RNA–Protein interactions for RNA: ENST00000522328.1

SH2D4A-205, Transcript of SH2 domain containing 4A, humanhuman

TSL 2

Gene SH2D4A, Length 562 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-205ENST00000522328 GRIK5Q16478 980 aa8.53□□□□□ -1.04
SH2D4A-205ENST00000522328 APOBEC3HQ6NTF7 200 aaKnown RBP8.53□□□□□ -1.04
SH2D4A-205ENST00000522328 CDAN1Q8IWY9 1227 aa8.53□□□□□ -1.04
SH2D4A-205ENST00000522328 WRNIP1Q96S55 665 aa8.53□□□□□ -1.04
SH2D4A-205ENST00000522328 ZNF341Q9BYN7 854 aa8.53□□□□□ -1.04
SH2D4A-205ENST00000522328 GNL3LQ9NVN8 582 aaKnown RBP8.53□□□□□ -1.04
SH2D4A-205ENST00000522328 FAM198AQ9UFP1 575 aa8.53□□□□□ -1.04
SH2D4A-205ENST00000522328 LHX6Q9UPM6 363 aa8.53□□□□□ -1.04
SH2D4A-205ENST00000522328 IQSEC3Q9UPP2 1182 aaPredicted RBP8.53□□□□□ -1.04
SH2D4A-205ENST00000522328 SNCAIPQ9Y6H5 919 aa8.53□□□□□ -1.04
SH2D4A-205ENST00000522328 CT47B1P0C2W7 299 aaPredicted RBP8.52□□□□□ -1.05
SH2D4A-205ENST00000522328 CACNB3P54284 484 aa8.52□□□□□ -1.05
SH2D4A-205ENST00000522328 PPATQ06203 517 aa8.52□□□□□ -1.05
SH2D4A-205ENST00000522328 SLC9C1Q4G0N8 1177 aa8.52□□□□□ -1.05
SH2D4A-205ENST00000522328 FAM43AQ8N2R8 423 aa8.52□□□□□ -1.05
SH2D4A-205ENST00000522328 FAM151AQ8WW52 585 aa8.52□□□□□ -1.05
SH2D4A-205ENST00000522328 SSH1Q8WYL5 1049 aa8.52□□□□□ -1.05
SH2D4A-205ENST00000522328 ZNF333Q96JL9 665 aa8.52□□□□□ -1.05
SH2D4A-205ENST00000522328 BTBD19C9JJ37 291 aa8.51□□□□□ -1.05
SH2D4A-205ENST00000522328 CIAO1O76071 339 aa8.51□□□□□ -1.05
SH2D4A-205ENST00000522328 COL9A1P20849 921 aa8.51□□□□□ -1.05
SH2D4A-205ENST00000522328 RFX5P48382 616 aaPredicted RBP8.51□□□□□ -1.05
SH2D4A-205ENST00000522328 LACTBP83111 547 aaPredicted RBP8.51□□□□□ -1.05
SH2D4A-205ENST00000522328 SLFN5Q08AF3 891 aa8.51□□□□□ -1.05
SH2D4A-205ENST00000522328 ZNF710Q8N1W2 664 aa8.51□□□□□ -1.05
SH2D4A-205ENST00000522328 ZGPATQ8N5A5 531 aaKnown RBP8.51□□□□□ -1.05
SH2D4A-205ENST00000522328 KLHDC4Q8TBB5 520 aa8.51□□□□□ -1.05
SH2D4A-205ENST00000522328 ZKSCAN4Q969J2 545 aaPredicted RBP8.51□□□□□ -1.05
SH2D4A-205ENST00000522328 SCUBE2Q9NQ36 999 aa8.51□□□□□ -1.05
SH2D4A-205ENST00000522328 DAGLAQ9Y4D2 1042 aa8.51□□□□□ -1.05
SH2D4A-205ENST00000522328 PTCH2Q9Y6C5 1203 aa8.51□□□□□ -1.05
SH2D4A-205ENST00000522328 KIAA0100Q14667 2235 aaKnown RBP8.51□□□□□ -1.05
SH2D4A-205ENST00000522328 SALL1Q9NSC2 1324 aa8.51□□□□□ -1.05
SH2D4A-205ENST00000522328 LDHBP07195 334 aaKnown RBP8.5□□□□□ -1.05
SH2D4A-205ENST00000522328 UBTFL1P0CB47 393 aaPredicted RBP8.5□□□□□ -1.05
SH2D4A-205ENST00000522328 IL15P40933 162 aaPredicted RBP8.5□□□□□ -1.05
SH2D4A-205ENST00000522328 ATP2B3Q16720 1220 aa8.5□□□□□ -1.05
SH2D4A-205ENST00000522328 SLC4A8Q2Y0W8 1093 aa8.5□□□□□ -1.05
SH2D4A-205ENST00000522328 PPP4R3BQ5MIZ7 849 aa8.5□□□□□ -1.05
SH2D4A-205ENST00000522328 NOL9Q5SY16 702 aaKnown RBP8.5□□□□□ -1.05
SH2D4A-205ENST00000522328 MYSM1Q5VVJ2 828 aa8.5□□□□□ -1.05
SH2D4A-205ENST00000522328 ATG9AQ7Z3C6 839 aa8.5□□□□□ -1.05
SH2D4A-205ENST00000522328 ANKRD23Q86SG2 305 aa8.5□□□□□ -1.05
SH2D4A-205ENST00000522328 PROCA1Q8NCQ7 364 aaPredicted RBP8.5□□□□□ -1.05
SH2D4A-205ENST00000522328 SMC4Q9NTJ3 1288 aa8.5□□□□□ -1.05
SH2D4A-205ENST00000522328 CEP126Q9P2H0 1117 aa8.5□□□□□ -1.05
SH2D4A-205ENST00000522328 ZNF112Q9UJU3 913 aa8.5□□□□□ -1.05
SH2D4A-205ENST00000522328 DENND2AQ9ULE3 1009 aa8.5□□□□□ -1.05
SH2D4A-205ENST00000522328 KCNH4Q9UQ05 1017 aa8.5□□□□□ -1.05
SH2D4A-205ENST00000522328 EN2P19622 333 aaPredicted RBP8.49□□□□□ -1.05
SH2D4A-205ENST00000522328 HOXD10P28358 340 aa8.49□□□□□ -1.05
SH2D4A-205ENST00000522328 INPP5BP32019 993 aa8.49□□□□□ -1.05
SH2D4A-205ENST00000522328 CAP1Q01518 475 aa8.49□□□□□ -1.05
SH2D4A-205ENST00000522328 HABP4Q5JVS0 413 aaKnown RBP8.49□□□□□ -1.05
SH2D4A-205ENST00000522328 CDC42EP5Q6NZY7 148 aa8.49□□□□□ -1.05
SH2D4A-205ENST00000522328 C17orf99Q6UX52 265 aa8.49□□□□□ -1.05
SH2D4A-205ENST00000522328 MAMSTRQ6ZN01 415 aa8.49□□□□□ -1.05
SH2D4A-205ENST00000522328 SLF2Q8IX21 1173 aa8.49□□□□□ -1.05
SH2D4A-205ENST00000522328 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.49□□□□□ -1.05
SH2D4A-205ENST00000522328 API5Q9BZZ5 524 aaKnown RBP8.49□□□□□ -1.05
SH2D4A-205ENST00000522328 PDS5AQ29RF7 1337 aaKnown RBP8.49□□□□□ -1.05
SH2D4A-205ENST00000522328 MYH13Q9UKX3 1938 aa8.48□□□□□ -1.05
SH2D4A-205ENST00000522328 PPP1R3GB7ZBB8 358 aa8.48□□□□□ -1.05
SH2D4A-205ENST00000522328 PDHXO00330 501 aa8.48□□□□□ -1.05
SH2D4A-205ENST00000522328 CXCL11O14625 94 aa8.48□□□□□ -1.05
SH2D4A-205ENST00000522328 ENTPD3O75355 529 aa8.48□□□□□ -1.05
SH2D4A-205ENST00000522328 PRDX5P30044 214 aa8.48□□□□□ -1.05
SH2D4A-205ENST00000522328 MCM6Q14566 821 aa8.48□□□□□ -1.05
SH2D4A-205ENST00000522328 DIXDC1Q155Q3 683 aa8.48□□□□□ -1.05
SH2D4A-205ENST00000522328 MIGA2Q7L4E1 593 aa8.48□□□□□ -1.05
SH2D4A-205ENST00000522328 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.48□□□□□ -1.05
SH2D4A-205ENST00000522328 PARK7Q99497 189 aaKnown RBP8.48□□□□□ -1.05
SH2D4A-205ENST00000522328 IDI2Q9BXS1 227 aa8.48□□□□□ -1.05
SH2D4A-205ENST00000522328 C1orf115Q9H7X2 142 aa8.48□□□□□ -1.05
SH2D4A-205ENST00000522328 USP40Q9NVE5 1235 aa8.48□□□□□ -1.05
SH2D4A-205ENST00000522328 POLR3EQ9NVU0 708 aa8.48□□□□□ -1.05
SH2D4A-205ENST00000522328 GAKO14976 1311 aa8.48□□□□□ -1.05
SH2D4A-205ENST00000522328 RCCD1A6NED2 376 aa8.47□□□□□ -1.05
SH2D4A-205ENST00000522328 CAPN2P17655 700 aa8.47□□□□□ -1.05
SH2D4A-205ENST00000522328 PSMC4P43686 418 aa8.47□□□□□ -1.05
SH2D4A-205ENST00000522328 TCP10Q12799 353 aa8.47□□□□□ -1.05
SH2D4A-205ENST00000522328 NFIAQ12857 509 aa8.47□□□□□ -1.05
SH2D4A-205ENST00000522328 SPTY2D1Q68D10 685 aaPredicted RBP8.47□□□□□ -1.05
SH2D4A-205ENST00000522328 FASTKD5Q7L8L6 764 aaKnown RBP8.47□□□□□ -1.05
SH2D4A-205ENST00000522328 DZIP1Q86YF9 867 aaKnown RBP8.47□□□□□ -1.05
SH2D4A-205ENST00000522328 TRMT2AQ8IZ69 625 aaKnown RBP8.47□□□□□ -1.05
SH2D4A-205ENST00000522328 NKX2-3Q8TAU0 364 aa8.47□□□□□ -1.05
SH2D4A-205ENST00000522328 FAM163AQ96GL9 167 aaPredicted RBP8.47□□□□□ -1.05
SH2D4A-205ENST00000522328 TBC1D2Q9BYX2 928 aa8.47□□□□□ -1.05
SH2D4A-205ENST00000522328 ARHGAP39Q9C0H5 1083 aa8.47□□□□□ -1.05
SH2D4A-205ENST00000522328 SIL1Q9H173 461 aa8.47□□□□□ -1.05
SH2D4A-205ENST00000522328 COPRSQ9NQ92 184 aa8.47□□□□□ -1.05
SH2D4A-205ENST00000522328 SRRDQ9UH36 339 aa8.47□□□□□ -1.05
SH2D4A-205ENST00000522328 AKAP2Q9Y2D5 859 aa8.47□□□□□ -1.05
SH2D4A-205ENST00000522328 ADGRA2Q96PE1 1338 aa8.47□□□□□ -1.05
SH2D4A-205ENST00000522328 A6NJR5 290 aa8.46□□□□□ -1.06
SH2D4A-205ENST00000522328 C3orf80F5H4A9 247 aa8.46□□□□□ -1.06
SH2D4A-205ENST00000522328 FMNL1O95466 1100 aaPredicted RBP8.46□□□□□ -1.06
SH2D4A-205ENST00000522328 MAP4K4O95819 1239 aaPredicted RBP8.46□□□□□ -1.06
SH2D4A-205ENST00000522328 PTPREP23469 700 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms