RNA–Protein interactions for RNA: ENST00000523066.1

DENND3-220, Transcript of DENN domain containing 3, humanhuman

TSL 4

Gene DENND3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-220ENST00000523066 NUCB1Q02818 461 aa12.71□□□□□ -0.37
DENND3-220ENST00000523066 RRP1BQ14684 758 aaKnown RBP12.71□□□□□ -0.37
DENND3-220ENST00000523066 CHD1LQ86WJ1 897 aa12.71□□□□□ -0.37
DENND3-220ENST00000523066 KBTBD3Q8NAB2 608 aa12.71□□□□□ -0.37
DENND3-220ENST00000523066 SDR42E1Q8WUS8 393 aa12.71□□□□□ -0.37
DENND3-220ENST00000523066 OTUD5Q96G74 571 aa12.71□□□□□ -0.37
DENND3-220ENST00000523066 PUS7LQ9H0K6 701 aaKnown RBP12.71□□□□□ -0.37
DENND3-220ENST00000523066 ZNF112Q9UJU3 913 aa12.71□□□□□ -0.37
DENND3-220ENST00000523066 CSADQ9Y600 493 aa12.71□□□□□ -0.37
DENND3-220ENST00000523066 CASP8AP2Q9UKL3 1982 aa12.7□□□□□ -0.38
DENND3-220ENST00000523066 ERC2O15083 957 aa12.7□□□□□ -0.38
DENND3-220ENST00000523066 IGSF3O75054 1194 aa12.7□□□□□ -0.38
DENND3-220ENST00000523066 GLRX3O76003 335 aaKnown RBP12.7□□□□□ -0.38
DENND3-220ENST00000523066 MBD4O95243 580 aa12.7□□□□□ -0.38
DENND3-220ENST00000523066 HSPA8P11142 646 aaKnown RBP12.7□□□□□ -0.38
DENND3-220ENST00000523066 LBX1P52954 281 aa12.7□□□□□ -0.38
DENND3-220ENST00000523066 MAP3K10Q02779 954 aa12.7□□□□□ -0.38
DENND3-220ENST00000523066 CCDC84Q86UT8 332 aaPredicted RBP12.7□□□□□ -0.38
DENND3-220ENST00000523066 AIDAQ96BJ3 306 aa12.7□□□□□ -0.38
DENND3-220ENST00000523066 HOOK2Q96ED9 719 aa12.7□□□□□ -0.38
DENND3-220ENST00000523066 DNAJC18Q9H819 358 aa12.7□□□□□ -0.38
DENND3-220ENST00000523066 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.7□□□□□ -0.38
DENND3-220ENST00000523066 RNF186Q9NXI6 227 aa12.7□□□□□ -0.38
DENND3-220ENST00000523066 STAP2Q9UGK3 403 aa12.7□□□□□ -0.38
DENND3-220ENST00000523066 COL2A1P02458 1487 aaPredicted RBP12.7□□□□□ -0.38
DENND3-220ENST00000523066 UNCXA6NJT0 531 aa12.69□□□□□ -0.38
DENND3-220ENST00000523066 SMIM22K7EJ46 135 aa12.69□□□□□ -0.38
DENND3-220ENST00000523066 TRPA1O75762 1119 aa12.69□□□□□ -0.38
DENND3-220ENST00000523066 PRR29P0C7W0 189 aa12.69□□□□□ -0.38
DENND3-220ENST00000523066 PDE4AP27815 886 aa12.69□□□□□ -0.38
DENND3-220ENST00000523066 UBE3CQ15386 1083 aa12.69□□□□□ -0.38
DENND3-220ENST00000523066 SHROOM1Q2M3G4 852 aaPredicted RBP12.69□□□□□ -0.38
DENND3-220ENST00000523066 PLEKHM2Q8IWE5 1019 aa12.69□□□□□ -0.38
DENND3-220ENST00000523066 OSBP2Q969R2 916 aa12.69□□□□□ -0.38
DENND3-220ENST00000523066 BEGAINQ9BUH8 593 aa12.69□□□□□ -0.38
DENND3-220ENST00000523066 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.69□□□□□ -0.38
DENND3-220ENST00000523066 CIZ1Q9ULV3 898 aaPredicted RBP12.69□□□□□ -0.38
DENND3-220ENST00000523066 PTPRFP10586 1907 aa12.68□□□□□ -0.38
DENND3-220ENST00000523066 SPDYE5A6NIY4 337 aa12.68□□□□□ -0.38
DENND3-220ENST00000523066 M0R2C6 588 aa12.68□□□□□ -0.38
DENND3-220ENST00000523066 IGF2BP3O00425 579 aaKnown RBP eCLIP12.68□□□□□ -0.38
DENND3-220ENST00000523066 IRF6O14896 467 aa12.68□□□□□ -0.38
DENND3-220ENST00000523066 ZBTB48P10074 688 aaPredicted RBP12.68□□□□□ -0.38
DENND3-220ENST00000523066 CYP2D6P10635 497 aa12.68□□□□□ -0.38
DENND3-220ENST00000523066 TM4SF4P48230 202 aa12.68□□□□□ -0.38
DENND3-220ENST00000523066 CTCFP49711 727 aaPredicted RBP12.68□□□□□ -0.38
DENND3-220ENST00000523066 JAG1P78504 1218 aa12.68□□□□□ -0.38
DENND3-220ENST00000523066 COL13A1Q5TAT6 717 aaPredicted RBP12.68□□□□□ -0.38
DENND3-220ENST00000523066 MS4A4AQ96JQ5 239 aa12.68□□□□□ -0.38
DENND3-220ENST00000523066 SEC62Q99442 399 aaKnown RBP12.68□□□□□ -0.38
DENND3-220ENST00000523066 PTPN18Q99952 460 aa12.68□□□□□ -0.38
DENND3-220ENST00000523066 FSD1Q9BTV5 496 aa12.68□□□□□ -0.38
DENND3-220ENST00000523066 MYH8P13535 1937 aa12.67□□□□□ -0.38
DENND3-220ENST00000523066 MANSC4A6NHS7 340 aaPredicted RBP12.67□□□□□ -0.38
DENND3-220ENST00000523066 RNF113AO15541 343 aaKnown RBP12.67□□□□□ -0.38
DENND3-220ENST00000523066 TBC1D12O60347 775 aa12.67□□□□□ -0.38
DENND3-220ENST00000523066 TBC1D8O95759 1140 aa12.67□□□□□ -0.38
DENND3-220ENST00000523066 PLCD1P51178 756 aa12.67□□□□□ -0.38
DENND3-220ENST00000523066 NOL9Q5SY16 702 aaKnown RBP12.67□□□□□ -0.38
DENND3-220ENST00000523066 ZSCAN25Q6NSZ9 544 aa12.67□□□□□ -0.38
DENND3-220ENST00000523066 ERO1BQ86YB8 467 aa12.67□□□□□ -0.38
DENND3-220ENST00000523066 SCYL3Q8IZE3 742 aa12.67□□□□□ -0.38
DENND3-220ENST00000523066 CRNKL1Q9BZJ0 848 aaKnown RBP12.67□□□□□ -0.38
DENND3-220ENST00000523066 DHX36Q9H2U1 1008 aaKnown RBP12.67□□□□□ -0.38
DENND3-220ENST00000523066 R3HDMLQ9H3Y0 253 aa12.67□□□□□ -0.38
DENND3-220ENST00000523066 DCP1AQ9NPI6 582 aaPredicted RBP12.67□□□□□ -0.38
DENND3-220ENST00000523066 PI4KBQ9UBF8 816 aa12.67□□□□□ -0.38
DENND3-220ENST00000523066 CYP2D7A0A087X1C5 515 aa12.66□□□□□ -0.38
DENND3-220ENST00000523066 GDF11O95390 407 aa12.66□□□□□ -0.38
DENND3-220ENST00000523066 PTPRAP18433 802 aa12.66□□□□□ -0.38
DENND3-220ENST00000523066 TMED8Q6PL24 325 aaPredicted RBP12.66□□□□□ -0.38
DENND3-220ENST00000523066 IFNL1Q8IU54 200 aa12.66□□□□□ -0.38
DENND3-220ENST00000523066 BRI3BPQ8WY22 251 aa12.66□□□□□ -0.38
DENND3-220ENST00000523066 APPBP2Q92624 585 aa12.66□□□□□ -0.38
DENND3-220ENST00000523066 MCM9Q9NXL9 1143 aa12.66□□□□□ -0.38
DENND3-220ENST00000523066 SLC4A4Q9Y6R1 1079 aa12.66□□□□□ -0.38
DENND3-220ENST00000523066 CCL15-CCL14A0A0B4J2E2 113 aa12.65□□□□□ -0.38
DENND3-220ENST00000523066 CTNND1O60716 968 aaKnown RBP12.65□□□□□ -0.38
DENND3-220ENST00000523066 POLR3DP05423 398 aaPredicted RBP12.65□□□□□ -0.38
DENND3-220ENST00000523066 SREBF2Q12772 1141 aa12.65□□□□□ -0.38
DENND3-220ENST00000523066 PPIL2Q13356 520 aa12.65□□□□□ -0.38
DENND3-220ENST00000523066 CCL15Q16663 113 aa12.65□□□□□ -0.38
DENND3-220ENST00000523066 CCDC129Q6ZRS4 1044 aa12.65□□□□□ -0.38
DENND3-220ENST00000523066 METTL16Q86W50 562 aaKnown RBP12.65□□□□□ -0.38
DENND3-220ENST00000523066 SKAP1Q86WV1 359 aa12.65□□□□□ -0.38
DENND3-220ENST00000523066 CERS3Q8IU89 383 aa12.65□□□□□ -0.38
DENND3-220ENST00000523066 CRACR2BQ8N4Y2 399 aaPredicted RBP12.65□□□□□ -0.38
DENND3-220ENST00000523066 STRBPQ96SI9 672 aaKnown RBP12.65□□□□□ -0.38
DENND3-220ENST00000523066 TESPA1A2RU30 521 aaPredicted RBP12.64□□□□□ -0.39
DENND3-220ENST00000523066 TRIM6-TRIM34B2RNG4 842 aa12.64□□□□□ -0.39
DENND3-220ENST00000523066 GPAA1O43292 621 aa12.64□□□□□ -0.39
DENND3-220ENST00000523066 HLA-DOAP06340 250 aa12.64□□□□□ -0.39
DENND3-220ENST00000523066 ZFYP08048 801 aaPredicted RBP12.64□□□□□ -0.39
DENND3-220ENST00000523066 CAP2P40123 477 aa12.64□□□□□ -0.39
DENND3-220ENST00000523066 PPATQ06203 517 aa12.64□□□□□ -0.39
DENND3-220ENST00000523066 ZMYM1Q5SVZ6 1142 aa12.64□□□□□ -0.39
DENND3-220ENST00000523066 FOXP4Q8IVH2 680 aaPredicted RBP12.64□□□□□ -0.39
DENND3-220ENST00000523066 FAM43AQ8N2R8 423 aa12.64□□□□□ -0.39
DENND3-220ENST00000523066 SLC44A5Q8NCS7 719 aa12.64□□□□□ -0.39
DENND3-220ENST00000523066 RILPL2Q969X0 211 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms