RNA–Protein interactions for RNA: ENST00000522052.5

CTNNA1-233, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-233ENST00000522052 NLRC3Q7RTR2 1065 aa7.18□□□□□ -1.26
CTNNA1-233ENST00000522052 ZNF417Q8TAU3 575 aa7.18□□□□□ -1.26
CTNNA1-233ENST00000522052 WDR89Q96FK6 387 aaPredicted RBP7.18□□□□□ -1.26
CTNNA1-233ENST00000522052 ZNF587Q96SQ5 575 aaPredicted RBP7.18□□□□□ -1.26
CTNNA1-233ENST00000522052 CNNM2Q9H8M5 875 aa7.18□□□□□ -1.26
CTNNA1-233ENST00000522052 SPC25Q9HBM1 224 aa7.18□□□□□ -1.26
CTNNA1-233ENST00000522052 ADAM30Q9UKF2 790 aa7.18□□□□□ -1.26
CTNNA1-233ENST00000522052 KDM2BQ8NHM5 1336 aa7.18□□□□□ -1.26
CTNNA1-233ENST00000522052 DCDC2CA8MYV0 355 aa7.17□□□□□ -1.26
CTNNA1-233ENST00000522052 H3BM21 787 aa7.17□□□□□ -1.26
CTNNA1-233ENST00000522052 PPP1R12AO14974 1030 aaPredicted RBP7.17□□□□□ -1.26
CTNNA1-233ENST00000522052 DIAPH1O60610 1272 aaKnown RBP7.17□□□□□ -1.26
CTNNA1-233ENST00000522052 DNAJA2O60884 412 aa7.17□□□□□ -1.26
CTNNA1-233ENST00000522052 DNAJC6O75061 913 aa7.17□□□□□ -1.26
CTNNA1-233ENST00000522052 VSIG8P0DPA2 414 aa7.17□□□□□ -1.26
CTNNA1-233ENST00000522052 SRSF11Q05519 484 aaKnown RBP7.17□□□□□ -1.26
CTNNA1-233ENST00000522052 NCAPHQ15003 741 aa7.17□□□□□ -1.26
CTNNA1-233ENST00000522052 ZYXQ15942 572 aaKnown RBP7.17□□□□□ -1.26
CTNNA1-233ENST00000522052 ZC3H12AQ5D1E8 599 aaKnown RBP7.17□□□□□ -1.26
CTNNA1-233ENST00000522052 RNFT1Q5M7Z0 435 aa7.17□□□□□ -1.26
CTNNA1-233ENST00000522052 MRM1Q6IN84 353 aaKnown RBP7.17□□□□□ -1.26
CTNNA1-233ENST00000522052 C8orf86Q6ZUL3 223 aa7.17□□□□□ -1.26
CTNNA1-233ENST00000522052 C16orf86Q6ZW13 317 aa7.17□□□□□ -1.26
CTNNA1-233ENST00000522052 EEPD1Q7L9B9 569 aa7.17□□□□□ -1.26
CTNNA1-233ENST00000522052 MAP4K3Q8IVH8 894 aa7.17□□□□□ -1.26
CTNNA1-233ENST00000522052 COL25A1Q9BXS0 654 aaPredicted RBP7.17□□□□□ -1.26
CTNNA1-233ENST00000522052 USP26Q9BXU7 913 aa7.17□□□□□ -1.26
CTNNA1-233ENST00000522052 PHAXQ9H814 394 aaKnown RBP7.17□□□□□ -1.26
CTNNA1-233ENST00000522052 PRDM6Q9NQX0 595 aa7.17□□□□□ -1.26
CTNNA1-233ENST00000522052 PFDN2Q9UHV9 154 aa7.17□□□□□ -1.26
CTNNA1-233ENST00000522052 ZMYM5Q9UJ78 669 aa7.17□□□□□ -1.26
CTNNA1-233ENST00000522052 LEMD3Q9Y2U8 911 aa7.17□□□□□ -1.26
CTNNA1-233ENST00000522052 NOP58Q9Y2X3 529 aaKnown RBP7.17□□□□□ -1.26
CTNNA1-233ENST00000522052 COL4A3BPQ9Y5P4 624 aa7.17□□□□□ -1.26
CTNNA1-233ENST00000522052 PRAMEF27A3QJZ7 478 aa7.16□□□□□ -1.26
CTNNA1-233ENST00000522052 PGRP06401 933 aa7.16□□□□□ -1.26
CTNNA1-233ENST00000522052 GRK4P32298 578 aa7.16□□□□□ -1.26
CTNNA1-233ENST00000522052 SSRP1Q08945 709 aaKnown RBP7.16□□□□□ -1.26
CTNNA1-233ENST00000522052 SETDB1Q15047 1291 aa7.16□□□□□ -1.26
CTNNA1-233ENST00000522052 VHLLQ6RSH7 139 aa7.16□□□□□ -1.26
CTNNA1-233ENST00000522052 C1orf229Q6ZS94 237 aaPredicted RBP7.16□□□□□ -1.26
CTNNA1-233ENST00000522052 ILDR2Q71H61 639 aa7.16□□□□□ -1.26
CTNNA1-233ENST00000522052 C12orf40Q86WS4 652 aa7.16□□□□□ -1.26
CTNNA1-233ENST00000522052 GALNT11Q8NCW6 608 aa7.16□□□□□ -1.26
CTNNA1-233ENST00000522052 ACDQ96AP0 544 aa7.16□□□□□ -1.26
CTNNA1-233ENST00000522052 SLC9A7Q96T83 725 aa7.16□□□□□ -1.26
CTNNA1-233ENST00000522052 FEZ1Q99689 392 aa7.16□□□□□ -1.26
CTNNA1-233ENST00000522052 PCDHGC5Q9Y5F6 944 aa7.16□□□□□ -1.26
CTNNA1-233ENST00000522052 LTBP3Q9NS15 1303 aa7.16□□□□□ -1.26
CTNNA1-233ENST00000522052 LOC100289279A0A1B0GTE1 492 aa7.15□□□□□ -1.26
CTNNA1-233ENST00000522052 SLFN14P0C7P3 912 aa7.15□□□□□ -1.26
CTNNA1-233ENST00000522052 GYS2P54840 703 aa7.15□□□□□ -1.26
CTNNA1-233ENST00000522052 NLRP12P59046 1061 aa7.15□□□□□ -1.26
CTNNA1-233ENST00000522052 ANAPC15P60006 121 aa7.15□□□□□ -1.26
CTNNA1-233ENST00000522052 RING1Q06587 406 aa7.15□□□□□ -1.26
CTNNA1-233ENST00000522052 TAF7LQ5H9L4 462 aa7.15□□□□□ -1.26
CTNNA1-233ENST00000522052 CHSY3Q70JA7 882 aa7.15□□□□□ -1.26
CTNNA1-233ENST00000522052 EDARADDQ8WWZ3 215 aa7.15□□□□□ -1.26
CTNNA1-233ENST00000522052 WDR18Q9BV38 432 aa7.15□□□□□ -1.26
CTNNA1-233ENST00000522052 WNT10AQ9GZT5 417 aa7.15□□□□□ -1.26
CTNNA1-233ENST00000522052 PCDH12Q9NPG4 1184 aa7.15□□□□□ -1.26
CTNNA1-233ENST00000522052 KLHL3Q9UH77 587 aa7.15□□□□□ -1.26
CTNNA1-233ENST00000522052 PTCH2Q9Y6C5 1203 aa7.15□□□□□ -1.26
CTNNA1-233ENST00000522052 SYNGAP1Q96PV0 1343 aa7.15□□□□□ -1.26
CTNNA1-233ENST00000522052 LCE2BO14633 110 aa7.14□□□□□ -1.27
CTNNA1-233ENST00000522052 ADAM11O75078 769 aa7.14□□□□□ -1.27
CTNNA1-233ENST00000522052 AOC2O75106 756 aa7.14□□□□□ -1.27
CTNNA1-233ENST00000522052 DLGAP3O95886 979 aa7.14□□□□□ -1.27
CTNNA1-233ENST00000522052 ERVK-24P63145 666 aa7.14□□□□□ -1.27
CTNNA1-233ENST00000522052 ACSF2Q96CM8 615 aaPredicted RBP7.14□□□□□ -1.27
CTNNA1-233ENST00000522052 HIF3AQ9Y2N7 669 aa7.14□□□□□ -1.27
CTNNA1-233ENST00000522052 CSADQ9Y600 493 aa7.14□□□□□ -1.27
CTNNA1-233ENST00000522052 CHURC1-FNTBB4DL54 471 aa7.13□□□□□ -1.27
CTNNA1-233ENST00000522052 DDX3YO15523 660 aaKnown RBP7.13□□□□□ -1.27
CTNNA1-233ENST00000522052 CD68P34810 354 aaPredicted RBP7.13□□□□□ -1.27
CTNNA1-233ENST00000522052 ETF1P62495 437 aaKnown RBP7.13□□□□□ -1.27
CTNNA1-233ENST00000522052 TCEA2Q15560 299 aa7.13□□□□□ -1.27
CTNNA1-233ENST00000522052 Q6ZNB5 142 aa7.13□□□□□ -1.27
CTNNA1-233ENST00000522052 DMRTC2Q8IXT2 367 aaPredicted RBP7.13□□□□□ -1.27
CTNNA1-233ENST00000522052 SYNPOQ8N3V7 929 aa7.13□□□□□ -1.27
CTNNA1-233ENST00000522052 GALNT6Q8NCL4 622 aa7.13□□□□□ -1.27
CTNNA1-233ENST00000522052 ZSWIM2Q8NEG5 633 aa7.13□□□□□ -1.27
CTNNA1-233ENST00000522052 BTBD6Q96KE9 485 aa7.13□□□□□ -1.27
CTNNA1-233ENST00000522052 EPN3Q9H201 632 aa7.13□□□□□ -1.27
CTNNA1-233ENST00000522052 ZNF214Q9UL59 606 aaPredicted RBP7.13□□□□□ -1.27
CTNNA1-233ENST00000522052 PCDHB10Q9UN67 800 aa7.13□□□□□ -1.27
CTNNA1-233ENST00000522052 FANCGO15287 622 aa7.12□□□□□ -1.27
CTNNA1-233ENST00000522052 SUSD5O60279 629 aa7.12□□□□□ -1.27
CTNNA1-233ENST00000522052 RAB11FIP3O75154 756 aa7.12□□□□□ -1.27
CTNNA1-233ENST00000522052 ADAMTS2O95450 1211 aa7.12□□□□□ -1.27
CTNNA1-233ENST00000522052 NID1P14543 1247 aa7.12□□□□□ -1.27
CTNNA1-233ENST00000522052 RAG1P15918 1043 aa7.12□□□□□ -1.27
CTNNA1-233ENST00000522052 CCNFP41002 786 aa7.12□□□□□ -1.27
CTNNA1-233ENST00000522052 SLC7A5Q01650 507 aa7.12□□□□□ -1.27
CTNNA1-233ENST00000522052 ID3Q02535 119 aa7.12□□□□□ -1.27
CTNNA1-233ENST00000522052 LONRF2Q1L5Z9 754 aa7.12□□□□□ -1.27
CTNNA1-233ENST00000522052 TKFCQ3LXA3 575 aa7.12□□□□□ -1.27
CTNNA1-233ENST00000522052 PPM1JQ5JR12 505 aa7.12□□□□□ -1.27
CTNNA1-233ENST00000522052 KIAA1211LQ6NV74 962 aa7.12□□□□□ -1.27
CTNNA1-233ENST00000522052 DCAF11Q8TEB1 546 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms