VPS11-201ENST00000524454 SLC4A3P48751 1232 aa8.41□□□□□ -1.06
VPS11-201ENST00000524454 MAP3K9P80192 1104 aa8.41□□□□□ -1.06
VPS11-201ENST00000524454 NMIQ13287 307 aaPredicted RBP8.41□□□□□ -1.06
VPS11-201ENST00000524454 RASA3Q14644 834 aa8.41□□□□□ -1.06
VPS11-201ENST00000524454 RAB3GAP1Q15042 981 aa8.41□□□□□ -1.06
VPS11-201ENST00000524454 ANKRD1Q15327 319 aa8.41□□□□□ -1.06
VPS11-201ENST00000524454 NFKBIBQ15653 356 aa8.41□□□□□ -1.06
VPS11-201ENST00000524454 ZMYM1Q5SVZ6 1142 aa8.41□□□□□ -1.06
VPS11-201ENST00000524454 COL13A1Q5TAT6 717 aaPredicted RBP8.41□□□□□ -1.06
VPS11-201ENST00000524454 RGMBQ6NW40 437 aa8.41□□□□□ -1.06
VPS11-201ENST00000524454 RASAL3Q86YV0 1011 aa8.41□□□□□ -1.06
VPS11-201ENST00000524454 WDR66Q8TBY9 1149 aa8.41□□□□□ -1.06
VPS11-201ENST00000524454 CHMP4CQ96CF2 233 aa8.41□□□□□ -1.06
VPS11-201ENST00000524454 TTC14Q96N46 770 aa8.41□□□□□ -1.06
VPS11-201ENST00000524454 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.41□□□□□ -1.06
VPS11-201ENST00000524454 TMEM39BQ9GZU3 492 aa8.41□□□□□ -1.06
VPS11-201ENST00000524454 SH2B1Q9NRF2 756 aaPredicted RBP8.41□□□□□ -1.06
VPS11-201ENST00000524454 DENND2AQ9ULE3 1009 aa8.41□□□□□ -1.06
VPS11-201ENST00000524454 ANGEL1Q9UNK9 670 aaKnown RBP8.41□□□□□ -1.06
VPS11-201ENST00000524454 DAGLAQ9Y4D2 1042 aa8.41□□□□□ -1.06
VPS11-201ENST00000524454 SNX14Q9Y5W7 946 aa8.41□□□□□ -1.06
VPS11-201ENST00000524454 NDUFB9Q9Y6M9 179 aa8.41□□□□□ -1.06
VPS11-201ENST00000524454 PCNTO95613 3336 aa8.41□□□□□ -1.06
VPS11-201ENST00000524454 DOCK2Q92608 1830 aa8.4□□□□□ -1.06
VPS11-201ENST00000524454 A0A0D9SFI3 127 aa8.4□□□□□ -1.06
VPS11-201ENST00000524454 DDX11L8A8MPP1 907 aa8.4□□□□□ -1.06
VPS11-201ENST00000524454 SEMA3EO15041 775 aa8.4□□□□□ -1.06
VPS11-201ENST00000524454 RNF113AO15541 343 aaKnown RBP8.4□□□□□ -1.06
VPS11-201ENST00000524454 CD2BP2O95400 341 aaKnown RBP8.4□□□□□ -1.06
VPS11-201ENST00000524454 LDHBP07195 334 aaKnown RBP8.4□□□□□ -1.06
VPS11-201ENST00000524454 NF2P35240 595 aa8.4□□□□□ -1.06
VPS11-201ENST00000524454 MCAMP43121 646 aa8.4□□□□□ -1.06
VPS11-201ENST00000524454 MMP14P50281 582 aa8.4□□□□□ -1.06
VPS11-201ENST00000524454 NEK4P51957 841 aa8.4□□□□□ -1.06
VPS11-201ENST00000524454 TTC39AQ5SRH9 613 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms