RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-223	ENST00000524033	EVI5L	Q96CN4	794 aa		9.21	□□□□□ -0.94
SPIDR-223	ENST00000524033	JAKMIP1	Q96N16	626 aa	Known RBP	9.21	□□□□□ -0.94
SPIDR-223	ENST00000524033	MYD88	Q99836	296 aa		9.21	□□□□□ -0.94
SPIDR-223	ENST00000524033	ADARB2	Q9NS39	739 aa	Known RBP	9.21	□□□□□ -0.94
SPIDR-223	ENST00000524033	DIAPH3	Q9NSV4	1193 aa		9.21	□□□□□ -0.94
SPIDR-223	ENST00000524033	PYCARD	Q9ULZ3	195 aa		9.21	□□□□□ -0.94
SPIDR-223	ENST00000524033	RBM8A	Q9Y5S9	174 aa	Known RBP	9.21	□□□□□ -0.94
SPIDR-223	ENST00000524033	CNTNAP1	P78357	1384 aa		9.21	□□□□□ -0.94
SPIDR-223	ENST00000524033	FER1L6	Q2WGJ9	1857 aa		9.21	□□□□□ -0.94
SPIDR-223	ENST00000524033	SPEF2	Q9C093	1822 aa		9.2	□□□□□ -0.94
SPIDR-223	ENST00000524033	POTEB3	A0JP26	581 aa		9.2	□□□□□ -0.94
SPIDR-223	ENST00000524033	PI4KAP2	A4QPH2	592 aa		9.2	□□□□□ -0.94
SPIDR-223	ENST00000524033	TK2	O00142	265 aa		9.2	□□□□□ -0.94
SPIDR-223	ENST00000524033	HIP1	O00291	1037 aa		9.2	□□□□□ -0.94
SPIDR-223	ENST00000524033	SLC27A2	O14975	620 aa		9.2	□□□□□ -0.94
SPIDR-223	ENST00000524033	CTIF	O43310	598 aa	Known RBP	9.2	□□□□□ -0.94
SPIDR-223	ENST00000524033	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	9.2	□□□□□ -0.94
SPIDR-223	ENST00000524033	UTP14C	Q5TAP6	766 aa	Known RBP	9.2	□□□□□ -0.94
SPIDR-223	ENST00000524033	CREB3L3	Q68CJ9	461 aa		9.2	□□□□□ -0.94
SPIDR-223	ENST00000524033	GIMAP6	Q6P9H5	292 aa		9.2	□□□□□ -0.94
SPIDR-223	ENST00000524033	ADGRD1	Q6QNK2	874 aa		9.2	□□□□□ -0.94
SPIDR-223	ENST00000524033	POTEB	Q6S5H4	581 aa		9.2	□□□□□ -0.94
SPIDR-223	ENST00000524033	CWC27	Q6UX04	472 aa	Known RBP	9.2	□□□□□ -0.94
SPIDR-223	ENST00000524033	FOXD4L3	Q6VB84	417 aa	Predicted RBP	9.2	□□□□□ -0.94
SPIDR-223	ENST00000524033	LAPTM4B	Q86VI4	370 aa		9.2	□□□□□ -0.94
SPIDR-223	ENST00000524033	SLF2	Q8IX21	1173 aa		9.2	□□□□□ -0.94
SPIDR-223	ENST00000524033	TNS4	Q8IZW8	715 aa		9.2	□□□□□ -0.94
SPIDR-223	ENST00000524033	PI4KAP1	Q8N8J0	262 aa		9.2	□□□□□ -0.94
SPIDR-223	ENST00000524033	TDRD7	Q8NHU6	1098 aa	Known RBP	9.2	□□□□□ -0.94
SPIDR-223	ENST00000524033	FAM200A	Q8TCP9	573 aa		9.2	□□□□□ -0.94
SPIDR-223	ENST00000524033	ZNF830	Q96NB3	372 aa	Predicted RBP	9.2	□□□□□ -0.94
SPIDR-223	ENST00000524033	CWC25	Q9NXE8	425 aa	Predicted RBP	9.2	□□□□□ -0.94
SPIDR-223	ENST00000524033	ABT1	Q9ULW3	272 aa	Known RBP	9.2	□□□□□ -0.94
SPIDR-223	ENST00000524033	CYP46A1	Q9Y6A2	500 aa		9.2	□□□□□ -0.94
SPIDR-223	ENST00000524033	MRVI1	Q9Y6F6	885 aa		9.2	□□□□□ -0.94
SPIDR-223	ENST00000524033	TIAM2	Q8IVF5	1701 aa		9.19	□□□□□ -0.94
SPIDR-223	ENST00000524033		H7C1D1	291 aa		9.19	□□□□□ -0.94
SPIDR-223	ENST00000524033	CCDC192	P0DO97	292 aa		9.19	□□□□□ -0.94
SPIDR-223	ENST00000524033	CD46	P15529	392 aa		9.19	□□□□□ -0.94
SPIDR-223	ENST00000524033	GPSM2	P81274	684 aa		9.19	□□□□□ -0.94
SPIDR-223	ENST00000524033	CCDC152	Q4G0S7	254 aa		9.19	□□□□□ -0.94
SPIDR-223	ENST00000524033	CST9	Q5W186	159 aa		9.19	□□□□□ -0.94
SPIDR-223	ENST00000524033	CDC37L1	Q7L3B6	337 aa		9.19	□□□□□ -0.94
SPIDR-223	ENST00000524033	SAMD7	Q7Z3H4	446 aa		9.19	□□□□□ -0.94
SPIDR-223	ENST00000524033	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	9.19	□□□□□ -0.94
SPIDR-223	ENST00000524033	CLASRP	Q8N2M8	674 aa	Known RBP	9.19	□□□□□ -0.94
SPIDR-223	ENST00000524033	C17orf53	Q8N3J3	647 aa	Predicted RBP	9.19	□□□□□ -0.94
SPIDR-223	ENST00000524033	JARID2	Q92833	1246 aa	Predicted RBP	9.19	□□□□□ -0.94
SPIDR-223	ENST00000524033	GPATCH3	Q96I76	525 aa		9.19	□□□□□ -0.94
SPIDR-223	ENST00000524033	KAZALD1	Q96I82	304 aa		9.19	□□□□□ -0.94
SPIDR-223	ENST00000524033	EYA3	Q99504	573 aa		9.19	□□□□□ -0.94
SPIDR-223	ENST00000524033	METTL22	Q9BUU2	404 aa	Predicted RBP	9.19	□□□□□ -0.94
SPIDR-223	ENST00000524033	ZC3H12C	Q9C0D7	883 aa	Known RBP	9.19	□□□□□ -0.94
SPIDR-223	ENST00000524033	GOPC	Q9HD26	462 aa		9.19	□□□□□ -0.94
SPIDR-223	ENST00000524033	ANKIB1	Q9P2G1	1089 aa		9.19	□□□□□ -0.94
SPIDR-223	ENST00000524033	POLL	Q9UGP5	575 aa		9.19	□□□□□ -0.94
SPIDR-223	ENST00000524033	CNOT7	Q9UIV1	285 aa	Known RBP	9.19	□□□□□ -0.94
SPIDR-223	ENST00000524033	TPCN1	Q9ULQ1	816 aa		9.19	□□□□□ -0.94
SPIDR-223	ENST00000524033	COL4A5	P29400	1685 aa		9.19	□□□□□ -0.94
SPIDR-223	ENST00000524033	RASSF10	A6NK89	507 aa		9.18	□□□□□ -0.94
SPIDR-223	ENST00000524033	YDJC	A8MPS7	323 aa		9.18	□□□□□ -0.94
SPIDR-223	ENST00000524033	TRAF5	O00463	557 aa		9.18	□□□□□ -0.94
SPIDR-223	ENST00000524033	PDE8A	O60658	829 aa		9.18	□□□□□ -0.94
SPIDR-223	ENST00000524033	SASH1	O94885	1247 aa		9.18	□□□□□ -0.94
SPIDR-223	ENST00000524033	PCCA	P05165	728 aa	Predicted RBP	9.18	□□□□□ -0.94
SPIDR-223	ENST00000524033	LIG1	P18858	919 aa		9.18	□□□□□ -0.94
SPIDR-223	ENST00000524033	CDC25B	P30305	580 aa		9.18	□□□□□ -0.94
SPIDR-223	ENST00000524033	KRT85	P78386	507 aa		9.18	□□□□□ -0.94
SPIDR-223	ENST00000524033	TYRO3	Q06418	890 aa		9.18	□□□□□ -0.94
SPIDR-223	ENST00000524033	FMR1	Q06787	632 aa	Known RBP eCLIP	9.18	□□□□□ -0.94	1e-11	■■■■■ 41.2
SPIDR-223	ENST00000524033	NMI	Q13287	307 aa	Predicted RBP	9.18	□□□□□ -0.94
SPIDR-223	ENST00000524033	COL9A3	Q14050	684 aa	Predicted RBP	9.18	□□□□□ -0.94
SPIDR-223	ENST00000524033	TOB2	Q14106	344 aa	Predicted RBP	9.18	□□□□□ -0.94
SPIDR-223	ENST00000524033	SYCP1	Q15431	976 aa		9.18	□□□□□ -0.94
SPIDR-223	ENST00000524033	SKIV2L	Q15477	1246 aa	Known RBP	9.18	□□□□□ -0.94
SPIDR-223	ENST00000524033	MAP3K11	Q16584	847 aa		9.18	□□□□□ -0.94
SPIDR-223	ENST00000524033	KSR2	Q6VAB6	950 aa		9.18	□□□□□ -0.94
SPIDR-223	ENST00000524033	PLA2G4D	Q86XP0	818 aa		9.18	□□□□□ -0.94
SPIDR-223	ENST00000524033	TBC1D16	Q8TBP0	767 aa		9.18	□□□□□ -0.94
SPIDR-223	ENST00000524033	AIDA	Q96BJ3	306 aa		9.18	□□□□□ -0.94
SPIDR-223	ENST00000524033	SUCLG2	Q96I99	432 aa		9.18	□□□□□ -0.94
SPIDR-223	ENST00000524033	NUP62CL	Q9H1M0	184 aa		9.18	□□□□□ -0.94
SPIDR-223	ENST00000524033	CLSTN2	Q9H4D0	955 aa		9.18	□□□□□ -0.94
SPIDR-223	ENST00000524033	DBNDD1	Q9H9R9	158 aa		9.18	□□□□□ -0.94
SPIDR-223	ENST00000524033	SEC31B	Q9NQW1	1179 aa		9.18	□□□□□ -0.94
SPIDR-223	ENST00000524033	DDX19A	Q9NUU7	478 aa	Known RBP	9.18	□□□□□ -0.94
SPIDR-223	ENST00000524033	PGAP2	Q9UHJ9	254 aa		9.18	□□□□□ -0.94
SPIDR-223	ENST00000524033	MAP3K2	Q9Y2U5	619 aa		9.18	□□□□□ -0.94
SPIDR-223	ENST00000524033	CDHR2	Q9BYE9	1310 aa		9.17	□□□□□ -0.94
SPIDR-223	ENST00000524033		A0A0D9SFI3	127 aa		9.17	□□□□□ -0.94
SPIDR-223	ENST00000524033	PSMD14	O00487	310 aa		9.17	□□□□□ -0.94
SPIDR-223	ENST00000524033	FOXN1	O15353	648 aa		9.17	□□□□□ -0.94
SPIDR-223	ENST00000524033	PDC	P20941	246 aa		9.17	□□□□□ -0.94
SPIDR-223	ENST00000524033	RPS6KB1	P23443	525 aa		9.17	□□□□□ -0.94
SPIDR-223	ENST00000524033	PSMA5	P28066	241 aa		9.17	□□□□□ -0.94
SPIDR-223	ENST00000524033	HIRA	P54198	1017 aa	Predicted RBP	9.17	□□□□□ -0.94
SPIDR-223	ENST00000524033	NEXN	Q0ZGT2	675 aa		9.17	□□□□□ -0.94
SPIDR-223	ENST00000524033	REST	Q13127	1097 aa		9.17	□□□□□ -0.94
SPIDR-223	ENST00000524033	DPF2	Q92785	391 aa		9.17	□□□□□ -0.94
SPIDR-223	ENST00000524033	LRCH3	Q96II8	777 aa		9.17	□□□□□ -0.94

Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms