RNA–Protein interactions for RNA: ENST00000521283.1

TRIM35-204, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-204ENST00000521283 LBX1P52954 281 aa12.47□□□□□ -0.41
TRIM35-204ENST00000521283 NOM1Q5C9Z4 860 aaKnown RBP12.47□□□□□ -0.41
TRIM35-204ENST00000521283 COL13A1Q5TAT6 717 aaPredicted RBP12.47□□□□□ -0.41
TRIM35-204ENST00000521283 TNS4Q8IZW8 715 aa12.47□□□□□ -0.41
TRIM35-204ENST00000521283 TEPSINQ96N21 525 aa12.47□□□□□ -0.41
TRIM35-204ENST00000521283 NOL10Q9BSC4 688 aaKnown RBP12.47□□□□□ -0.41
TRIM35-204ENST00000521283 LRP2BPQ9P2M1 347 aa12.47□□□□□ -0.41
TRIM35-204ENST00000521283 CSADQ9Y600 493 aa12.47□□□□□ -0.41
TRIM35-204ENST00000521283 LAMB1P07942 1786 aa12.47□□□□□ -0.41
TRIM35-204ENST00000521283 BAG3O95817 575 aa12.46□□□□□ -0.41
TRIM35-204ENST00000521283 PRKG1Q13976 671 aa12.46□□□□□ -0.41
TRIM35-204ENST00000521283 SPRYD7Q5W111 196 aa12.46□□□□□ -0.41
TRIM35-204ENST00000521283 CDC42EP5Q6NZY7 148 aa12.46□□□□□ -0.41
TRIM35-204ENST00000521283 ZDHHC16Q969W1 377 aa12.46□□□□□ -0.41
TRIM35-204ENST00000521283 CFHR5Q9BXR6 569 aa12.46□□□□□ -0.41
TRIM35-204ENST00000521283 TMEM39BQ9GZU3 492 aa12.46□□□□□ -0.41
TRIM35-204ENST00000521283 USP40Q9NVE5 1235 aa12.46□□□□□ -0.41
TRIM35-204ENST00000521283 VPS9D1Q9Y2B5 631 aa12.46□□□□□ -0.41
TRIM35-204ENST00000521283 MROH7-TTC4A0A0A0MT08 1334 aa12.45□□□□□ -0.42
TRIM35-204ENST00000521283 GPR75-ASB3A0A0A6YYF3 556 aa12.45□□□□□ -0.42
TRIM35-204ENST00000521283 PTPREP23469 700 aa12.45□□□□□ -0.42
TRIM35-204ENST00000521283 MCAMP43121 646 aa12.45□□□□□ -0.42
TRIM35-204ENST00000521283 MECOMQ03112 1051 aa12.45□□□□□ -0.42
TRIM35-204ENST00000521283 AAMPQ13685 434 aa12.45□□□□□ -0.42
TRIM35-204ENST00000521283 TTF1Q15361 905 aaPredicted RBP12.45□□□□□ -0.42
TRIM35-204ENST00000521283 DIXDC1Q155Q3 683 aa12.45□□□□□ -0.42
TRIM35-204ENST00000521283 MOB2Q70IA6 237 aa12.45□□□□□ -0.42
TRIM35-204ENST00000521283 RHPN1Q8TCX5 695 aa12.45□□□□□ -0.42
TRIM35-204ENST00000521283 NSUN4Q96CB9 384 aaKnown RBP12.45□□□□□ -0.42
TRIM35-204ENST00000521283 DBNDD2Q9BQY9 259 aa12.45□□□□□ -0.42
TRIM35-204ENST00000521283 ZNF341Q9BYN7 854 aa12.45□□□□□ -0.42
TRIM35-204ENST00000521283 RNF186Q9NXI6 227 aa12.45□□□□□ -0.42
TRIM35-204ENST00000521283 PCDHGA10Q9Y5H3 936 aa12.45□□□□□ -0.42
TRIM35-204ENST00000521283 SSC5DA1L4H1 1573 aa12.44□□□□□ -0.42
TRIM35-204ENST00000521283 WDHD1O75717 1129 aaPredicted RBP12.44□□□□□ -0.42
TRIM35-204ENST00000521283 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.44□□□□□ -0.42
TRIM35-204ENST00000521283 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.44□□□□□ -0.42
TRIM35-204ENST00000521283 RAI14Q9P0K7 980 aa12.44□□□□□ -0.42
TRIM35-204ENST00000521283 EXOC6BQ9Y2D4 811 aa12.44□□□□□ -0.42
TRIM35-204ENST00000521283 AOX1Q06278 1338 aa12.43□□□□□ -0.42
TRIM35-204ENST00000521283 DPYSL4O14531 572 aa12.43□□□□□ -0.42
TRIM35-204ENST00000521283 TRPA1O75762 1119 aa12.43□□□□□ -0.42
TRIM35-204ENST00000521283 IFIT2P09913 472 aaKnown RBP12.43□□□□□ -0.42
TRIM35-204ENST00000521283 BTDP43251 543 aa12.43□□□□□ -0.42
TRIM35-204ENST00000521283 NAA16Q6N069 864 aaPredicted RBP12.43□□□□□ -0.42
TRIM35-204ENST00000521283 AACSQ86V21 672 aa12.43□□□□□ -0.42
TRIM35-204ENST00000521283 EAF2Q96CJ1 260 aaPredicted RBP12.43□□□□□ -0.42
TRIM35-204ENST00000521283 WNK4Q96J92 1243 aa12.43□□□□□ -0.42
TRIM35-204ENST00000521283 SLC4A5Q9BY07 1137 aa12.43□□□□□ -0.42
TRIM35-204ENST00000521283 DBNLQ9UJU6 430 aaKnown RBP12.43□□□□□ -0.42
TRIM35-204ENST00000521283 COL2A1P02458 1487 aaPredicted RBP12.42□□□□□ -0.42
TRIM35-204ENST00000521283 TESPA1A2RU30 521 aaPredicted RBP12.42□□□□□ -0.42
TRIM35-204ENST00000521283 GTF2A2P52657 109 aa12.42□□□□□ -0.42
TRIM35-204ENST00000521283 CACNB3P54284 484 aa12.42□□□□□ -0.42
TRIM35-204ENST00000521283 MAP3K12Q12852 859 aa12.42□□□□□ -0.42
TRIM35-204ENST00000521283 ERO1BQ86YB8 467 aa12.42□□□□□ -0.42
TRIM35-204ENST00000521283 ZIC5Q96T25 663 aa12.42□□□□□ -0.42
TRIM35-204ENST00000521283 CCDC8Q9H0W5 538 aaPredicted RBP12.42□□□□□ -0.42
TRIM35-204ENST00000521283 ZCCHC17Q9NP64 241 aaKnown RBP12.42□□□□□ -0.42
TRIM35-204ENST00000521283 ZNF112Q9UJU3 913 aa12.42□□□□□ -0.42
TRIM35-204ENST00000521283 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.42□□□□□ -0.42
TRIM35-204ENST00000521283 MAST2Q6P0Q8 1798 aa12.42□□□□□ -0.42
TRIM35-204ENST00000521283 CYP2E1P05181 493 aaPredicted RBP12.41□□□□□ -0.42
TRIM35-204ENST00000521283 RGS3P49796 1198 aa12.41□□□□□ -0.42
TRIM35-204ENST00000521283 PPP4CP60510 307 aa12.41□□□□□ -0.42
TRIM35-204ENST00000521283 MAP3K10Q02779 954 aa12.41□□□□□ -0.42
TRIM35-204ENST00000521283 PPATQ06203 517 aa12.41□□□□□ -0.42
TRIM35-204ENST00000521283 TCP10Q12799 353 aa12.41□□□□□ -0.42
TRIM35-204ENST00000521283 VGLL4Q14135 290 aa12.41□□□□□ -0.42
TRIM35-204ENST00000521283 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.41□□□□□ -0.42
TRIM35-204ENST00000521283 OPTNQ96CV9 577 aa12.41□□□□□ -0.42
TRIM35-204ENST00000521283 WRNIP1Q96S55 665 aa12.41□□□□□ -0.42
TRIM35-204ENST00000521283 ZBED2Q9BTP6 218 aa12.41□□□□□ -0.42
TRIM35-204ENST00000521283 LRRCC1Q9C099 1032 aa12.41□□□□□ -0.42
TRIM35-204ENST00000521283 DHX36Q9H2U1 1008 aaKnown RBP12.41□□□□□ -0.42
TRIM35-204ENST00000521283 FAM198AQ9UFP1 575 aa12.41□□□□□ -0.42
TRIM35-204ENST00000521283 OTOFQ9HC10 1997 aa12.41□□□□□ -0.42
TRIM35-204ENST00000521283 CASP8AP2Q9UKL3 1982 aa12.41□□□□□ -0.42
TRIM35-204ENST00000521283 DOCK2Q92608 1830 aa12.41□□□□□ -0.42
TRIM35-204ENST00000521283 ATRNL1Q5VV63 1379 aa12.41□□□□□ -0.42
TRIM35-204ENST00000521283 SPDYE5A6NIY4 337 aa12.4□□□□□ -0.42
TRIM35-204ENST00000521283 NFIAQ12857 509 aa12.4□□□□□ -0.42
TRIM35-204ENST00000521283 PKN2Q16513 984 aaKnown RBP12.4□□□□□ -0.42
TRIM35-204ENST00000521283 NOL9Q5SY16 702 aaKnown RBP12.4□□□□□ -0.42
TRIM35-204ENST00000521283 TBC1D9Q6ZT07 1266 aa12.4□□□□□ -0.42
TRIM35-204ENST00000521283 ZSCAN29Q8IWY8 852 aaPredicted RBP12.4□□□□□ -0.42
TRIM35-204ENST00000521283 SIRT2Q8IXJ6 389 aa12.4□□□□□ -0.42
TRIM35-204ENST00000521283 CLMNQ96JQ2 1002 aa12.4□□□□□ -0.42
TRIM35-204ENST00000521283 TBC1D2Q9BYX2 928 aa12.4□□□□□ -0.42
TRIM35-204ENST00000521283 RFX7Q2KHR2 1363 aa12.4□□□□□ -0.42
TRIM35-204ENST00000521283 BHMG1C9JSJ3 638 aaPredicted RBP12.39□□□□□ -0.43
TRIM35-204ENST00000521283 CETPP11597 493 aa12.39□□□□□ -0.43
TRIM35-204ENST00000521283 ZAP70P43403 619 aa12.39□□□□□ -0.43
TRIM35-204ENST00000521283 RRP1P56182 461 aaKnown RBP12.39□□□□□ -0.43
TRIM35-204ENST00000521283 RHBDL3P58872 404 aa12.39□□□□□ -0.43
TRIM35-204ENST00000521283 PPIL2Q13356 520 aa12.39□□□□□ -0.43
TRIM35-204ENST00000521283 SNAPC2Q13487 334 aa12.39□□□□□ -0.43
TRIM35-204ENST00000521283 PI16Q6UXB8 463 aa12.39□□□□□ -0.43
TRIM35-204ENST00000521283 DCTPP1Q9H773 170 aa12.39□□□□□ -0.43
TRIM35-204ENST00000521283 ELP3Q9H9T3 547 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms